RNA–Protein interactions for RNA: ENST00000489892.1

TRIM40-208, Transcript of tripartite motif containing 40, humanhuman

TSL 3

Gene TRIM40, Length 941 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM40-208ENST00000489892 A0A1W2PS18 150 aa9□□□□□ -0.97
TRIM40-208ENST00000489892 H3BRN7 92 aa9□□□□□ -0.97
TRIM40-208ENST00000489892 IGHV3-11P01762 117 aa9□□□□□ -0.97
TRIM40-208ENST00000489892 RPLP1P05386 114 aaKnown RBP9□□□□□ -0.97
TRIM40-208ENST00000489892 RPL7P18124 248 aaKnown RBP9□□□□□ -0.97
TRIM40-208ENST00000489892 SRSF2Q01130 221 aaKnown RBP9□□□□□ -0.97
TRIM40-208ENST00000489892 DEFA6Q01524 100 aa9□□□□□ -0.97
TRIM40-208ENST00000489892 C1orf194Q5T5A4 169 aa9□□□□□ -0.97
TRIM40-208ENST00000489892 TOMM20LQ6UXN7 152 aa9□□□□□ -0.97
TRIM40-208ENST00000489892 BPIFA4PQ86YQ2 179 aa9□□□□□ -0.97
TRIM40-208ENST00000489892 LINC01006Q8NI28 216 aa9□□□□□ -0.97
TRIM40-208ENST00000489892 C4orf3Q8WVX3 66 aa9□□□□□ -0.97
TRIM40-208ENST00000489892 PAXXQ9BUH6 204 aa9□□□□□ -0.97
TRIM40-208ENST00000489892 SLC25A39Q9BZJ4 359 aaPredicted RBP9□□□□□ -0.97
TRIM40-208ENST00000489892 TENM1Q9UKZ4 2725 aa8.99□□□□□ -0.97
TRIM40-208ENST00000489892 K7EN84 100 aa8.99□□□□□ -0.97
TRIM40-208ENST00000489892 ERVFC1-1P60608 527 aa8.99□□□□□ -0.97
TRIM40-208ENST00000489892 PDZD11Q5EBL8 140 aa8.99□□□□□ -0.97
TRIM40-208ENST00000489892 KHDC1LQ5JSQ8 128 aa8.99□□□□□ -0.97
TRIM40-208ENST00000489892 PATE2Q6UY27 113 aa8.99□□□□□ -0.97
TRIM40-208ENST00000489892 GPHB5Q86YW7 130 aa8.99□□□□□ -0.97
TRIM40-208ENST00000489892 OR4F17Q8NGA8 305 aa8.99□□□□□ -0.97
TRIM40-208ENST00000489892 ZNF503Q96F45 646 aa8.99□□□□□ -0.97
TRIM40-208ENST00000489892 SLC25A2Q9BXI2 301 aa8.99□□□□□ -0.97
TRIM40-208ENST00000489892 UFC1Q9Y3C8 167 aa8.99□□□□□ -0.97
TRIM40-208ENST00000489892 RNF114Q9Y508 228 aa8.99□□□□□ -0.97
TRIM40-208ENST00000489892 V9GYV3 84 aa8.99□□□□□ -0.97
TRIM40-208ENST00000489892 GGTLC3B5MD39 225 aa8.98□□□□□ -0.97
TRIM40-208ENST00000489892 K7EMT4 169 aa8.98□□□□□ -0.97
TRIM40-208ENST00000489892 HLA-DQA1P01909 254 aa8.98□□□□□ -0.97
TRIM40-208ENST00000489892 CRYBB3P26998 211 aa8.98□□□□□ -0.97
TRIM40-208ENST00000489892 Q0VG73 95 aa8.98□□□□□ -0.97
TRIM40-208ENST00000489892 USF2Q15853 346 aaPredicted RBP8.98□□□□□ -0.97
TRIM40-208ENST00000489892 IBA57Q5T440 356 aaKnown RBP8.98□□□□□ -0.97
TRIM40-208ENST00000489892 WIPF2Q8TF74 440 aaPredicted RBP8.98□□□□□ -0.97
TRIM40-208ENST00000489892 DPF1Q92782 380 aa8.98□□□□□ -0.97
TRIM40-208ENST00000489892 FAM167A-AS1Q96KT0 104 aa8.98□□□□□ -0.97
TRIM40-208ENST00000489892 IGF2BP2-AS1Q96M15 143 aa8.98□□□□□ -0.97
TRIM40-208ENST00000489892 MRPL18Q9H0U6 180 aaKnown RBP8.98□□□□□ -0.97
TRIM40-208ENST00000489892 ZFAND3Q9H8U3 227 aa8.98□□□□□ -0.97
TRIM40-208ENST00000489892 DAZ1Q9NQZ3 744 aaKnown RBP8.98□□□□□ -0.97
TRIM40-208ENST00000489892 TSSC4Q9Y5U2 329 aaPredicted RBP8.98□□□□□ -0.97
TRIM40-208ENST00000489892 PEX7O00628 323 aa8.97□□□□□ -0.97
TRIM40-208ENST00000489892 GZMBP10144 247 aa8.97□□□□□ -0.97
TRIM40-208ENST00000489892 HIST1H1EP10412 219 aaKnown RBP8.97□□□□□ -0.97
TRIM40-208ENST00000489892 CRISP2P16562 243 aa8.97□□□□□ -0.97
TRIM40-208ENST00000489892 PDE6HQ13956 83 aa8.97□□□□□ -0.97
TRIM40-208ENST00000489892 OR10J3Q5JRS4 329 aa8.97□□□□□ -0.97
TRIM40-208ENST00000489892 SAMD13Q5VXD3 122 aa8.97□□□□□ -0.97
TRIM40-208ENST00000489892 REC114Q7Z4M0 266 aa8.97□□□□□ -0.97
TRIM40-208ENST00000489892 OR8I2Q8N0Y5 310 aa8.97□□□□□ -0.97
TRIM40-208ENST00000489892 CMTM2Q8TAZ6 248 aa8.97□□□□□ -0.97
TRIM40-208ENST00000489892 SMIM27A0A1W2PRY6 76 aa8.96□□□□□ -0.98
TRIM40-208ENST00000489892 IZUMO1RA6ND01 250 aa8.96□□□□□ -0.98
TRIM40-208ENST00000489892 PGPEP1LA6NFU8 196 aa8.96□□□□□ -0.98
TRIM40-208ENST00000489892 LINC01619G3V211 115 aa8.96□□□□□ -0.98
TRIM40-208ENST00000489892 M0QZ24 198 aa8.96□□□□□ -0.98
TRIM40-208ENST00000489892 LGALS9O00182 355 aa8.96□□□□□ -0.98
TRIM40-208ENST00000489892 DDTP30046 118 aa8.96□□□□□ -0.98
TRIM40-208ENST00000489892 PROK1P58294 105 aa8.96□□□□□ -0.98
TRIM40-208ENST00000489892 SUMO1P63165 101 aaKnown RBP8.96□□□□□ -0.98
TRIM40-208ENST00000489892 C10orf99Q6UWK7 81 aa8.96□□□□□ -0.98
TRIM40-208ENST00000489892 LCNL1Q6ZST4 164 aa8.96□□□□□ -0.98
TRIM40-208ENST00000489892 ATP5L2Q7Z4Y8 100 aa8.96□□□□□ -0.98
TRIM40-208ENST00000489892 IGHV3-35A0A0C4DH35 117 aa8.95□□□□□ -0.98
TRIM40-208ENST00000489892 A8MWP6 167 aa8.95□□□□□ -0.98
TRIM40-208ENST00000489892 SNURFLB1AK76 121 aa8.95□□□□□ -0.98
TRIM40-208ENST00000489892 TRBV12-3P01733 135 aa8.95□□□□□ -0.98
TRIM40-208ENST00000489892 NBEAP1P0C6P0 100 aa8.95□□□□□ -0.98
TRIM40-208ENST00000489892 GP9P14770 177 aa8.95□□□□□ -0.98
TRIM40-208ENST00000489892 TMEM183BQ1AE95 376 aa8.95□□□□□ -0.98
TRIM40-208ENST00000489892 CT83Q5H943 113 aa8.95□□□□□ -0.98
TRIM40-208ENST00000489892 FAM162BQ5T6X4 162 aa8.95□□□□□ -0.98
TRIM40-208ENST00000489892 MRPL52Q86TS9 123 aaKnown RBP8.95□□□□□ -0.98
TRIM40-208ENST00000489892 LYPD1Q8N2G4 141 aa8.95□□□□□ -0.98
TRIM40-208ENST00000489892 KLHL30-AS1Q8NEE0 82 aa8.95□□□□□ -0.98
TRIM40-208ENST00000489892 FMC1Q96HJ9 113 aa8.95□□□□□ -0.98
TRIM40-208ENST00000489892 CLEC5AQ9NY25 188 aa8.95□□□□□ -0.98
TRIM40-208ENST00000489892 PEMTQ9UBM1 199 aa8.95□□□□□ -0.98
TRIM40-208ENST00000489892 TRAV5A0A0B4J249 113 aa8.94□□□□□ -0.98
TRIM40-208ENST00000489892 TRBV6-1A0A0K0K1D8 114 aa8.94□□□□□ -0.98
TRIM40-208ENST00000489892 BUB3O43684 328 aa8.94□□□□□ -0.98
TRIM40-208ENST00000489892 ZNF253O75346 499 aa8.94□□□□□ -0.98
TRIM40-208ENST00000489892 IGLV2-8P01709 118 aa8.94□□□□□ -0.98
TRIM40-208ENST00000489892 HOXD3P31249 432 aaPredicted RBP8.94□□□□□ -0.98
TRIM40-208ENST00000489892 MYCNOSP40205 109 aa8.94□□□□□ -0.98
TRIM40-208ENST00000489892 UBE2G1P62253 170 aa8.94□□□□□ -0.98
TRIM40-208ENST00000489892 PSG9Q00887 426 aa8.94□□□□□ -0.98
TRIM40-208ENST00000489892 HIST2H2BDQ6DRA6 164 aa8.94□□□□□ -0.98
TRIM40-208ENST00000489892 C5orf17Q8NAS9 161 aa8.94□□□□□ -0.98
TRIM40-208ENST00000489892 OR1N2Q8NGR9 330 aa8.94□□□□□ -0.98
TRIM40-208ENST00000489892 FXYD5Q96DB9 178 aa8.94□□□□□ -0.98
TRIM40-208ENST00000489892 AURKAIP1Q9NWT8 199 aaPredicted RBP8.94□□□□□ -0.98
TRIM40-208ENST00000489892 ZNF492Q9P255 531 aa8.94□□□□□ -0.98
TRIM40-208ENST00000489892 U3KQE9 123 aa8.94□□□□□ -0.98
TRIM40-208ENST00000489892 MGAM2Q2M2H8 2515 aa8.93□□□□□ -0.98
TRIM40-208ENST00000489892 IGHV7-4-1A0A0J9YVY3 117 aa8.93□□□□□ -0.98
TRIM40-208ENST00000489892 ZNF705GA8MUZ8 300 aaPredicted RBP8.93□□□□□ -0.98
TRIM40-208ENST00000489892 SLC17A3O00476 420 aa8.93□□□□□ -0.98
TRIM40-208ENST00000489892 RAB4BP61018 213 aa8.93□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 57.4 ms