RNA–Protein interactions for RNA: ENST00000489300.1

CDK11A-218, Transcript of cyclin dependent kinase 11A, humanhuman

TSL 3

Gene CDK11A, Length 577 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK11A-218ENST00000489300 AKR1C8PQ5T2L2 129 aa12.85□□□□□ -0.35
CDK11A-218ENST00000489300 RNF182Q8N6D2 247 aa12.85□□□□□ -0.35
CDK11A-218ENST00000489300 BLNKQ8WV28 456 aa12.85□□□□□ -0.35
CDK11A-218ENST00000489300 MRPL53Q96EL3 112 aaKnown RBP12.85□□□□□ -0.35
CDK11A-218ENST00000489300 C20orf173Q96LM9 149 aa12.85□□□□□ -0.35
CDK11A-218ENST00000489300 C17orf77Q96MU5 243 aa12.85□□□□□ -0.35
CDK11A-218ENST00000489300 ACTR3CQ9C0K3 210 aaPredicted RBP12.85□□□□□ -0.35
CDK11A-218ENST00000489300 ZNF586Q9NXT0 402 aa12.85□□□□□ -0.35
CDK11A-218ENST00000489300 A0A0J9YX75 114 aa12.84□□□□□ -0.35
CDK11A-218ENST00000489300 PYYP10082 97 aa12.84□□□□□ -0.35
CDK11A-218ENST00000489300 CDC34P49427 236 aaPredicted RBP12.84□□□□□ -0.35
CDK11A-218ENST00000489300 IGFL4Q6B9Z1 124 aa12.84□□□□□ -0.35
CDK11A-218ENST00000489300 FAM122CQ6P4D5 195 aa12.84□□□□□ -0.35
CDK11A-218ENST00000489300 OR10J6PQ8NGY7 276 aa12.84□□□□□ -0.35
CDK11A-218ENST00000489300 RPUSD4Q96CM3 377 aaKnown RBP12.84□□□□□ -0.35
CDK11A-218ENST00000489300 RNF183Q96D59 192 aa12.84□□□□□ -0.35
CDK11A-218ENST00000489300 FAM167A-AS1Q96KT0 104 aa12.84□□□□□ -0.35
CDK11A-218ENST00000489300 SH3BGRL3Q9H299 93 aa12.84□□□□□ -0.35
CDK11A-218ENST00000489300 SNRPCP09234 159 aaKnown RBP12.83□□□□□ -0.36
CDK11A-218ENST00000489300 RAB2AP61019 212 aa12.83□□□□□ -0.36
CDK11A-218ENST00000489300 UBE2L3P68036 154 aaKnown RBP12.83□□□□□ -0.36
CDK11A-218ENST00000489300 DEFB135Q30KP9 77 aa12.83□□□□□ -0.36
CDK11A-218ENST00000489300 LYPD1Q8N2G4 141 aa12.83□□□□□ -0.36
CDK11A-218ENST00000489300 RAB19A4D1S5 217 aa12.82□□□□□ -0.36
CDK11A-218ENST00000489300 H3BTX0 84 aa12.82□□□□□ -0.36
CDK11A-218ENST00000489300 AMBPP02760 352 aa12.82□□□□□ -0.36
CDK11A-218ENST00000489300 CSN1S1P47710 185 aa12.82□□□□□ -0.36
CDK11A-218ENST00000489300 DPPA3Q6W0C5 159 aa12.82□□□□□ -0.36
CDK11A-218ENST00000489300 OR8A1Q8NGG7 326 aa12.82□□□□□ -0.36
CDK11A-218ENST00000489300 WWC2-AS2Q96NR7 200 aa12.82□□□□□ -0.36
CDK11A-218ENST00000489300 OVOL2Q9BRP0 275 aa12.82□□□□□ -0.36
CDK11A-218ENST00000489300 HUWE1Q7Z6Z7 4374 aaKnown RBP12.82□□□□□ -0.36
CDK11A-218ENST00000489300 TEX46H3BTG2 121 aa12.81□□□□□ -0.36
CDK11A-218ENST00000489300 IGKV3-20P01619 116 aa12.81□□□□□ -0.36
CDK11A-218ENST00000489300 OR10J4P0C629 311 aa12.81□□□□□ -0.36
CDK11A-218ENST00000489300 CNN1P51911 297 aaKnown RBP12.81□□□□□ -0.36
CDK11A-218ENST00000489300 HIST1H1AQ02539 215 aaPredicted RBP12.81□□□□□ -0.36
CDK11A-218ENST00000489300 UQCC3Q6UW78 93 aa12.81□□□□□ -0.36
CDK11A-218ENST00000489300 EIF4E3Q8N5X7 224 aaKnown RBP12.81□□□□□ -0.36
CDK11A-218ENST00000489300 FAM213BQ8TBF2 198 aa12.81□□□□□ -0.36
CDK11A-218ENST00000489300 FXYD5Q96DB9 178 aa12.81□□□□□ -0.36
CDK11A-218ENST00000489300 RARRES2Q99969 163 aa12.81□□□□□ -0.36
CDK11A-218ENST00000489300 F6UB75 175 aa12.8□□□□□ -0.36
CDK11A-218ENST00000489300 SLC17A3O00476 420 aa12.8□□□□□ -0.36
CDK11A-218ENST00000489300 CXorf1O96002 111 aa12.8□□□□□ -0.36
CDK11A-218ENST00000489300 GDF5OSQ5U4N7 250 aa12.8□□□□□ -0.36
CDK11A-218ENST00000489300 RAB24Q969Q5 203 aa12.8□□□□□ -0.36
CDK11A-218ENST00000489300 RETNQ9HD89 108 aa12.8□□□□□ -0.36
CDK11A-218ENST00000489300 TMEM167BQ9NRX6 74 aa12.8□□□□□ -0.36
CDK11A-218ENST00000489300 PLA2G2EQ9NZK7 142 aa12.8□□□□□ -0.36
CDK11A-218ENST00000489300 RFNGQ9Y644 331 aa12.8□□□□□ -0.36
CDK11A-218ENST00000489300 STAG3L2P0CL84 134 aa12.79□□□□□ -0.36
CDK11A-218ENST00000489300 STAG3L3P0CL85 134 aa12.79□□□□□ -0.36
CDK11A-218ENST00000489300 RPP25LQ8N5L8 163 aaKnown RBP12.79□□□□□ -0.36
CDK11A-218ENST00000489300 OR11H2Q8NH07 326 aa12.79□□□□□ -0.36
CDK11A-218ENST00000489300 IL17DQ8TAD2 202 aa12.79□□□□□ -0.36
CDK11A-218ENST00000489300 RXFP4Q8TDU9 374 aa12.79□□□□□ -0.36
CDK11A-218ENST00000489300 CTXND1A0A1B0GTU2 59 aa12.78□□□□□ -0.36
CDK11A-218ENST00000489300 KRBOX1C9JBD0 128 aa12.78□□□□□ -0.36
CDK11A-218ENST00000489300 HLA-DMBP28068 263 aa12.78□□□□□ -0.36
CDK11A-218ENST00000489300 TSPOP30536 169 aa12.78□□□□□ -0.36
CDK11A-218ENST00000489300 RANP62826 216 aaKnown RBP12.78□□□□□ -0.36
CDK11A-218ENST00000489300 ICAM4Q14773 271 aa12.78□□□□□ -0.36
CDK11A-218ENST00000489300 CMTM2Q8TAZ6 248 aa12.78□□□□□ -0.36
CDK11A-218ENST00000489300 XCL2Q9UBD3 114 aa12.78□□□□□ -0.36
CDK11A-218ENST00000489300 GOLT1BQ9Y3E0 138 aa12.78□□□□□ -0.36
CDK11A-218ENST00000489300 ZNF705FA8MVS1 300 aaPredicted RBP12.77□□□□□ -0.37
CDK11A-218ENST00000489300 NDUFB4O95168 129 aa12.77□□□□□ -0.37
CDK11A-218ENST00000489300 HBE1P02100 147 aa12.77□□□□□ -0.37
CDK11A-218ENST00000489300 H2AFB1P0C5Y9 115 aa12.77□□□□□ -0.37
CDK11A-218ENST00000489300 DEFB1P60022 68 aa12.77□□□□□ -0.37
CDK11A-218ENST00000489300 TOR2AQ5JU69 321 aa12.77□□□□□ -0.37
CDK11A-218ENST00000489300 OTORQ9NRC9 128 aa12.77□□□□□ -0.37
CDK11A-218ENST00000489300 A8MTW9 85 aa12.76□□□□□ -0.37
CDK11A-218ENST00000489300 ARL14EPLP0DKL9 152 aa12.76□□□□□ -0.37
CDK11A-218ENST00000489300 EXOC3-AS1Q8N2X6 119 aa12.76□□□□□ -0.37
CDK11A-218ENST00000489300 LINC00477Q96M19 166 aa12.76□□□□□ -0.37
CDK11A-218ENST00000489300 Q9H3A6 140 aa12.76□□□□□ -0.37
CDK11A-218ENST00000489300 TREM1Q9NP99 234 aa12.76□□□□□ -0.37
CDK11A-218ENST00000489300 HMGB3O15347 200 aaKnown RBP12.75□□□□□ -0.37
CDK11A-218ENST00000489300 GIG44P09565 113 aaPredicted RBP12.75□□□□□ -0.37
CDK11A-218ENST00000489300 ZNF705DP0CH99 300 aaPredicted RBP12.75□□□□□ -0.37
CDK11A-218ENST00000489300 ZNF705BP0CI00 300 aaPredicted RBP12.75□□□□□ -0.37
CDK11A-218ENST00000489300 MIFP14174 115 aa12.75□□□□□ -0.37
CDK11A-218ENST00000489300 GCHFRP30047 84 aa12.75□□□□□ -0.37
CDK11A-218ENST00000489300 IQCF2Q8IXL9 164 aa12.75□□□□□ -0.37
CDK11A-218ENST00000489300 ARL6IP6Q8N6S5 226 aa12.75□□□□□ -0.37
CDK11A-218ENST00000489300 ZNF503Q96F45 646 aa12.75□□□□□ -0.37
CDK11A-218ENST00000489300 TMEM208Q9BTX3 173 aa12.75□□□□□ -0.37
CDK11A-218ENST00000489300 TGP01266 2768 aa12.75□□□□□ -0.37
CDK11A-218ENST00000489300 PGPA6NDG6 321 aa12.74□□□□□ -0.37
CDK11A-218ENST00000489300 SMIM9A6NGZ8 99 aa12.74□□□□□ -0.37
CDK11A-218ENST00000489300 INSP01308 110 aa12.74□□□□□ -0.37
CDK11A-218ENST00000489300 LEPP41159 167 aa12.74□□□□□ -0.37
CDK11A-218ENST00000489300 CDKN1BP46527 198 aa12.74□□□□□ -0.37
CDK11A-218ENST00000489300 FHITP49789 147 aa12.74□□□□□ -0.37
CDK11A-218ENST00000489300 FXYD7P58549 80 aa12.74□□□□□ -0.37
CDK11A-218ENST00000489300 TMEM78Q5T7P6 136 aa12.74□□□□□ -0.37
CDK11A-218ENST00000489300 LYPD6BQ8NI32 183 aa12.74□□□□□ -0.37
CDK11A-218ENST00000489300 IGF2BP2-AS1Q96M15 143 aa12.74□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 49.5 ms