RNA–Protein interactions for RNA: ENST00000489212.2

LIME1-207, Transcript of Lck interacting transmembrane adaptor 1, humanhuman

TSL 5

Gene LIME1, Length 559 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIME1-207ENST00000489212 ZNF705GA8MUZ8 300 aaPredicted RBP15.11■□□□□ 0.01
LIME1-207ENST00000489212 PET100P0DJ07 73 aa15.11■□□□□ 0.01
LIME1-207ENST00000489212 PYYP10082 97 aa15.11■□□□□ 0.01
LIME1-207ENST00000489212 FAM222AQ5U5X8 452 aa15.11■□□□□ 0.01
LIME1-207ENST00000489212 ATP5SQ99766 215 aa15.11■□□□□ 0.01
LIME1-207ENST00000489212 SLC25A2Q9BXI2 301 aa15.11■□□□□ 0.01
LIME1-207ENST00000489212 PLA2G2EQ9NZK7 142 aa15.11■□□□□ 0.01
LIME1-207ENST00000489212 TRBV19A0A075B6N1 114 aa15.1■□□□□ 0.01
LIME1-207ENST00000489212 DEFB131BA0A096LNP1 70 aa15.1■□□□□ 0.01
LIME1-207ENST00000489212 NDUFB4O95168 129 aa15.1■□□□□ 0.01
LIME1-207ENST00000489212 RPL12P30050 165 aaKnown RBP15.1■□□□□ 0.01
LIME1-207ENST00000489212 MIR17HGQ75NE6 70 aa15.1■□□□□ 0.01
LIME1-207ENST00000489212 FAM167A-AS1Q96KT0 104 aa15.1■□□□□ 0.01
LIME1-207ENST00000489212 PARD6GQ9BYG4 376 aaPredicted RBP15.1■□□□□ 0.01
LIME1-207ENST00000489212 SMIM3Q9BZL3 60 aa15.1■□□□□ 0.01
LIME1-207ENST00000489212 PPP1R14DQ9NXH3 145 aa15.1■□□□□ 0.01
LIME1-207ENST00000489212 YTHDF2Q9Y5A9 579 aaKnown RBP15.1■□□□□ 0.01
LIME1-207ENST00000489212 ZNF253O75346 499 aa15.09■□□□□ 0.01
LIME1-207ENST00000489212 HIST1H1EP10412 219 aaKnown RBP15.09■□□□□ 0.01
LIME1-207ENST00000489212 TCTAP57738 103 aa15.09■□□□□ 0.01
LIME1-207ENST00000489212 KIR3DS1Q14943 382 aa15.09■□□□□ 0.01
LIME1-207ENST00000489212 DNAH10Q8IVF4 4471 aa15.08■□□□□ 0.01
LIME1-207ENST00000489212 IGHV4-4A0A075B6R2 117 aa15.08■□□□□ 0
LIME1-207ENST00000489212 RPP25LQ8N5L8 163 aaKnown RBP15.08■□□□□ 0
LIME1-207ENST00000489212 OR10J6PQ8NGY7 276 aa15.08■□□□□ 0
LIME1-207ENST00000489212 WFDC1Q9HC57 220 aa15.08■□□□□ 0
LIME1-207ENST00000489212 M0R3E3 92 aa15.07■□□□□ 0
LIME1-207ENST00000489212 AZU1P20160 251 aa15.07■□□□□ 0
LIME1-207ENST00000489212 CDKN1BP46527 198 aa15.07■□□□□ 0
LIME1-207ENST00000489212 FCN2Q15485 313 aa15.07■□□□□ 0
LIME1-207ENST00000489212 KCNIP2Q9NS61 270 aa15.07■□□□□ 0
LIME1-207ENST00000489212 BLNKQ8WV28 456 aa15.06■□□□□ 0
LIME1-207ENST00000489212 LINC01587Q99440 93 aa15.06■□□□□ 0
LIME1-207ENST00000489212 NIPSNAP3BQ9BS92 247 aa15.06■□□□□ 0
LIME1-207ENST00000489212 FRAS1Q86XX4 4008 aa15.06■□□□□ 0
LIME1-207ENST00000489212 TEX48A0A1B0GUV7 120 aa15.05■□□□□ -0
LIME1-207ENST00000489212 PLAC8L1A1L4L8 177 aa15.05■□□□□ -0
LIME1-207ENST00000489212 NPIPB6E9PJ23 425 aa15.05■□□□□ -0
LIME1-207ENST00000489212 C17orf112F2Z3M2 114 aa15.05■□□□□ -0
LIME1-207ENST00000489212 CT45A10P0DMU9 189 aa15.05■□□□□ -0
LIME1-207ENST00000489212 PDE6HQ13956 83 aa15.05■□□□□ -0
LIME1-207ENST00000489212 EXOC3-AS1Q8N2X6 119 aa15.05■□□□□ -0
LIME1-207ENST00000489212 MRPL53Q96EL3 112 aaKnown RBP15.05■□□□□ -0
LIME1-207ENST00000489212 MRPL32Q9BYC8 188 aaKnown RBP15.05■□□□□ -0
LIME1-207ENST00000489212 FUT9Q9Y231 359 aa15.05■□□□□ -0
LIME1-207ENST00000489212 TIMM9Q9Y5J7 89 aa15.05■□□□□ -0
LIME1-207ENST00000489212 TSPOP30536 169 aa15.04■□□□□ -0
LIME1-207ENST00000489212 TMEM256Q8N2U0 113 aa15.04■□□□□ -0
LIME1-207ENST00000489212 FXYD5Q96DB9 178 aa15.04■□□□□ -0
LIME1-207ENST00000489212 MED28Q9H204 178 aa15.04■□□□□ -0
LIME1-207ENST00000489212 OR51M1Q9H341 326 aa15.04■□□□□ -0
LIME1-207ENST00000489212 IFNA5P01569 189 aa15.03■□□□□ -0
LIME1-207ENST00000489212 TAS2R60P59551 318 aa15.03■□□□□ -0
LIME1-207ENST00000489212 OXA1LQ15070 435 aa15.03■□□□□ -0
LIME1-207ENST00000489212 FFAR4Q5NUL3 377 aa15.03■□□□□ -0
LIME1-207ENST00000489212 GFI1BQ5VTD9 330 aa15.03■□□□□ -0
LIME1-207ENST00000489212 SCGB1C1Q8TD33 95 aa15.03■□□□□ -0
LIME1-207ENST00000489212 ZNF503Q96F45 646 aa15.03■□□□□ -0
LIME1-207ENST00000489212 PAXXQ9BUH6 204 aa15.03■□□□□ -0
LIME1-207ENST00000489212 OR10J4P0C629 311 aa15.02■□□□□ -0
LIME1-207ENST00000489212 NBEAP1P0C6P0 100 aa15.02■□□□□ -0
LIME1-207ENST00000489212 ERCC8Q13216 396 aa15.02■□□□□ -0
LIME1-207ENST00000489212 PRELID1Q9Y255 219 aa15.02■□□□□ -0
LIME1-207ENST00000489212 BIRC6Q9NR09 4857 aa15.02□□□□□ -0.01
LIME1-207ENST00000489212 J3KRW8 73 aa15.01□□□□□ -0.01
LIME1-207ENST00000489212 HTN1P15515 57 aa15.01□□□□□ -0.01
LIME1-207ENST00000489212 DAD1P61803 113 aa15.01□□□□□ -0.01
LIME1-207ENST00000489212 ICAM4Q14773 271 aa15.01□□□□□ -0.01
LIME1-207ENST00000489212 Q5BKY6 102 aa15.01□□□□□ -0.01
LIME1-207ENST00000489212 ODF3Q96PU9 254 aa15.01□□□□□ -0.01
LIME1-207ENST00000489212 EIF3GO75821 320 aaKnown RBP eCLIP15□□□□□ -0.01
LIME1-207ENST00000489212 HTN3P15516 51 aa15□□□□□ -0.01
LIME1-207ENST00000489212 RNF141Q8WVD5 230 aa15□□□□□ -0.01
LIME1-207ENST00000489212 PHYHIPLQ96FC7 376 aa15□□□□□ -0.01
LIME1-207ENST00000489212 C20orf144Q9BQM9 153 aa15□□□□□ -0.01
LIME1-207ENST00000489212 NDUFAF3Q9BU61 184 aa15□□□□□ -0.01
LIME1-207ENST00000489212 LYRM9A8MSI8 78 aa14.99□□□□□ -0.01
LIME1-207ENST00000489212 H7BYZ3 331 aa14.99□□□□□ -0.01
LIME1-207ENST00000489212 LEPP41159 167 aa14.99□□□□□ -0.01
LIME1-207ENST00000489212 FAM122CQ6P4D5 195 aa14.99□□□□□ -0.01
LIME1-207ENST00000489212 AGPAT4-IT1Q9H0P7 198 aa14.99□□□□□ -0.01
LIME1-207ENST00000489212 AAMDCQ9H7C9 122 aa14.99□□□□□ -0.01
LIME1-207ENST00000489212 IGKV2-40A0A087WW87 121 aaPredicted RBP14.98□□□□□ -0.01
LIME1-207ENST00000489212 OR7C2O60412 319 aa14.98□□□□□ -0.01
LIME1-207ENST00000489212 IGKV2D-40P01614 121 aaPredicted RBP14.98□□□□□ -0.01
LIME1-207ENST00000489212 RNASE8Q8TDE3 154 aaKnown RBP14.98□□□□□ -0.01
LIME1-207ENST00000489212 C16orf74Q96GX8 76 aa14.98□□□□□ -0.01
LIME1-207ENST00000489212 FAM19A4Q96LR4 140 aa14.98□□□□□ -0.01
LIME1-207ENST00000489212 LINC00477Q96M19 166 aa14.97□□□□□ -0.01
LIME1-207ENST00000489212 AQP10Q96PS8 301 aa14.97□□□□□ -0.01
LIME1-207ENST00000489212 TRAV12-3A0A0B4J271 114 aa14.96□□□□□ -0.01
LIME1-207ENST00000489212 GIPP09681 153 aaPredicted RBP14.96□□□□□ -0.01
LIME1-207ENST00000489212 DEFB130BP0DP73 79 aa14.96□□□□□ -0.01
LIME1-207ENST00000489212 DEFB130AP0DP74 79 aa14.96□□□□□ -0.01
LIME1-207ENST00000489212 ZNF493Q6ZR52 646 aa14.96□□□□□ -0.01
LIME1-207ENST00000489212 C9orf47Q6ZRZ4 202 aa14.96□□□□□ -0.01
LIME1-207ENST00000489212 TMEM263Q8WUH6 116 aaKnown RBP14.96□□□□□ -0.01
LIME1-207ENST00000489212 VGLL1Q99990 258 aa14.96□□□□□ -0.01
LIME1-207ENST00000489212 KLLNB2CW77 178 aa14.95□□□□□ -0.02
LIME1-207ENST00000489212 RAB2AP61019 212 aa14.95□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms