RNA–Protein interactions for RNA: ENST00000489540.1

MDC1-206, Transcript of mediator of DNA damage checkpoint 1, humanhuman

TSL 2

Gene MDC1, Length 1,402 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MDC1-206ENST00000489540 AAMDCQ9H7C9 122 aa12.53□□□□□ -0.4
MDC1-206ENST00000489540 TMEM189A5PLL7 270 aa12.52□□□□□ -0.41
MDC1-206ENST00000489540 PRAC2D3DTV9 90 aa12.52□□□□□ -0.41
MDC1-206ENST00000489540 M0R2Z0 102 aa12.52□□□□□ -0.41
MDC1-206ENST00000489540 OR7C2O60412 319 aa12.52□□□□□ -0.41
MDC1-206ENST00000489540 INSP01308 110 aa12.52□□□□□ -0.41
MDC1-206ENST00000489540 KHDC3LQ587J8 217 aa12.52□□□□□ -0.41
MDC1-206ENST00000489540 CEMP1Q6PRD7 247 aaPredicted RBP12.52□□□□□ -0.41
MDC1-206ENST00000489540 HSD17B11Q8NBQ5 300 aa12.52□□□□□ -0.41
MDC1-206ENST00000489540 OR2G3Q8NGZ4 309 aa12.52□□□□□ -0.41
MDC1-206ENST00000489540 FXYD5Q96DB9 178 aa12.52□□□□□ -0.41
MDC1-206ENST00000489540 PSMG3Q9BT73 122 aaPredicted RBP12.52□□□□□ -0.41
MDC1-206ENST00000489540 RFNGQ9Y644 331 aa12.52□□□□□ -0.41
MDC1-206ENST00000489540 BORCS7-ASMTA0A0B4J1R7 106 aa12.51□□□□□ -0.41
MDC1-206ENST00000489540 A0A1W2PPV4 95 aa12.51□□□□□ -0.41
MDC1-206ENST00000489540 RNF222A6NCQ9 220 aa12.51□□□□□ -0.41
MDC1-206ENST00000489540 CRXO43186 299 aaPredicted RBP12.51□□□□□ -0.41
MDC1-206ENST00000489540 OR10J4P0C629 311 aa12.51□□□□□ -0.41
MDC1-206ENST00000489540 TSPOP30536 169 aa12.51□□□□□ -0.41
MDC1-206ENST00000489540 NANOS2P60321 138 aaKnown RBP12.51□□□□□ -0.41
MDC1-206ENST00000489540 SERF2P84101 59 aa12.51□□□□□ -0.41
MDC1-206ENST00000489540 TMEM208Q9BTX3 173 aa12.51□□□□□ -0.41
MDC1-206ENST00000489540 KLK5Q9Y337 293 aaPredicted RBP12.51□□□□□ -0.41
MDC1-206ENST00000489540 KMT2CQ8NEZ4 4911 aaKnown RBP12.51□□□□□ -0.41
MDC1-206ENST00000489540 G3V3Q6 166 aa12.5□□□□□ -0.41
MDC1-206ENST00000489540 HBE1P02100 147 aa12.5□□□□□ -0.41
MDC1-206ENST00000489540 MBP02144 154 aa12.5□□□□□ -0.41
MDC1-206ENST00000489540 ATP6V0CP27449 155 aa12.5□□□□□ -0.41
MDC1-206ENST00000489540 CDKN1BP46527 198 aa12.5□□□□□ -0.41
MDC1-206ENST00000489540 LYPD1Q8N2G4 141 aa12.5□□□□□ -0.41
MDC1-206ENST00000489540 EXOC3-AS1Q8N2X6 119 aa12.5□□□□□ -0.41
MDC1-206ENST00000489540 OR10G4Q8NGN3 311 aa12.5□□□□□ -0.41
MDC1-206ENST00000489540 OR10G9Q8NGN4 311 aa12.5□□□□□ -0.41
MDC1-206ENST00000489540 OR10G7Q8NGN6 311 aa12.5□□□□□ -0.41
MDC1-206ENST00000489540 PHLDA1Q8WV24 401 aaPredicted RBP12.5□□□□□ -0.41
MDC1-206ENST00000489540 M0R3E3 92 aa12.49□□□□□ -0.41
MDC1-206ENST00000489540 TAAR5O14804 337 aa12.49□□□□□ -0.41
MDC1-206ENST00000489540 PRB4P10163 310 aaPredicted RBP12.49□□□□□ -0.41
MDC1-206ENST00000489540 GNPNAT1Q96EK6 184 aaPredicted RBP12.49□□□□□ -0.41
MDC1-206ENST00000489540 ZNF503Q96F45 646 aa12.49□□□□□ -0.41
MDC1-206ENST00000489540 STARD9Q9P2P6 4700 aa12.49□□□□□ -0.41
MDC1-206ENST00000489540 TRAV12-2A0A075B6T6 113 aa12.48□□□□□ -0.41
MDC1-206ENST00000489540 NPIPB6E9PJ23 425 aa12.48□□□□□ -0.41
MDC1-206ENST00000489540 RAB2AP61019 212 aa12.48□□□□□ -0.41
MDC1-206ENST00000489540 UBE2L3P68036 154 aaKnown RBP12.48□□□□□ -0.41
MDC1-206ENST00000489540 ICAM4Q14773 271 aa12.48□□□□□ -0.41
MDC1-206ENST00000489540 RRN3P1Q2M238 152 aa12.48□□□□□ -0.41
MDC1-206ENST00000489540 RPL7L1Q6DKI1 246 aaKnown RBP12.48□□□□□ -0.41
MDC1-206ENST00000489540 PQLC2Q6ZP29 291 aa12.48□□□□□ -0.41
MDC1-206ENST00000489540 AKAP14Q86UN6 197 aa12.48□□□□□ -0.41
MDC1-206ENST00000489540 BAP18Q8IXM2 172 aa12.48□□□□□ -0.41
MDC1-206ENST00000489540 RPP25LQ8N5L8 163 aaKnown RBP12.48□□□□□ -0.41
MDC1-206ENST00000489540 LINC00477Q96M19 166 aa12.48□□□□□ -0.41
MDC1-206ENST00000489540 ODF3Q96PU9 254 aa12.48□□□□□ -0.41
MDC1-206ENST00000489540 ARPC5O15511 151 aa12.47□□□□□ -0.41
MDC1-206ENST00000489540 JTBO76095 146 aa12.47□□□□□ -0.41
MDC1-206ENST00000489540 FAM122CQ6P4D5 195 aa12.47□□□□□ -0.41
MDC1-206ENST00000489540 TMEM256Q8N2U0 113 aa12.47□□□□□ -0.41
MDC1-206ENST00000489540 C11orf94C9JXX5 98 aa12.46□□□□□ -0.41
MDC1-206ENST00000489540 SPART-AS1P0CW21 52 aa12.46□□□□□ -0.41
MDC1-206ENST00000489540 CT45A10P0DMU9 189 aa12.46□□□□□ -0.41
MDC1-206ENST00000489540 LEPP41159 167 aa12.46□□□□□ -0.41
MDC1-206ENST00000489540 RANP62826 216 aaKnown RBP12.46□□□□□ -0.41
MDC1-206ENST00000489540 PHYHIPLQ96FC7 376 aa12.46□□□□□ -0.41
MDC1-206ENST00000489540 LINC01587Q99440 93 aa12.46□□□□□ -0.41
MDC1-206ENST00000489540 C20orf144Q9BQM9 153 aa12.46□□□□□ -0.41
MDC1-206ENST00000489540 LCE6AA0A183 80 aa12.45□□□□□ -0.42
MDC1-206ENST00000489540 TEX48A0A1B0GUV7 120 aa12.45□□□□□ -0.42
MDC1-206ENST00000489540 LOC102723971A0A1B0GUV8 181 aa12.45□□□□□ -0.42
MDC1-206ENST00000489540 SMLR1H3BR10 107 aa12.45□□□□□ -0.42
MDC1-206ENST00000489540 CSN1S1P47710 185 aa12.45□□□□□ -0.42
MDC1-206ENST00000489540 CDC34P49427 236 aaPredicted RBP12.45□□□□□ -0.42
MDC1-206ENST00000489540 EMP1P54849 157 aa12.45□□□□□ -0.42
MDC1-206ENST00000489540 CSMD3Q7Z407 3707 aa12.45□□□□□ -0.42
MDC1-206ENST00000489540 TAS2R60P59551 318 aa12.45□□□□□ -0.42
MDC1-206ENST00000489540 ERCC8Q13216 396 aa12.45□□□□□ -0.42
MDC1-206ENST00000489540 C9orf47Q6ZRZ4 202 aa12.45□□□□□ -0.42
MDC1-206ENST00000489540 RXFP4Q8TDU9 374 aa12.45□□□□□ -0.42
MDC1-206ENST00000489540 AGPAT4-IT1Q9H0P7 198 aa12.45□□□□□ -0.42
MDC1-206ENST00000489540 SH3BGRL3Q9H299 93 aa12.45□□□□□ -0.42
MDC1-206ENST00000489540 Q9H3A6 140 aa12.45□□□□□ -0.42
MDC1-206ENST00000489540 HMSDA8MTL9 139 aa12.44□□□□□ -0.42
MDC1-206ENST00000489540 ZNF705GA8MUZ8 300 aaPredicted RBP12.44□□□□□ -0.42
MDC1-206ENST00000489540 EIF3GO75821 320 aaKnown RBP eCLIP12.44□□□□□ -0.42
MDC1-206ENST00000489540 C12orf74Q32Q52 190 aa12.44□□□□□ -0.42
MDC1-206ENST00000489540 FAM74A1Q5RGS3 127 aa12.44□□□□□ -0.42
MDC1-206ENST00000489540 RAB24Q969Q5 203 aa12.44□□□□□ -0.42
MDC1-206ENST00000489540 ACTR3CQ9C0K3 210 aaPredicted RBP12.44□□□□□ -0.42
MDC1-206ENST00000489540 CELA1Q9UNI1 258 aa12.44□□□□□ -0.42
MDC1-206ENST00000489540 H7BYZ3 331 aa12.43□□□□□ -0.42
MDC1-206ENST00000489540 STAG3L2P0CL84 134 aa12.43□□□□□ -0.42
MDC1-206ENST00000489540 STAG3L3P0CL85 134 aa12.43□□□□□ -0.42
MDC1-206ENST00000489540 ZNF345Q14585 488 aa12.43□□□□□ -0.42
MDC1-206ENST00000489540 TMEM78Q5T7P6 136 aa12.43□□□□□ -0.42
MDC1-206ENST00000489540 C2CD4CQ8TF44 421 aa12.43□□□□□ -0.42
MDC1-206ENST00000489540 OTORQ9NRC9 128 aa12.43□□□□□ -0.42
MDC1-206ENST00000489540 DKK2Q9UBU2 259 aa12.43□□□□□ -0.42
MDC1-206ENST00000489540 TRAV10A0A0B4J240 114 aa12.42□□□□□ -0.42
MDC1-206ENST00000489540 RBAKDNA6NC62 111 aa12.42□□□□□ -0.42
MDC1-206ENST00000489540 HMGB3O15347 200 aaKnown RBP12.42□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 44.9 ms