RNA–Protein interactions for RNA: ENST00000489045.5

COL9A3-213, Transcript of collagen type IX alpha 3 chain, humanhuman

TSL 5

Gene COL9A3, Length 838 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A3-213ENST00000489045 DEFB130AP0DP74 79 aa16.26■□□□□ 0.19
COL9A3-213ENST00000489045 HTN1P15515 57 aa16.26■□□□□ 0.19
COL9A3-213ENST00000489045 GUK1Q16774 197 aa16.26■□□□□ 0.19
COL9A3-213ENST00000489045 CHAC2Q8WUX2 184 aa16.26■□□□□ 0.19
COL9A3-213ENST00000489045 NACAE9PAV3 2078 aa16.25■□□□□ 0.19
COL9A3-213ENST00000489045 A6NHS1 94 aa16.25■□□□□ 0.19
COL9A3-213ENST00000489045 IFITM3Q01628 133 aa16.25■□□□□ 0.19
COL9A3-213ENST00000489045 KIR3DS1Q14943 382 aa16.25■□□□□ 0.19
COL9A3-213ENST00000489045 FCN2Q15485 313 aa16.25■□□□□ 0.19
COL9A3-213ENST00000489045 ZNF586Q9NXT0 402 aa16.25■□□□□ 0.19
COL9A3-213ENST00000489045 DNAH2Q9P225 4427 aa16.24■□□□□ 0.19
COL9A3-213ENST00000489045 M0R2N4 97 aa16.24■□□□□ 0.19
COL9A3-213ENST00000489045 C16orf74Q96GX8 76 aa16.24■□□□□ 0.19
COL9A3-213ENST00000489045 NHLH2Q02577 135 aa16.23■□□□□ 0.19
COL9A3-213ENST00000489045 C20orf144Q9BQM9 153 aa16.23■□□□□ 0.19
COL9A3-213ENST00000489045 NPCDR1Q9BY65 106 aa16.23■□□□□ 0.19
COL9A3-213ENST00000489045 PTTG2Q9NZH5 202 aa16.23■□□□□ 0.19
COL9A3-213ENST00000489045 H7BYZ3 331 aa16.22■□□□□ 0.19
COL9A3-213ENST00000489045 PRAF2O60831 178 aa16.22■□□□□ 0.19
COL9A3-213ENST00000489045 ZNF253O75346 499 aa16.22■□□□□ 0.19
COL9A3-213ENST00000489045 MPDU1O75352 247 aa16.22■□□□□ 0.19
COL9A3-213ENST00000489045 LRRC37A5PQ49AS3 106 aa16.22■□□□□ 0.19
COL9A3-213ENST00000489045 GFI1BQ5VTD9 330 aa16.22■□□□□ 0.19
COL9A3-213ENST00000489045 NMES1Q9C002 83 aa16.22■□□□□ 0.19
COL9A3-213ENST00000489045 OR5AC2Q9NZP5 309 aa16.22■□□□□ 0.19
COL9A3-213ENST00000489045 TRBV19A0A075B6N1 114 aa16.21■□□□□ 0.19
COL9A3-213ENST00000489045 E5RGE8 158 aa16.21■□□□□ 0.19
COL9A3-213ENST00000489045 NPIPB6E9PJ23 425 aa16.21■□□□□ 0.19
COL9A3-213ENST00000489045 INMT-MINDY4F8WBC2 141 aa16.21■□□□□ 0.19
COL9A3-213ENST00000489045 RLN2P04090 185 aa16.21■□□□□ 0.19
COL9A3-213ENST00000489045 GCSAMLQ5JQS6 135 aa16.21■□□□□ 0.19
COL9A3-213ENST00000489045 ZNF493Q6ZR52 646 aa16.21■□□□□ 0.19
COL9A3-213ENST00000489045 LINC00336Q6ZUF6 198 aa16.21■□□□□ 0.19
COL9A3-213ENST00000489045 C15orf53Q8NAA6 179 aa16.21■□□□□ 0.19
COL9A3-213ENST00000489045 OR5C1Q8NGR4 320 aa16.21■□□□□ 0.19
COL9A3-213ENST00000489045 THAP6Q8TBB0 222 aa16.21■□□□□ 0.19
COL9A3-213ENST00000489045 RNASE8Q8TDE3 154 aaKnown RBP16.21■□□□□ 0.19
COL9A3-213ENST00000489045 TMEM263Q8WUH6 116 aaKnown RBP16.21■□□□□ 0.19
COL9A3-213ENST00000489045 SLC25A31Q9H0C2 315 aa16.21■□□□□ 0.19
COL9A3-213ENST00000489045 TMEM14CQ9P0S9 112 aa16.21■□□□□ 0.19
COL9A3-213ENST00000489045 TIMM8BQ9Y5J9 83 aaPredicted RBP16.21■□□□□ 0.19
COL9A3-213ENST00000489045 IGLV2-18A0A075B6J9 118 aa16.2■□□□□ 0.18
COL9A3-213ENST00000489045 CT45A10P0DMU9 189 aa16.2■□□□□ 0.18
COL9A3-213ENST00000489045 PYYP10082 97 aa16.2■□□□□ 0.18
COL9A3-213ENST00000489045 RNF212Q495C1 297 aa16.2■□□□□ 0.18
COL9A3-213ENST00000489045 DNAH17Q9UFH2 4485 aa16.2■□□□□ 0.18
COL9A3-213ENST00000489045 FAT2Q9NYQ8 4349 aa16.19■□□□□ 0.18
COL9A3-213ENST00000489045 F5H768 121 aa16.19■□□□□ 0.18
COL9A3-213ENST00000489045 H0YIZ8 118 aa16.19■□□□□ 0.18
COL9A3-213ENST00000489045 J3KRW8 73 aa16.19■□□□□ 0.18
COL9A3-213ENST00000489045 M0R3E3 92 aa16.19■□□□□ 0.18
COL9A3-213ENST00000489045 ATP5G1P05496 136 aa16.19■□□□□ 0.18
COL9A3-213ENST00000489045 LEPP41159 167 aa16.19■□□□□ 0.18
COL9A3-213ENST00000489045 ATP5G3P48201 142 aa16.19■□□□□ 0.18
COL9A3-213ENST00000489045 CLINT1Q14677 625 aa16.19■□□□□ 0.18
COL9A3-213ENST00000489045 LGALS9BQ3B8N2 356 aa16.19■□□□□ 0.18
COL9A3-213ENST00000489045 ODF3Q96PU9 254 aa16.19■□□□□ 0.18
COL9A3-213ENST00000489045 NOP10Q9NPE3 64 aaKnown RBP16.19■□□□□ 0.18
COL9A3-213ENST00000489045 CBY3A6NI87 242 aa16.18■□□□□ 0.18
COL9A3-213ENST00000489045 NDUFB4O95168 129 aa16.18■□□□□ 0.18
COL9A3-213ENST00000489045 HIST1H1EP10412 219 aaKnown RBP16.18■□□□□ 0.18
COL9A3-213ENST00000489045 MRPL53Q96EL3 112 aaKnown RBP16.18■□□□□ 0.18
COL9A3-213ENST00000489045 TIMM9Q9Y5J7 89 aa16.18■□□□□ 0.18
COL9A3-213ENST00000489045 RTL8CO15255 209 aa16.17■□□□□ 0.18
COL9A3-213ENST00000489045 CYCSP99999 105 aaKnown RBP16.17■□□□□ 0.18
COL9A3-213ENST00000489045 BLNKQ8WV28 456 aa16.17■□□□□ 0.18
COL9A3-213ENST00000489045 SLC25A2Q9BXI2 301 aa16.17■□□□□ 0.18
COL9A3-213ENST00000489045 TRAV12-3A0A0B4J271 114 aa16.16■□□□□ 0.18
COL9A3-213ENST00000489045 H2BFSP57053 126 aa16.16■□□□□ 0.18
COL9A3-213ENST00000489045 PDE6HQ13956 83 aa16.16■□□□□ 0.18
COL9A3-213ENST00000489045 CCDC28AQ8IWP9 274 aa16.16■□□□□ 0.18
COL9A3-213ENST00000489045 MARVELD1Q9BSK0 173 aa16.16■□□□□ 0.18
COL9A3-213ENST00000489045 ERCC8Q13216 396 aa16.15■□□□□ 0.18
COL9A3-213ENST00000489045 Q6ZR54 194 aa16.15■□□□□ 0.18
COL9A3-213ENST00000489045 MIR17HGQ75NE6 70 aa16.15■□□□□ 0.18
COL9A3-213ENST00000489045 PRELID1Q9Y255 219 aa16.15■□□□□ 0.18
COL9A3-213ENST00000489045 EXOC3-AS1Q8N2X6 119 aa16.14■□□□□ 0.17
COL9A3-213ENST00000489045 PPP1R1CQ8WVI7 109 aa16.14■□□□□ 0.17
COL9A3-213ENST00000489045 FAM167A-AS1Q96KT0 104 aa16.14■□□□□ 0.17
COL9A3-213ENST00000489045 WDR61Q9GZS3 305 aaKnown RBP16.14■□□□□ 0.17
COL9A3-213ENST00000489045 A0A1B0GVY2 172 aa16.13■□□□□ 0.17
COL9A3-213ENST00000489045 PRSS29PA6NIE9 313 aa16.13■□□□□ 0.17
COL9A3-213ENST00000489045 SSNA1O43805 119 aa16.13■□□□□ 0.17
COL9A3-213ENST00000489045 NUDT3O95989 172 aa16.13■□□□□ 0.17
COL9A3-213ENST00000489045 DEFA1P59665 94 aa16.13■□□□□ 0.17
COL9A3-213ENST00000489045 DEFA3P59666 94 aa16.13■□□□□ 0.17
COL9A3-213ENST00000489045 ATG101Q9BSB4 218 aa16.13■□□□□ 0.17
COL9A3-213ENST00000489045 AAMDCQ9H7C9 122 aa16.13■□□□□ 0.17
COL9A3-213ENST00000489045 KCNIP2Q9NS61 270 aa16.13■□□□□ 0.17
COL9A3-213ENST00000489045 LINC00612Q8N6U2 182 aa16.12■□□□□ 0.17
COL9A3-213ENST00000489045 PYGO2Q9BRQ0 406 aa16.12■□□□□ 0.17
COL9A3-213ENST00000489045 SNURFLB1AK76 121 aa16.11■□□□□ 0.17
COL9A3-213ENST00000489045 SLC25A5P05141 298 aaKnown RBP16.11■□□□□ 0.17
COL9A3-213ENST00000489045 FAM3BP58499 235 aaPredicted RBP16.11■□□□□ 0.17
COL9A3-213ENST00000489045 ICAM4Q14773 271 aa16.11■□□□□ 0.17
COL9A3-213ENST00000489045 LINC00477Q96M19 166 aa16.11■□□□□ 0.17
COL9A3-213ENST00000489045 ATP5SQ99766 215 aa16.11■□□□□ 0.17
COL9A3-213ENST00000489045 MRPL32Q9BYC8 188 aaKnown RBP16.11■□□□□ 0.17
COL9A3-213ENST00000489045 AGPAT4-IT1Q9H0P7 198 aa16.11■□□□□ 0.17
COL9A3-213ENST00000489045 OR51M1Q9H341 326 aa16.11■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 52.1 ms