RNA–Protein interactions for RNA: ENST00000489656.5

VPS26A-205, Transcript of VPS26, retromer complex component A, humanhuman

TSL 5

Gene VPS26A, Length 817 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS26A-205ENST00000489656 SVBPQ8N300 66 aa10.68□□□□□ -0.7
VPS26A-205ENST00000489656 DCANP1Q8TF63 244 aa10.68□□□□□ -0.7
VPS26A-205ENST00000489656 NIPSNAP3BQ9BS92 247 aa10.68□□□□□ -0.7
VPS26A-205ENST00000489656 DERL1Q9BUN8 251 aa10.68□□□□□ -0.7
VPS26A-205ENST00000489656 TRAV2A0A0B4J234 112 aa10.67□□□□□ -0.7
VPS26A-205ENST00000489656 TRBV6-1A0A0K0K1D8 114 aa10.67□□□□□ -0.7
VPS26A-205ENST00000489656 DIRC3C9JPN6 131 aa10.67□□□□□ -0.7
VPS26A-205ENST00000489656 M0R3E3 92 aa10.67□□□□□ -0.7
VPS26A-205ENST00000489656 RPL35P42766 123 aaKnown RBP10.67□□□□□ -0.7
VPS26A-205ENST00000489656 CSN1S1P47710 185 aa10.67□□□□□ -0.7
VPS26A-205ENST00000489656 CNN1P51911 297 aaKnown RBP10.67□□□□□ -0.7
VPS26A-205ENST00000489656 GNG5P63218 68 aa10.67□□□□□ -0.7
VPS26A-205ENST00000489656 GUCA2BQ16661 112 aa10.67□□□□□ -0.7
VPS26A-205ENST00000489656 C16orf92Q96LL3 132 aa10.67□□□□□ -0.7
VPS26A-205ENST00000489656 ZNF747Q9BV97 191 aa10.67□□□□□ -0.7
VPS26A-205ENST00000489656 NAT8Q9UHE5 227 aa10.67□□□□□ -0.7
VPS26A-205ENST00000489656 LY96Q9Y6Y9 160 aa10.67□□□□□ -0.7
VPS26A-205ENST00000489656 TRAV25A0A0B4J276 109 aa10.66□□□□□ -0.7
VPS26A-205ENST00000489656 FBLL1A6NHQ2 334 aaKnown RBP10.66□□□□□ -0.7
VPS26A-205ENST00000489656 RPL11P62913 178 aaKnown RBP10.66□□□□□ -0.7
VPS26A-205ENST00000489656 PNRC1Q12796 327 aaPredicted RBP10.66□□□□□ -0.7
VPS26A-205ENST00000489656 PSG3Q16557 428 aa10.66□□□□□ -0.7
VPS26A-205ENST00000489656 TMEM183BQ1AE95 376 aa10.66□□□□□ -0.7
VPS26A-205ENST00000489656 TMEM241Q24JQ0 296 aa10.66□□□□□ -0.7
VPS26A-205ENST00000489656 ZNF674Q2M3X9 581 aa10.66□□□□□ -0.7
VPS26A-205ENST00000489656 LINC00482Q8N8I6 264 aa10.66□□□□□ -0.7
VPS26A-205ENST00000489656 TMEM75Q8N9X5 138 aa10.66□□□□□ -0.7
VPS26A-205ENST00000489656 TVP23CQ96ET8 276 aa10.66□□□□□ -0.7
VPS26A-205ENST00000489656 FMC1Q96HJ9 113 aa10.66□□□□□ -0.7
VPS26A-205ENST00000489656 IGF2BP2-AS1Q96M15 143 aa10.66□□□□□ -0.7
VPS26A-205ENST00000489656 MS4A6AQ9H2W1 248 aa10.66□□□□□ -0.7
VPS26A-205ENST00000489656 SDF2L1Q9HCN8 221 aa10.66□□□□□ -0.7
VPS26A-205ENST00000489656 TRBV20OR9-2A0A075B6H5 130 aa10.65□□□□□ -0.7
VPS26A-205ENST00000489656 K7EQG2 157 aa10.65□□□□□ -0.7
VPS26A-205ENST00000489656 K7EQM0 130 aa10.65□□□□□ -0.7
VPS26A-205ENST00000489656 TSPAN4O14817 238 aa10.65□□□□□ -0.7
VPS26A-205ENST00000489656 SNAPINO95295 136 aa10.65□□□□□ -0.7
VPS26A-205ENST00000489656 PF4P02776 101 aa10.65□□□□□ -0.7
VPS26A-205ENST00000489656 HLA-DMBP28068 263 aa10.65□□□□□ -0.7
VPS26A-205ENST00000489656 ID1P41134 155 aa10.65□□□□□ -0.7
VPS26A-205ENST00000489656 DEFB114Q30KQ6 69 aa10.65□□□□□ -0.7
VPS26A-205ENST00000489656 LCN12Q6JVE5 192 aa10.65□□□□□ -0.7
VPS26A-205ENST00000489656 DYNLRB2Q8TF09 96 aa10.65□□□□□ -0.7
VPS26A-205ENST00000489656 TMEM158Q8WZ71 300 aa10.65□□□□□ -0.7
VPS26A-205ENST00000489656 RBAKDNA6NC62 111 aa10.64□□□□□ -0.71
VPS26A-205ENST00000489656 IGLV2-11P01706 119 aa10.64□□□□□ -0.71
VPS26A-205ENST00000489656 PAFAH1B2P68402 229 aa10.64□□□□□ -0.71
VPS26A-205ENST00000489656 CENPWQ5EE01 88 aa10.64□□□□□ -0.71
VPS26A-205ENST00000489656 IGFL4Q6B9Z1 124 aa10.64□□□□□ -0.71
VPS26A-205ENST00000489656 GOLT1AQ6ZVE7 132 aa10.64□□□□□ -0.71
VPS26A-205ENST00000489656 RNF182Q8N6D2 247 aa10.64□□□□□ -0.71
VPS26A-205ENST00000489656 SMIM12Q96EX1 92 aa10.64□□□□□ -0.71
VPS26A-205ENST00000489656 RPH3ALQ9UNE2 315 aa10.64□□□□□ -0.71
VPS26A-205ENST00000489656 FBN1P35555 2871 aaKnown RBP10.64□□□□□ -0.71
VPS26A-205ENST00000489656 SORL1Q92673 2214 aa10.64□□□□□ -0.71
VPS26A-205ENST00000489656 GNG4P50150 75 aa10.63□□□□□ -0.71
VPS26A-205ENST00000489656 UBE2G1P62253 170 aa10.63□□□□□ -0.71
VPS26A-205ENST00000489656 RPL23P62829 140 aaKnown RBP10.63□□□□□ -0.71
VPS26A-205ENST00000489656 TMEM61Q8N0U2 210 aa10.63□□□□□ -0.71
VPS26A-205ENST00000489656 CLRN3Q8NCR9 226 aa10.63□□□□□ -0.71
VPS26A-205ENST00000489656 OR2K2Q8NGT1 345 aa10.63□□□□□ -0.71
VPS26A-205ENST00000489656 C20orf173Q96LM9 149 aa10.63□□□□□ -0.71
VPS26A-205ENST00000489656 LINC00479Q96M42 142 aa10.63□□□□□ -0.71
VPS26A-205ENST00000489656 IGKV3-7A0A075B6H7 116 aa10.62□□□□□ -0.71
VPS26A-205ENST00000489656 TRAV34A0A0B4J273 112 aa10.62□□□□□ -0.71
VPS26A-205ENST00000489656 ZNF705FA8MVS1 300 aaPredicted RBP10.62□□□□□ -0.71
VPS26A-205ENST00000489656 B4DEV8 164 aa10.62□□□□□ -0.71
VPS26A-205ENST00000489656 DNASE2O00115 360 aaPredicted RBP10.62□□□□□ -0.71
VPS26A-205ENST00000489656 LTAP01374 205 aa10.62□□□□□ -0.71
VPS26A-205ENST00000489656 IGLV2-8P01709 118 aa10.62□□□□□ -0.71
VPS26A-205ENST00000489656 FLI1Q01543 452 aaPredicted RBP10.62□□□□□ -0.71
VPS26A-205ENST00000489656 RHEBQ15382 184 aa10.62□□□□□ -0.71
VPS26A-205ENST00000489656 CD300EQ496F6 205 aaPredicted RBP10.62□□□□□ -0.71
VPS26A-205ENST00000489656 RBPMS2Q6ZRY4 209 aaKnown RBP10.62□□□□□ -0.71
VPS26A-205ENST00000489656 Q86TA4 180 aa10.62□□□□□ -0.71
VPS26A-205ENST00000489656 LINC01551Q86U37 167 aa10.62□□□□□ -0.71
VPS26A-205ENST00000489656 GBGT1Q8N5D6 347 aa10.62□□□□□ -0.71
VPS26A-205ENST00000489656 SPAG8Q99932 426 aaPredicted RBP10.62□□□□□ -0.71
VPS26A-205ENST00000489656 PRAC2D3DTV9 90 aa10.61□□□□□ -0.71
VPS26A-205ENST00000489656 IGLV1-51P01701 117 aa10.61□□□□□ -0.71
VPS26A-205ENST00000489656 SNRPD3P62318 126 aaKnown RBP10.61□□□□□ -0.71
VPS26A-205ENST00000489656 SHISA2Q6UWI4 295 aa10.61□□□□□ -0.71
VPS26A-205ENST00000489656 C9orf47Q6ZRZ4 202 aa10.61□□□□□ -0.71
VPS26A-205ENST00000489656 ZNF738Q8NE65 137 aa10.61□□□□□ -0.71
VPS26A-205ENST00000489656 OCC1Q8TAD7 63 aa10.61□□□□□ -0.71
VPS26A-205ENST00000489656 MLST8Q9BVC4 326 aa10.61□□□□□ -0.71
VPS26A-205ENST00000489656 PPP1R14DQ9NXH3 145 aa10.61□□□□□ -0.71
VPS26A-205ENST00000489656 PSG8Q9UQ74 426 aa10.61□□□□□ -0.71
VPS26A-205ENST00000489656 SELENOKQ9Y6D0 94 aa10.61□□□□□ -0.71
VPS26A-205ENST00000489656 AGRNO00468 2067 aa10.61□□□□□ -0.71
VPS26A-205ENST00000489656 IGKV2-40A0A087WW87 121 aaPredicted RBP10.6□□□□□ -0.71
VPS26A-205ENST00000489656 TRAV8-1A0A0A6YYK1 113 aa10.6□□□□□ -0.71
VPS26A-205ENST00000489656 M0R036 132 aa10.6□□□□□ -0.71
VPS26A-205ENST00000489656 SAP30O75446 220 aa10.6□□□□□ -0.71
VPS26A-205ENST00000489656 IGKV2D-40P01614 121 aaPredicted RBP10.6□□□□□ -0.71
VPS26A-205ENST00000489656 ADIRFQ15847 76 aa10.6□□□□□ -0.71
VPS26A-205ENST00000489656 C12orf54Q6X4T0 127 aa10.6□□□□□ -0.71
VPS26A-205ENST00000489656 BAGE2Q86Y30 109 aa10.6□□□□□ -0.71
VPS26A-205ENST00000489656 ZFP30Q9Y2G7 519 aa10.6□□□□□ -0.71
VPS26A-205ENST00000489656 VWFP04275 2813 aa10.59□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms