RNA–Protein interactions for RNA: ENST00000489037.1

BRCA1-218, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 4

Gene BRCA1, Length 455 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-218ENST00000489037 PYYP10082 97 aa10.29□□□□□ -0.76
BRCA1-218ENST00000489037 CDKN1BP46527 198 aa10.29□□□□□ -0.76
BRCA1-218ENST00000489037 TAS2R45P59539 299 aa10.29□□□□□ -0.76
BRCA1-218ENST00000489037 ZNF266Q14584 549 aa10.29□□□□□ -0.76
BRCA1-218ENST00000489037 C1orf158Q8N1D5 194 aa10.29□□□□□ -0.76
BRCA1-218ENST00000489037 INO80EQ8NBZ0 244 aaPredicted RBP10.29□□□□□ -0.76
BRCA1-218ENST00000489037 MRPL53Q96EL3 112 aaKnown RBP10.29□□□□□ -0.76
BRCA1-218ENST00000489037 PAXXQ9BUH6 204 aa10.29□□□□□ -0.76
BRCA1-218ENST00000489037 SLC25A2Q9BXI2 301 aa10.29□□□□□ -0.76
BRCA1-218ENST00000489037 TRAV10A0A0B4J240 114 aa10.28□□□□□ -0.76
BRCA1-218ENST00000489037 LOC102723971A0A1B0GUV8 181 aa10.28□□□□□ -0.76
BRCA1-218ENST00000489037 OR7C2O60412 319 aa10.28□□□□□ -0.76
BRCA1-218ENST00000489037 NBEAP1P0C6P0 100 aa10.28□□□□□ -0.76
BRCA1-218ENST00000489037 ACOT6Q3I5F7 207 aaPredicted RBP10.28□□□□□ -0.76
BRCA1-218ENST00000489037 TMEM256Q8N2U0 113 aa10.28□□□□□ -0.76
BRCA1-218ENST00000489037 TRAV12-2A0A075B6T6 113 aa10.27□□□□□ -0.77
BRCA1-218ENST00000489037 A0A1W2PPV4 95 aa10.27□□□□□ -0.77
BRCA1-218ENST00000489037 CRXO43186 299 aaPredicted RBP10.27□□□□□ -0.77
BRCA1-218ENST00000489037 TCTAP57738 103 aa10.27□□□□□ -0.77
BRCA1-218ENST00000489037 BAP18Q8IXM2 172 aa10.27□□□□□ -0.77
BRCA1-218ENST00000489037 RNF141Q8WVD5 230 aa10.27□□□□□ -0.77
BRCA1-218ENST00000489037 FAM167A-AS1Q96KT0 104 aa10.27□□□□□ -0.77
BRCA1-218ENST00000489037 AQP10Q96PS8 301 aa10.27□□□□□ -0.77
BRCA1-218ENST00000489037 LINC01587Q99440 93 aa10.27□□□□□ -0.77
BRCA1-218ENST00000489037 WFDC1Q9HC57 220 aa10.27□□□□□ -0.77
BRCA1-218ENST00000489037 PRAC2D3DTV9 90 aa10.26□□□□□ -0.77
BRCA1-218ENST00000489037 LY6G6CO95867 125 aa10.26□□□□□ -0.77
BRCA1-218ENST00000489037 PRB4P10163 310 aaPredicted RBP10.26□□□□□ -0.77
BRCA1-218ENST00000489037 LEPP41159 167 aa10.26□□□□□ -0.77
BRCA1-218ENST00000489037 OXA1LQ15070 435 aa10.26□□□□□ -0.77
BRCA1-218ENST00000489037 KHDC3LQ587J8 217 aa10.26□□□□□ -0.77
BRCA1-218ENST00000489037 Q6ZTC4 211 aa10.26□□□□□ -0.77
BRCA1-218ENST00000489037 RPP25LQ8N5L8 163 aaKnown RBP10.26□□□□□ -0.77
BRCA1-218ENST00000489037 C20orf144Q9BQM9 153 aa10.26□□□□□ -0.77
BRCA1-218ENST00000489037 CELA1Q9UNI1 258 aa10.26□□□□□ -0.77
BRCA1-218ENST00000489037 RYR3Q15413 4870 aa10.25□□□□□ -0.77
BRCA1-218ENST00000489037 FXYD6-FXYD2A0A087WZ82 144 aa10.25□□□□□ -0.77
BRCA1-218ENST00000489037 ZNF705GA8MUZ8 300 aaPredicted RBP10.25□□□□□ -0.77
BRCA1-218ENST00000489037 IGLL5B9A064 214 aa10.25□□□□□ -0.77
BRCA1-218ENST00000489037 NDUFB4O95168 129 aa10.25□□□□□ -0.77
BRCA1-218ENST00000489037 OR10J4P0C629 311 aa10.25□□□□□ -0.77
BRCA1-218ENST00000489037 M6PRP20645 277 aa10.25□□□□□ -0.77
BRCA1-218ENST00000489037 ICAM4Q14773 271 aa10.25□□□□□ -0.77
BRCA1-218ENST00000489037 C12orf74Q32Q52 190 aa10.25□□□□□ -0.77
BRCA1-218ENST00000489037 EXOC3-AS1Q8N2X6 119 aa10.25□□□□□ -0.77
BRCA1-218ENST00000489037 OR2T35Q8NGX2 323 aa10.25□□□□□ -0.77
BRCA1-218ENST00000489037 LINC00476Q8WZB0 136 aa10.25□□□□□ -0.77
BRCA1-218ENST00000489037 ODF3Q96PU9 254 aa10.25□□□□□ -0.77
BRCA1-218ENST00000489037 NIPSNAP3BQ9BS92 247 aa10.25□□□□□ -0.77
BRCA1-218ENST00000489037 YTHDF2Q9Y5A9 579 aaKnown RBP10.25□□□□□ -0.77
BRCA1-218ENST00000489037 LYSTQ99698 3801 aa10.25□□□□□ -0.77
BRCA1-218ENST00000489037 DEFB131BA0A096LNP1 70 aa10.24□□□□□ -0.77
BRCA1-218ENST00000489037 NPIPB6E9PJ23 425 aa10.24□□□□□ -0.77
BRCA1-218ENST00000489037 M0R3E3 92 aa10.24□□□□□ -0.77
BRCA1-218ENST00000489037 HTN1P15515 57 aa10.24□□□□□ -0.77
BRCA1-218ENST00000489037 CSN1S1P47710 185 aa10.24□□□□□ -0.77
BRCA1-218ENST00000489037 TAS2R60P59551 318 aa10.24□□□□□ -0.77
BRCA1-218ENST00000489037 UBE2L3P68036 154 aaKnown RBP10.24□□□□□ -0.77
BRCA1-218ENST00000489037 FAM222AQ5U5X8 452 aa10.24□□□□□ -0.77
BRCA1-218ENST00000489037 ZNF767PQ75MW2 155 aa10.24□□□□□ -0.77
BRCA1-218ENST00000489037 HSD17B11Q8NBQ5 300 aa10.24□□□□□ -0.77
BRCA1-218ENST00000489037 LINC00477Q96M19 166 aa10.24□□□□□ -0.77
BRCA1-218ENST00000489037 DKK2Q9UBU2 259 aa10.24□□□□□ -0.77
BRCA1-218ENST00000489037 PLECQ15149 4684 aaKnown RBP10.23□□□□□ -0.77
BRCA1-218ENST00000489037 SACSQ9NZJ4 4579 aa10.23□□□□□ -0.77
BRCA1-218ENST00000489037 BORCS7-ASMTA0A0B4J1R7 106 aa10.23□□□□□ -0.77
BRCA1-218ENST00000489037 H7BYZ3 331 aa10.23□□□□□ -0.77
BRCA1-218ENST00000489037 TMEM78Q5T7P6 136 aa10.23□□□□□ -0.77
BRCA1-218ENST00000489037 FAM122CQ6P4D5 195 aa10.23□□□□□ -0.77
BRCA1-218ENST00000489037 CCDC28AQ8IWP9 274 aa10.23□□□□□ -0.77
BRCA1-218ENST00000489037 LYPD1Q8N2G4 141 aa10.23□□□□□ -0.77
BRCA1-218ENST00000489037 OR10G4Q8NGN3 311 aa10.23□□□□□ -0.77
BRCA1-218ENST00000489037 OR10G9Q8NGN4 311 aa10.23□□□□□ -0.77
BRCA1-218ENST00000489037 OR10G7Q8NGN6 311 aa10.23□□□□□ -0.77
BRCA1-218ENST00000489037 FXYD5Q96DB9 178 aa10.23□□□□□ -0.77
BRCA1-218ENST00000489037 J3KRW8 73 aa10.22□□□□□ -0.77
BRCA1-218ENST00000489037 MBP02144 154 aa10.22□□□□□ -0.77
BRCA1-218ENST00000489037 CT45A10P0DMU9 189 aa10.22□□□□□ -0.77
BRCA1-218ENST00000489037 DAD1P61803 113 aa10.22□□□□□ -0.77
BRCA1-218ENST00000489037 RANP62826 216 aaKnown RBP10.22□□□□□ -0.77
BRCA1-218ENST00000489037 Q5BKY6 102 aa10.22□□□□□ -0.77
BRCA1-218ENST00000489037 FAM74A1Q5RGS3 127 aa10.22□□□□□ -0.77
BRCA1-218ENST00000489037 PQLC2Q6ZP29 291 aa10.22□□□□□ -0.77
BRCA1-218ENST00000489037 C16orf74Q96GX8 76 aa10.22□□□□□ -0.77
BRCA1-218ENST00000489037 PSMG3Q9BT73 122 aaPredicted RBP10.22□□□□□ -0.77
BRCA1-218ENST00000489037 RYR2Q92736 4967 aa10.22□□□□□ -0.77
BRCA1-218ENST00000489037 ALMS1Q8TCU4 4167 aa10.22□□□□□ -0.77
BRCA1-218ENST00000489037 LYRM9A8MSI8 78 aa10.21□□□□□ -0.77
BRCA1-218ENST00000489037 SLC25A5P05141 298 aaKnown RBP10.21□□□□□ -0.77
BRCA1-218ENST00000489037 RAB2AP61019 212 aa10.21□□□□□ -0.77
BRCA1-218ENST00000489037 SERF2P84101 59 aa10.21□□□□□ -0.77
BRCA1-218ENST00000489037 ERCC8Q13216 396 aa10.21□□□□□ -0.77
BRCA1-218ENST00000489037 GFI1BQ5VTD9 330 aa10.21□□□□□ -0.77
BRCA1-218ENST00000489037 LGALS9CQ6DKI2 356 aa10.21□□□□□ -0.77
BRCA1-218ENST00000489037 ZNF493Q6ZR52 646 aa10.21□□□□□ -0.77
BRCA1-218ENST00000489037 OR2G3Q8NGZ4 309 aa10.21□□□□□ -0.77
BRCA1-218ENST00000489037 GNPNAT1Q96EK6 184 aaPredicted RBP10.21□□□□□ -0.77
BRCA1-218ENST00000489037 PHYHIPLQ96FC7 376 aa10.21□□□□□ -0.77
BRCA1-218ENST00000489037 Q9H3A6 140 aa10.21□□□□□ -0.77
BRCA1-218ENST00000489037 TNFSF18Q9UNG2 199 aa10.21□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 51.5 ms