RNA–Protein interactions for RNA: ENST00000489469.5

SMIM11A-206, Transcript of small integral membrane protein 11A, humanhuman

TSL 2

Gene SMIM11A, Length 780 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM11A-206ENST00000489469 FXYD5Q96DB9 178 aa11.41□□□□□ -0.58
SMIM11A-206ENST00000489469 MRPL53Q96EL3 112 aaKnown RBP11.41□□□□□ -0.58
SMIM11A-206ENST00000489469 CTXND1A0A1B0GTU2 59 aa11.4□□□□□ -0.58
SMIM11A-206ENST00000489469 H3BTX0 84 aa11.4□□□□□ -0.58
SMIM11A-206ENST00000489469 SNRPCP09234 159 aaKnown RBP11.4□□□□□ -0.58
SMIM11A-206ENST00000489469 OR10J4P0C629 311 aa11.4□□□□□ -0.58
SMIM11A-206ENST00000489469 IGFL4Q6B9Z1 124 aa11.4□□□□□ -0.58
SMIM11A-206ENST00000489469 SLC51BQ86UW2 128 aa11.4□□□□□ -0.58
SMIM11A-206ENST00000489469 LYPD1Q8N2G4 141 aa11.4□□□□□ -0.58
SMIM11A-206ENST00000489469 C9orf62Q8N4C0 152 aa11.4□□□□□ -0.58
SMIM11A-206ENST00000489469 BLNKQ8WV28 456 aa11.4□□□□□ -0.58
SMIM11A-206ENST00000489469 RPUSD4Q96CM3 377 aaKnown RBP11.4□□□□□ -0.58
SMIM11A-206ENST00000489469 ZNF503Q96F45 646 aa11.4□□□□□ -0.58
SMIM11A-206ENST00000489469 NDUFB4O95168 129 aa11.39□□□□□ -0.59
SMIM11A-206ENST00000489469 CXorf1O96002 111 aa11.39□□□□□ -0.59
SMIM11A-206ENST00000489469 C1QTNF4Q9BXJ3 329 aa11.39□□□□□ -0.59
SMIM11A-206ENST00000489469 TP53TG1Q9Y2A0 90 aa11.39□□□□□ -0.59
SMIM11A-206ENST00000489469 CA1P00915 261 aaPredicted RBP11.38□□□□□ -0.59
SMIM11A-206ENST00000489469 ARL14EPLP0DKL9 152 aa11.38□□□□□ -0.59
SMIM11A-206ENST00000489469 HLA-DMBP28068 263 aa11.38□□□□□ -0.59
SMIM11A-206ENST00000489469 GDF5OSQ5U4N7 250 aa11.38□□□□□ -0.59
SMIM11A-206ENST00000489469 DPPA3Q6W0C5 159 aa11.38□□□□□ -0.59
SMIM11A-206ENST00000489469 OR4B1Q8NGF8 309 aa11.38□□□□□ -0.59
SMIM11A-206ENST00000489469 OR8A1Q8NGG7 326 aa11.38□□□□□ -0.59
SMIM11A-206ENST00000489469 TMEM167BQ9NRX6 74 aa11.38□□□□□ -0.59
SMIM11A-206ENST00000489469 A8MTW9 85 aa11.37□□□□□ -0.59
SMIM11A-206ENST00000489469 F6UB75 175 aa11.37□□□□□ -0.59
SMIM11A-206ENST00000489469 HMGB3O15347 200 aaKnown RBP11.37□□□□□ -0.59
SMIM11A-206ENST00000489469 FAM74A1Q5RGS3 127 aa11.37□□□□□ -0.59
SMIM11A-206ENST00000489469 OR10J6PQ8NGY7 276 aa11.37□□□□□ -0.59
SMIM11A-206ENST00000489469 PHYHIPLQ96FC7 376 aa11.37□□□□□ -0.59
SMIM11A-206ENST00000489469 NBEAL2Q6ZNJ1 2754 aa11.37□□□□□ -0.59
SMIM11A-206ENST00000489469 COL7A1Q02388 2944 aa11.36□□□□□ -0.59
SMIM11A-206ENST00000489469 GCHFRP30047 84 aa11.36□□□□□ -0.59
SMIM11A-206ENST00000489469 CSN1S1P47710 185 aa11.36□□□□□ -0.59
SMIM11A-206ENST00000489469 RAB5CP51148 216 aa11.36□□□□□ -0.59
SMIM11A-206ENST00000489469 CNN1P51911 297 aaKnown RBP11.36□□□□□ -0.59
SMIM11A-206ENST00000489469 DEFB1P60022 68 aa11.36□□□□□ -0.59
SMIM11A-206ENST00000489469 HIST1H1AQ02539 215 aaPredicted RBP11.36□□□□□ -0.59
SMIM11A-206ENST00000489469 ICAM4Q14773 271 aa11.36□□□□□ -0.59
SMIM11A-206ENST00000489469 SUN5Q8TC36 379 aa11.36□□□□□ -0.59
SMIM11A-206ENST00000489469 TMED6Q8WW62 240 aa11.36□□□□□ -0.59
SMIM11A-206ENST00000489469 RCHY1Q96PM5 261 aa11.36□□□□□ -0.59
SMIM11A-206ENST00000489469 Q9H3A6 140 aa11.36□□□□□ -0.59
SMIM11A-206ENST00000489469 U3KQK5 164 aa11.36□□□□□ -0.59
SMIM11A-206ENST00000489469 ZNF705FA8MVS1 300 aaPredicted RBP11.35□□□□□ -0.59
SMIM11A-206ENST00000489469 SPRY2O43597 315 aa11.35□□□□□ -0.59
SMIM11A-206ENST00000489469 EIF3GO75821 320 aaKnown RBP eCLIP11.35□□□□□ -0.59
SMIM11A-206ENST00000489469 AMBPP02760 352 aa11.35□□□□□ -0.59
SMIM11A-206ENST00000489469 RANP62826 216 aaKnown RBP11.35□□□□□ -0.59
SMIM11A-206ENST00000489469 ZNF726P1Q15940 193 aa11.35□□□□□ -0.59
SMIM11A-206ENST00000489469 DEFB135Q30KP9 77 aa11.35□□□□□ -0.59
SMIM11A-206ENST00000489469 EXOC3-AS1Q8N2X6 119 aa11.35□□□□□ -0.59
SMIM11A-206ENST00000489469 RXFP4Q8TDU9 374 aa11.35□□□□□ -0.59
SMIM11A-206ENST00000489469 RNF183Q96D59 192 aa11.35□□□□□ -0.59
SMIM11A-206ENST00000489469 OTORQ9NRC9 128 aa11.35□□□□□ -0.59
SMIM11A-206ENST00000489469 PPP1R14DQ9NXH3 145 aa11.35□□□□□ -0.59
SMIM11A-206ENST00000489469 TENM3Q9P273 2699 aa11.34□□□□□ -0.59
SMIM11A-206ENST00000489469 STAB2Q8WWQ8 2551 aa11.34□□□□□ -0.59
SMIM11A-206ENST00000489469 MAP1LC3B2A6NCE7 125 aa11.34□□□□□ -0.59
SMIM11A-206ENST00000489469 M0R3E3 92 aa11.34□□□□□ -0.59
SMIM11A-206ENST00000489469 IGKV3-20P01619 116 aa11.34□□□□□ -0.59
SMIM11A-206ENST00000489469 SSX7Q7RTT5 188 aa11.34□□□□□ -0.59
SMIM11A-206ENST00000489469 ARL6IP6Q8N6S5 226 aa11.34□□□□□ -0.59
SMIM11A-206ENST00000489469 MAP1LC3BQ9GZQ8 125 aa11.34□□□□□ -0.59
SMIM11A-206ENST00000489469 DNAH9Q9NYC9 4486 aa11.34□□□□□ -0.59
SMIM11A-206ENST00000489469 IQCF2Q8IXL9 164 aa11.33□□□□□ -0.6
SMIM11A-206ENST00000489469 CMTM2Q8TAZ6 248 aa11.33□□□□□ -0.6
SMIM11A-206ENST00000489469 FAM213BQ8TBF2 198 aa11.33□□□□□ -0.6
SMIM11A-206ENST00000489469 OVOL2Q9BRP0 275 aa11.33□□□□□ -0.6
SMIM11A-206ENST00000489469 A0A1W2PRE2 83 aa11.32□□□□□ -0.6
SMIM11A-206ENST00000489469 RBAKDNA6NC62 111 aa11.32□□□□□ -0.6
SMIM11A-206ENST00000489469 PGPA6NDG6 321 aa11.32□□□□□ -0.6
SMIM11A-206ENST00000489469 PRAC2D3DTV9 90 aa11.32□□□□□ -0.6
SMIM11A-206ENST00000489469 NPIPB6E9PJ23 425 aa11.32□□□□□ -0.6
SMIM11A-206ENST00000489469 GIG44P09565 113 aaPredicted RBP11.32□□□□□ -0.6
SMIM11A-206ENST00000489469 ZNF705DP0CH99 300 aaPredicted RBP11.32□□□□□ -0.6
SMIM11A-206ENST00000489469 ZNF705BP0CI00 300 aaPredicted RBP11.32□□□□□ -0.6
SMIM11A-206ENST00000489469 TSPOP30536 169 aa11.32□□□□□ -0.6
SMIM11A-206ENST00000489469 AMTNQ6UX39 209 aa11.32□□□□□ -0.6
SMIM11A-206ENST00000489469 MBD3L1Q8WWY6 194 aa11.32□□□□□ -0.6
SMIM11A-206ENST00000489469 ODF3Q96PU9 254 aa11.32□□□□□ -0.6
SMIM11A-206ENST00000489469 RETNQ9HD89 108 aa11.32□□□□□ -0.6
SMIM11A-206ENST00000489469 BOLA2-SMG1P6H3BVE0 249 aa11.31□□□□□ -0.6
SMIM11A-206ENST00000489469 SLC25A5P05141 298 aaKnown RBP11.31□□□□□ -0.6
SMIM11A-206ENST00000489469 H2AFB1P0C5Y9 115 aa11.31□□□□□ -0.6
SMIM11A-206ENST00000489469 FHITP49789 147 aa11.31□□□□□ -0.6
SMIM11A-206ENST00000489469 SULT1A2P50226 295 aa11.31□□□□□ -0.6
SMIM11A-206ENST00000489469 NKX2-5P52952 324 aaPredicted RBP11.31□□□□□ -0.6
SMIM11A-206ENST00000489469 LINC00477Q96M19 166 aa11.31□□□□□ -0.6
SMIM11A-206ENST00000489469 NKX6-2Q9C056 277 aaPredicted RBP11.31□□□□□ -0.6
SMIM11A-206ENST00000489469 SLC35B3Q9H1N7 401 aa11.31□□□□□ -0.6
SMIM11A-206ENST00000489469 XCL2Q9UBD3 114 aa11.31□□□□□ -0.6
SMIM11A-206ENST00000489469 SERTM2A0A1B0GWG4 89 aa11.3□□□□□ -0.6
SMIM11A-206ENST00000489469 TEX46H3BTG2 121 aa11.3□□□□□ -0.6
SMIM11A-206ENST00000489469 FGF8P55075 233 aaPredicted RBP11.3□□□□□ -0.6
SMIM11A-206ENST00000489469 TMEM78Q5T7P6 136 aa11.3□□□□□ -0.6
SMIM11A-206ENST00000489469 C9orf47Q6ZRZ4 202 aa11.3□□□□□ -0.6
SMIM11A-206ENST00000489469 C5orf17Q8NAS9 161 aa11.3□□□□□ -0.6
SMIM11A-206ENST00000489469 CSNK1G2-AS1Q8NCQ2 148 aa11.3□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 43.1 ms