RNA–Protein interactions for RNA: ENST00000488973.6

HMG20B-213, Transcript of high mobility group 20B, humanhuman

TSL 1 (best)

Gene HMG20B, Length 2,434 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMG20B-213ENST00000488973 CFAP47Q6ZTR5 3102 aa15.38■□□□□ 0.05
HMG20B-213ENST00000488973 MUC6Q6W4X9 2439 aa15.38■□□□□ 0.05
HMG20B-213ENST00000488973 BUB1B-PAK6H3BSN5 160 aa15.37■□□□□ 0.05
HMG20B-213ENST00000488973 FOXE3Q13461 319 aa15.37■□□□□ 0.05
HMG20B-213ENST00000488973 LGALS9BQ3B8N2 356 aa15.37■□□□□ 0.05
HMG20B-213ENST00000488973 LGALS9CQ6DKI2 356 aa15.37■□□□□ 0.05
HMG20B-213ENST00000488973 SPCS1Q9Y6A9 102 aa15.37■□□□□ 0.05
HMG20B-213ENST00000488973 ZFHX2Q9C0A1 2572 aaPredicted RBP15.37■□□□□ 0.05
HMG20B-213ENST00000488973 THBDP07204 575 aa15.37■□□□□ 0.05
HMG20B-213ENST00000488973 ROS1P08922 2347 aa15.37■□□□□ 0.05
HMG20B-213ENST00000488973 MRPS12O15235 138 aaKnown RBP15.36■□□□□ 0.05
HMG20B-213ENST00000488973 CT45A10P0DMU9 189 aa15.36■□□□□ 0.05
HMG20B-213ENST00000488973 ZNF414Q96IQ9 312 aa15.36■□□□□ 0.05
HMG20B-213ENST00000488973 RNF5Q99942 180 aa15.36■□□□□ 0.05
HMG20B-213ENST00000488973 TPPP3Q9BW30 176 aa15.36■□□□□ 0.05
HMG20B-213ENST00000488973 SIGLEC8Q9NYZ4 499 aa15.36■□□□□ 0.05
HMG20B-213ENST00000488973 SNAI2O43623 268 aa15.36■□□□□ 0.05
HMG20B-213ENST00000488973 FAM106CPP0CH98 169 aa15.36■□□□□ 0.05
HMG20B-213ENST00000488973 FAM106AQ4KMX7 169 aa15.36■□□□□ 0.05
HMG20B-213ENST00000488973 ZNF491Q8N8L2 437 aa15.36■□□□□ 0.05
HMG20B-213ENST00000488973 ASCL2Q99929 193 aa15.36■□□□□ 0.05
HMG20B-213ENST00000488973 RIF1Q5UIP0 2472 aaKnown RBP15.36■□□□□ 0.05
HMG20B-213ENST00000488973 RP1L1Q8IWN7 2480 aaPredicted RBP15.36■□□□□ 0.05
HMG20B-213ENST00000488973 ZGRF1Q86YA3 2104 aa15.36■□□□□ 0.05
HMG20B-213ENST00000488973 A0A1W2PPM0 123 aa15.35■□□□□ 0.05
HMG20B-213ENST00000488973 D6R8Y8 96 aa15.35■□□□□ 0.05
HMG20B-213ENST00000488973 K7EIM0 57 aa15.35■□□□□ 0.05
HMG20B-213ENST00000488973 FAM104BQ5XKR9 115 aa15.35■□□□□ 0.05
HMG20B-213ENST00000488973 PIP4P2Q8N4L2 257 aa15.35■□□□□ 0.05
HMG20B-213ENST00000488973 OR8A1Q8NGG7 326 aa15.35■□□□□ 0.05
HMG20B-213ENST00000488973 A0A0G2JNJ9 132 aa15.35■□□□□ 0.05
HMG20B-213ENST00000488973 BOD1L2Q8IYS8 172 aa15.35■□□□□ 0.05
HMG20B-213ENST00000488973 PRELID3AQ96N28 172 aa15.35■□□□□ 0.05
HMG20B-213ENST00000488973 Q9UFV3 132 aa15.35■□□□□ 0.05
HMG20B-213ENST00000488973 BOD1L1Q8NFC6 3051 aa15.35■□□□□ 0.05
HMG20B-213ENST00000488973 LOXL1Q08397 574 aaPredicted RBP15.34■□□□□ 0.05
HMG20B-213ENST00000488973 ODF1Q14990 250 aa15.34■□□□□ 0.05
HMG20B-213ENST00000488973 ORMDL3Q8N138 153 aa15.34■□□□□ 0.05
HMG20B-213ENST00000488973 RNF125Q96EQ8 232 aa15.34■□□□□ 0.05
HMG20B-213ENST00000488973 RABAC1Q9UI14 185 aa15.34■□□□□ 0.05
HMG20B-213ENST00000488973 RALYQ9UKM9 306 aaKnown RBP15.34■□□□□ 0.05
HMG20B-213ENST00000488973 PDE6HQ13956 83 aa15.34■□□□□ 0.05
HMG20B-213ENST00000488973 LYZL1Q6UWQ5 148 aa15.34■□□□□ 0.05
HMG20B-213ENST00000488973 DYNLRB1Q9NP97 96 aa15.34■□□□□ 0.05
HMG20B-213ENST00000488973 GVINP1Q7Z2Y8 2422 aa15.34■□□□□ 0.05
HMG20B-213ENST00000488973 TRBV7-9A0A0J9YWB2 115 aa15.33■□□□□ 0.04
HMG20B-213ENST00000488973 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP15.33■□□□□ 0.04
HMG20B-213ENST00000488973 DLX1P56177 255 aa15.33■□□□□ 0.04
HMG20B-213ENST00000488973 HERV-K104P63124 156 aa15.33■□□□□ 0.04
HMG20B-213ENST00000488973 ZNF418Q8TF45 676 aaPredicted RBP15.33■□□□□ 0.04
HMG20B-213ENST00000488973 C8orf49Q96NF6 230 aa15.33■□□□□ 0.04
HMG20B-213ENST00000488973 LOC389332A0A1B0GUA5 103 aa15.33■□□□□ 0.04
HMG20B-213ENST00000488973 SIVA1O15304 175 aa15.33■□□□□ 0.04
HMG20B-213ENST00000488973 PLGLAQ15195 96 aa15.33■□□□□ 0.04
HMG20B-213ENST00000488973 OR9G4Q8NGQ1 327 aa15.33■□□□□ 0.04
HMG20B-213ENST00000488973 RPEQ96AT9 228 aa15.33■□□□□ 0.04
HMG20B-213ENST00000488973 WI2-2373I1.2A0A1W2PRP0 233 aa15.32■□□□□ 0.04
HMG20B-213ENST00000488973 M0R3E3 92 aa15.32■□□□□ 0.04
HMG20B-213ENST00000488973 IL4P05112 153 aa15.32■□□□□ 0.04
HMG20B-213ENST00000488973 SS18L2Q9UHA2 77 aa15.32■□□□□ 0.04
HMG20B-213ENST00000488973 HBDP02042 147 aa15.32■□□□□ 0.04
HMG20B-213ENST00000488973 CLEC3BP05452 202 aa15.32■□□□□ 0.04
HMG20B-213ENST00000488973 AMN1Q8IY45 258 aa15.32■□□□□ 0.04
HMG20B-213ENST00000488973 AAMDCQ9H7C9 122 aa15.32■□□□□ 0.04
HMG20B-213ENST00000488973 PKDREJQ9NTG1 2253 aa15.31■□□□□ 0.04
HMG20B-213ENST00000488973 TMEM213A2RRL7 107 aa15.31■□□□□ 0.04
HMG20B-213ENST00000488973 SMAD7O15105 426 aaKnown RBP15.31■□□□□ 0.04
HMG20B-213ENST00000488973 CNIH1O95406 144 aa15.31■□□□□ 0.04
HMG20B-213ENST00000488973 FCGR2BP31994 310 aaPredicted RBP15.31■□□□□ 0.04
HMG20B-213ENST00000488973 PAX8Q06710 450 aa15.31■□□□□ 0.04
HMG20B-213ENST00000488973 FABP2P12104 132 aa15.31■□□□□ 0.04
HMG20B-213ENST00000488973 COX8CQ7Z4L0 72 aa15.31■□□□□ 0.04
HMG20B-213ENST00000488973 UQCRFS1P47985 274 aa15.3■□□□□ 0.04
HMG20B-213ENST00000488973 CACNG7P62955 275 aa15.3■□□□□ 0.04
HMG20B-213ENST00000488973 PRB3Q04118 309 aaPredicted RBP15.3■□□□□ 0.04
HMG20B-213ENST00000488973 MRPL51Q4U2R6 128 aaKnown RBP15.3■□□□□ 0.04
HMG20B-213ENST00000488973 A1L4Q6 167 aa15.29■□□□□ 0.04
HMG20B-213ENST00000488973 SH2D1AO60880 128 aa15.29■□□□□ 0.04
HMG20B-213ENST00000488973 RAB1BQ9H0U4 201 aa15.29■□□□□ 0.04
HMG20B-213ENST00000488973 SELENOKQ9Y6D0 94 aa15.29■□□□□ 0.04
HMG20B-213ENST00000488973 LY6LH3BQJ8 138 aa15.29■□□□□ 0.04
HMG20B-213ENST00000488973 KIR3DS1Q14943 382 aa15.29■□□□□ 0.04
HMG20B-213ENST00000488973 OR4X2Q8NGF9 303 aa15.29■□□□□ 0.04
HMG20B-213ENST00000488973 TNFRSF18Q9Y5U5 241 aa15.29■□□□□ 0.04
HMG20B-213ENST00000488973 PRRG2O14669 202 aa15.28■□□□□ 0.04
HMG20B-213ENST00000488973 COX7A1P24310 79 aa15.28■□□□□ 0.04
HMG20B-213ENST00000488973 TMSB15BA0A087X1C1 80 aa15.28■□□□□ 0.04
HMG20B-213ENST00000488973 PRB4P10163 310 aaPredicted RBP15.28■□□□□ 0.04
HMG20B-213ENST00000488973 IFI27L1Q96BM0 104 aa15.28■□□□□ 0.04
HMG20B-213ENST00000488973 ERG28Q9UKR5 140 aa15.28■□□□□ 0.04
HMG20B-213ENST00000488973 SHISA9B4DS77 424 aa15.27■□□□□ 0.04
HMG20B-213ENST00000488973 E7EQL1 145 aa15.27■□□□□ 0.04
HMG20B-213ENST00000488973 FOXC1Q12948 553 aa15.27■□□□□ 0.04
HMG20B-213ENST00000488973 ADAMTSL5Q6ZMM2 481 aa15.27■□□□□ 0.04
HMG20B-213ENST00000488973 CEP250Q9BV73 2442 aa15.27■□□□□ 0.04
HMG20B-213ENST00000488973 SPANXB1Q9NS25 103 aaPredicted RBP15.27■□□□□ 0.03
HMG20B-213ENST00000488973 FBLL1A6NHQ2 334 aaKnown RBP15.26■□□□□ 0.03
HMG20B-213ENST00000488973 GAGE5Q13069 117 aa15.26■□□□□ 0.03
HMG20B-213ENST00000488973 GAGE6Q13070 117 aa15.26■□□□□ 0.03
HMG20B-213ENST00000488973 HIF1ANQ9NWT6 349 aa15.26■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 73 ms