RNA–Protein interactions for RNA: ENST00000489853.1

SNRNP40-206, Transcript of small nuclear ribonucleoprotein U5 subunit 40, humanhuman

TSL 2

Gene SNRNP40, Length 1,928 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP40-206ENST00000489853 RNF125Q96EQ8 232 aa3.78□□□□□ -1.81
SNRNP40-206ENST00000489853 LINC01587Q99440 93 aa3.78□□□□□ -1.81
SNRNP40-206ENST00000489853 RTL8AQ9BWD3 113 aa3.78□□□□□ -1.81
SNRNP40-206ENST00000489853 IFI27L2Q9H2X8 130 aa3.78□□□□□ -1.81
SNRNP40-206ENST00000489853 AGRNO00468 2067 aa3.77□□□□□ -1.81
SNRNP40-206ENST00000489853 ZNF318Q5VUA4 2279 aa3.77□□□□□ -1.81
SNRNP40-206ENST00000489853 HCFC1P51610 2035 aa3.77□□□□□ -1.81
SNRNP40-206ENST00000489853 LOC107984156A0A0G2JMH3 177 aa3.77□□□□□ -1.81
SNRNP40-206ENST00000489853 NCBP2LA6PVI3 153 aaKnown RBP3.77□□□□□ -1.81
SNRNP40-206ENST00000489853 SPINT2O43291 252 aa3.77□□□□□ -1.81
SNRNP40-206ENST00000489853 CRLF1O75462 422 aa3.77□□□□□ -1.81
SNRNP40-206ENST00000489853 CEACAM4O75871 244 aa3.77□□□□□ -1.81
SNRNP40-206ENST00000489853 FSTL3O95633 263 aa3.77□□□□□ -1.81
SNRNP40-206ENST00000489853 TCRAP04437 139 aa3.77□□□□□ -1.81
SNRNP40-206ENST00000489853 GFERP55789 205 aa3.77□□□□□ -1.81
SNRNP40-206ENST00000489853 RPS28P62857 69 aaKnown RBP3.77□□□□□ -1.81
SNRNP40-206ENST00000489853 PRCDQ00LT1 54 aa3.77□□□□□ -1.81
SNRNP40-206ENST00000489853 C1orf61Q13536 156 aa3.77□□□□□ -1.81
SNRNP40-206ENST00000489853 SPRNQ5BIV9 151 aa3.77□□□□□ -1.81
SNRNP40-206ENST00000489853 PATE2Q6UY27 113 aa3.77□□□□□ -1.81
SNRNP40-206ENST00000489853 ZFP2Q6ZN57 461 aa3.77□□□□□ -1.81
SNRNP40-206ENST00000489853 ARL17AQ8IVW1 177 aa3.77□□□□□ -1.81
SNRNP40-206ENST00000489853 C1orf210Q8IVY1 113 aa3.77□□□□□ -1.81
SNRNP40-206ENST00000489853 ANKRD29Q8N6D5 301 aa3.77□□□□□ -1.81
SNRNP40-206ENST00000489853 OR1L8Q8NGR8 309 aa3.77□□□□□ -1.81
SNRNP40-206ENST00000489853 SRSF12Q8WXF0 261 aaKnown RBP3.77□□□□□ -1.81
SNRNP40-206ENST00000489853 SGK494Q96LW2 274 aa3.77□□□□□ -1.81
SNRNP40-206ENST00000489853 TRGV9Q99603 122 aa3.77□□□□□ -1.81
SNRNP40-206ENST00000489853 TPPP3Q9BW30 176 aa3.77□□□□□ -1.81
SNRNP40-206ENST00000489853 SRXN1Q9BYN0 137 aa3.77□□□□□ -1.81
SNRNP40-206ENST00000489853 MED12Q93074 2177 aa3.77□□□□□ -1.81
SNRNP40-206ENST00000489853 CNTRLQ7Z7A1 2325 aa3.76□□□□□ -1.81
SNRNP40-206ENST00000489853 TRAV8-2A0A0B4J237 113 aa3.76□□□□□ -1.81
SNRNP40-206ENST00000489853 SPTY2D1-AS1A0A0U1RR47 76 aa3.76□□□□□ -1.81
SNRNP40-206ENST00000489853 A0A1B0GX51 115 aa3.76□□□□□ -1.81
SNRNP40-206ENST00000489853 LINC01549A6NIU2 74 aa3.76□□□□□ -1.81
SNRNP40-206ENST00000489853 DEFB108AA8MXU0 73 aa3.76□□□□□ -1.81
SNRNP40-206ENST00000489853 DUSP14O95147 198 aaKnown RBP3.76□□□□□ -1.81
SNRNP40-206ENST00000489853 CFIP05156 583 aa3.76□□□□□ -1.81
SNRNP40-206ENST00000489853 UBE2D1P51668 147 aa3.76□□□□□ -1.81
SNRNP40-206ENST00000489853 FXYD7P58549 80 aa3.76□□□□□ -1.81
SNRNP40-206ENST00000489853 ALKBH6Q3KRA9 238 aa3.76□□□□□ -1.81
SNRNP40-206ENST00000489853 Q86TA4 180 aa3.76□□□□□ -1.81
SNRNP40-206ENST00000489853 SLC22A18ASQ8N1D0 253 aa3.76□□□□□ -1.81
SNRNP40-206ENST00000489853 LINC00482Q8N8I6 264 aa3.76□□□□□ -1.81
SNRNP40-206ENST00000489853 LINC01600Q96MT4 127 aa3.76□□□□□ -1.81
SNRNP40-206ENST00000489853 NGBQ9NPG2 151 aa3.76□□□□□ -1.81
SNRNP40-206ENST00000489853 CHCHD2Q9Y6H1 151 aaPredicted RBP3.76□□□□□ -1.81
SNRNP40-206ENST00000489853 TET2Q6N021 2002 aaPredicted RBP3.76□□□□□ -1.81
SNRNP40-206ENST00000489853 ASCC3Q8N3C0 2202 aaKnown RBP3.76□□□□□ -1.81
SNRNP40-206ENST00000489853 CABIN1Q9Y6J0 2220 aa3.76□□□□□ -1.81
SNRNP40-206ENST00000489853 IGLV3-12A0A075B6K2 115 aa3.76□□□□□ -1.81
SNRNP40-206ENST00000489853 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa3.76□□□□□ -1.81
SNRNP40-206ENST00000489853 IGHV3-43A0A0B4J1X8 118 aa3.76□□□□□ -1.81
SNRNP40-206ENST00000489853 LINC01548A6NM66 108 aa3.76□□□□□ -1.81
SNRNP40-206ENST00000489853 C15orf65H3BRN8 121 aa3.76□□□□□ -1.81
SNRNP40-206ENST00000489853 J3KT08 172 aa3.76□□□□□ -1.81
SNRNP40-206ENST00000489853 TCL1BO95988 128 aa3.76□□□□□ -1.81
SNRNP40-206ENST00000489853 TGFAP01135 160 aa3.76□□□□□ -1.81
SNRNP40-206ENST00000489853 LINC00694P0DN24 101 aa3.76□□□□□ -1.81
SNRNP40-206ENST00000489853 IGHV3-43DP0DP04 118 aa3.76□□□□□ -1.81
SNRNP40-206ENST00000489853 RNASE2P10153 161 aaKnown RBP3.76□□□□□ -1.81
SNRNP40-206ENST00000489853 LIFP15018 202 aa3.76□□□□□ -1.81
SNRNP40-206ENST00000489853 CKS2P33552 79 aa3.76□□□□□ -1.81
SNRNP40-206ENST00000489853 LEPP41159 167 aa3.76□□□□□ -1.81
SNRNP40-206ENST00000489853 DEFB103AP81534 67 aa3.76□□□□□ -1.81
SNRNP40-206ENST00000489853 MLANAQ16655 118 aa3.76□□□□□ -1.81
SNRNP40-206ENST00000489853 MRPL51Q4U2R6 128 aaKnown RBP3.76□□□□□ -1.81
SNRNP40-206ENST00000489853 C15orf53Q8NAA6 179 aa3.76□□□□□ -1.81
SNRNP40-206ENST00000489853 OR13C6PQ8NH95 151 aa3.76□□□□□ -1.81
SNRNP40-206ENST00000489853 RFESDQ8TAC1 157 aa3.76□□□□□ -1.81
SNRNP40-206ENST00000489853 ODF3Q96PU9 254 aa3.76□□□□□ -1.81
SNRNP40-206ENST00000489853 FOXC2Q99958 501 aa3.76□□□□□ -1.81
SNRNP40-206ENST00000489853 FAM173AQ9BQD7 235 aa3.76□□□□□ -1.81
SNRNP40-206ENST00000489853 AKIRIN1Q9H9L7 192 aaPredicted RBP3.76□□□□□ -1.81
SNRNP40-206ENST00000489853 NXT2Q9NPJ8 142 aaKnown RBP3.76□□□□□ -1.81
SNRNP40-206ENST00000489853 OTORQ9NRC9 128 aa3.76□□□□□ -1.81
SNRNP40-206ENST00000489853 LRP4O75096 1905 aa3.75□□□□□ -1.81
SNRNP40-206ENST00000489853 CEP192Q8TEP8 1941 aa3.75□□□□□ -1.81
SNRNP40-206ENST00000489853 FRYLO94915 3013 aa3.75□□□□□ -1.81
SNRNP40-206ENST00000489853 DMXL1Q9Y485 3027 aa3.75□□□□□ -1.81
SNRNP40-206ENST00000489853 TRAV8-4A0A0B4J246 113 aa3.75□□□□□ -1.81
SNRNP40-206ENST00000489853 TRAV40A0A0B4J280 105 aa3.75□□□□□ -1.81
SNRNP40-206ENST00000489853 C9JAW5 83 aa3.75□□□□□ -1.81
SNRNP40-206ENST00000489853 H3BVH4 76 aa3.75□□□□□ -1.81
SNRNP40-206ENST00000489853 UPK2O00526 184 aa3.75□□□□□ -1.81
SNRNP40-206ENST00000489853 IGLV2-11P01706 119 aa3.75□□□□□ -1.81
SNRNP40-206ENST00000489853 PLNP26678 52 aa3.75□□□□□ -1.81
SNRNP40-206ENST00000489853 GLRXP35754 106 aa3.75□□□□□ -1.81
SNRNP40-206ENST00000489853 CCL11P51671 97 aa3.75□□□□□ -1.81
SNRNP40-206ENST00000489853 Q6ZQT7 251 aa3.75□□□□□ -1.81
SNRNP40-206ENST00000489853 LINC00305Q7Z4B0 112 aa3.75□□□□□ -1.81
SNRNP40-206ENST00000489853 OR11H6Q8NGC7 330 aa3.75□□□□□ -1.81
SNRNP40-206ENST00000489853 OR13A1Q8NGR1 328 aa3.75□□□□□ -1.81
SNRNP40-206ENST00000489853 DEFB126Q9BYW3 111 aa3.75□□□□□ -1.81
SNRNP40-206ENST00000489853 SLC25A39Q9BZJ4 359 aaPredicted RBP3.75□□□□□ -1.81
SNRNP40-206ENST00000489853 SPRY4Q9C004 299 aa3.75□□□□□ -1.81
SNRNP40-206ENST00000489853 Q9H3A6 140 aa3.75□□□□□ -1.81
SNRNP40-206ENST00000489853 AAMDCQ9H7C9 122 aa3.75□□□□□ -1.81
SNRNP40-206ENST00000489853 UBTD1Q9HAC8 227 aa3.75□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 70.3 ms