RNA–Protein interactions for RNA: ENST00000488910.1

ATG3-205, Transcript of autophagy related 3, humanhuman

TSL 2

Gene ATG3, Length 681 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG3-205ENST00000488910 MPC2O95563 127 aa12.47□□□□□ -0.41
ATG3-205ENST00000488910 HIST1H1EP10412 219 aaKnown RBP12.47□□□□□ -0.41
ATG3-205ENST00000488910 TSPOP30536 169 aa12.47□□□□□ -0.41
ATG3-205ENST00000488910 CDKN1BP46527 198 aa12.47□□□□□ -0.41
ATG3-205ENST00000488910 CLINT1Q14677 625 aa12.47□□□□□ -0.41
ATG3-205ENST00000488910 KCNIP2Q9NS61 270 aa12.47□□□□□ -0.41
ATG3-205ENST00000488910 ZNF586Q9NXT0 402 aa12.47□□□□□ -0.41
ATG3-205ENST00000488910 TRBV19A0A075B6N1 114 aa12.46□□□□□ -0.41
ATG3-205ENST00000488910 ZNF705GA8MUZ8 300 aaPredicted RBP12.46□□□□□ -0.41
ATG3-205ENST00000488910 PDE6HQ13956 83 aa12.46□□□□□ -0.41
ATG3-205ENST00000488910 RPP25LQ8N5L8 163 aaKnown RBP12.46□□□□□ -0.41
ATG3-205ENST00000488910 FAM210BQ96KR6 192 aa12.46□□□□□ -0.41
ATG3-205ENST00000488910 LINC01587Q99440 93 aa12.46□□□□□ -0.41
ATG3-205ENST00000488910 NDUFAF3Q9BU61 184 aa12.46□□□□□ -0.41
ATG3-205ENST00000488910 WDR61Q9GZS3 305 aaKnown RBP12.46□□□□□ -0.41
ATG3-205ENST00000488910 PRAC2D3DTV9 90 aa12.45□□□□□ -0.42
ATG3-205ENST00000488910 C17orf112F2Z3M2 114 aa12.45□□□□□ -0.42
ATG3-205ENST00000488910 TAS2R60P59551 318 aa12.45□□□□□ -0.42
ATG3-205ENST00000488910 MRPL53Q96EL3 112 aaKnown RBP12.45□□□□□ -0.42
ATG3-205ENST00000488910 ATP5SQ99766 215 aa12.45□□□□□ -0.42
ATG3-205ENST00000488910 C20orf144Q9BQM9 153 aa12.45□□□□□ -0.42
ATG3-205ENST00000488910 PRELID1Q9Y255 219 aa12.45□□□□□ -0.42
ATG3-205ENST00000488910 LYRM9A8MSI8 78 aa12.44□□□□□ -0.42
ATG3-205ENST00000488910 GCSAMLQ5JQS6 135 aa12.44□□□□□ -0.42
ATG3-205ENST00000488910 HSPB11Q9Y547 144 aa12.44□□□□□ -0.42
ATG3-205ENST00000488910 TIMM9Q9Y5J7 89 aa12.44□□□□□ -0.42
ATG3-205ENST00000488910 DNAH6Q9C0G6 4158 aa12.44□□□□□ -0.42
ATG3-205ENST00000488910 PRM2P04554 102 aa12.43□□□□□ -0.42
ATG3-205ENST00000488910 PRB4P10163 310 aaPredicted RBP12.43□□□□□ -0.42
ATG3-205ENST00000488910 RPL12P30050 165 aaKnown RBP12.43□□□□□ -0.42
ATG3-205ENST00000488910 DAD1P61803 113 aa12.43□□□□□ -0.42
ATG3-205ENST00000488910 ODF3Q96PU9 254 aa12.43□□□□□ -0.42
ATG3-205ENST00000488910 MRPL32Q9BYC8 188 aaKnown RBP12.43□□□□□ -0.42
ATG3-205ENST00000488910 PLA2G2EQ9NZK7 142 aa12.43□□□□□ -0.42
ATG3-205ENST00000488910 H7BYZ3 331 aa12.42□□□□□ -0.42
ATG3-205ENST00000488910 NDUFB4O95168 129 aa12.42□□□□□ -0.42
ATG3-205ENST00000488910 PTTG1O95997 202 aa12.42□□□□□ -0.42
ATG3-205ENST00000488910 PYYP10082 97 aa12.42□□□□□ -0.42
ATG3-205ENST00000488910 AZU1P20160 251 aa12.42□□□□□ -0.42
ATG3-205ENST00000488910 FAM167A-AS1Q96KT0 104 aa12.42□□□□□ -0.42
ATG3-205ENST00000488910 SLC25A2Q9BXI2 301 aa12.42□□□□□ -0.42
ATG3-205ENST00000488910 BIRC6Q9NR09 4857 aa12.42□□□□□ -0.42
ATG3-205ENST00000488910 NPIPB6E9PJ23 425 aa12.41□□□□□ -0.42
ATG3-205ENST00000488910 IFNA5P01569 189 aa12.41□□□□□ -0.42
ATG3-205ENST00000488910 P0DMU3 169 aa12.41□□□□□ -0.42
ATG3-205ENST00000488910 FAM231AP0DMU4 169 aa12.41□□□□□ -0.42
ATG3-205ENST00000488910 FAM231CP0DMU5 169 aa12.41□□□□□ -0.42
ATG3-205ENST00000488910 CT45A10P0DMU9 189 aa12.41□□□□□ -0.42
ATG3-205ENST00000488910 ZNF493Q6ZR52 646 aa12.41□□□□□ -0.42
ATG3-205ENST00000488910 MIR17HGQ75NE6 70 aa12.41□□□□□ -0.42
ATG3-205ENST00000488910 SCGB1C1Q8TD33 95 aa12.41□□□□□ -0.42
ATG3-205ENST00000488910 BLNKQ8WV28 456 aa12.41□□□□□ -0.42
ATG3-205ENST00000488910 C16orf74Q96GX8 76 aa12.41□□□□□ -0.42
ATG3-205ENST00000488910 LINC00477Q96M19 166 aa12.41□□□□□ -0.42
ATG3-205ENST00000488910 OR51M1Q9H341 326 aa12.41□□□□□ -0.42
ATG3-205ENST00000488910 MBD2Q9UBB5 411 aa12.41□□□□□ -0.42
ATG3-205ENST00000488910 ALG5Q9Y673 324 aa12.41□□□□□ -0.42
ATG3-205ENST00000488910 PLAC8L1A1L4L8 177 aa12.4□□□□□ -0.42
ATG3-205ENST00000488910 NBEAP1P0C6P0 100 aa12.4□□□□□ -0.42
ATG3-205ENST00000488910 LEPP41159 167 aa12.4□□□□□ -0.42
ATG3-205ENST00000488910 PARD6GQ9BYG4 376 aaPredicted RBP12.4□□□□□ -0.42
ATG3-205ENST00000488910 AAMDCQ9H7C9 122 aa12.4□□□□□ -0.42
ATG3-205ENST00000488910 FUT9Q9Y231 359 aa12.4□□□□□ -0.42
ATG3-205ENST00000488910 M0R3E3 92 aa12.39□□□□□ -0.43
ATG3-205ENST00000488910 HTN1P15515 57 aa12.39□□□□□ -0.43
ATG3-205ENST00000488910 HTN3P15516 51 aa12.39□□□□□ -0.43
ATG3-205ENST00000488910 GFI1BQ5VTD9 330 aa12.39□□□□□ -0.43
ATG3-205ENST00000488910 PAXXQ9BUH6 204 aa12.39□□□□□ -0.43
ATG3-205ENST00000488910 TIMM8BQ9Y5J9 83 aaPredicted RBP12.39□□□□□ -0.43
ATG3-205ENST00000488910 KIR3DS1Q14943 382 aa12.38□□□□□ -0.43
ATG3-205ENST00000488910 CCDC28AQ8IWP9 274 aa12.38□□□□□ -0.43
ATG3-205ENST00000488910 EXOC3-AS1Q8N2X6 119 aa12.38□□□□□ -0.43
ATG3-205ENST00000488910 POM121L12Q8N7R1 296 aa12.38□□□□□ -0.43
ATG3-205ENST00000488910 TMEM263Q8WUH6 116 aaKnown RBP12.38□□□□□ -0.43
ATG3-205ENST00000488910 RNF141Q8WVD5 230 aa12.38□□□□□ -0.43
ATG3-205ENST00000488910 SMIM3Q9BZL3 60 aa12.38□□□□□ -0.43
ATG3-205ENST00000488910 DEFB130BP0DP73 79 aa12.37□□□□□ -0.43
ATG3-205ENST00000488910 DEFB130AP0DP74 79 aa12.37□□□□□ -0.43
ATG3-205ENST00000488910 ICAM4Q14773 271 aa12.37□□□□□ -0.43
ATG3-205ENST00000488910 FFAR4Q5NUL3 377 aa12.37□□□□□ -0.43
ATG3-205ENST00000488910 RNASE8Q8TDE3 154 aaKnown RBP12.37□□□□□ -0.43
ATG3-205ENST00000488910 FXYD5Q96DB9 178 aa12.37□□□□□ -0.43
ATG3-205ENST00000488910 MED28Q9H204 178 aa12.37□□□□□ -0.43
ATG3-205ENST00000488910 FRAS1Q86XX4 4008 aa12.37□□□□□ -0.43
ATG3-205ENST00000488910 CBY3A6NI87 242 aa12.36□□□□□ -0.43
ATG3-205ENST00000488910 SLC25A5P05141 298 aaKnown RBP12.36□□□□□ -0.43
ATG3-205ENST00000488910 TAS2R45P59539 299 aa12.36□□□□□ -0.43
ATG3-205ENST00000488910 ERCC8Q13216 396 aa12.36□□□□□ -0.43
ATG3-205ENST00000488910 C9orf47Q6ZRZ4 202 aa12.36□□□□□ -0.43
ATG3-205ENST00000488910 LYPD1Q8N2G4 141 aa12.36□□□□□ -0.43
ATG3-205ENST00000488910 AGPAT4-IT1Q9H0P7 198 aa12.36□□□□□ -0.43
ATG3-205ENST00000488910 DNAH10Q8IVF4 4471 aa12.35□□□□□ -0.43
ATG3-205ENST00000488910 TRAV12-3A0A0B4J271 114 aa12.35□□□□□ -0.43
ATG3-205ENST00000488910 OR7C2O60412 319 aa12.35□□□□□ -0.43
ATG3-205ENST00000488910 NMBP08949 121 aa12.35□□□□□ -0.43
ATG3-205ENST00000488910 OR10J4P0C629 311 aa12.35□□□□□ -0.43
ATG3-205ENST00000488910 FCN2Q15485 313 aa12.35□□□□□ -0.43
ATG3-205ENST00000488910 TMEM88Q6PEY1 159 aa12.35□□□□□ -0.43
ATG3-205ENST00000488910 FAM19A4Q96LR4 140 aa12.35□□□□□ -0.43
ATG3-205ENST00000488910 PYGO2Q9BRQ0 406 aa12.35□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms