RNA–Protein interactions for RNA: ENST00000488897.5

COL16A1-215, Transcript of collagen type XVI alpha 1 chain, humanhuman

TSL 1 (best)

Gene COL16A1, Length 2,423 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL16A1-215ENST00000488897 ATOH7Q8N100 152 aa14.39□□□□□ -0.11
COL16A1-215ENST00000488897 PGLYRP4Q96LB8 373 aa14.39□□□□□ -0.11
COL16A1-215ENST00000488897 H3BTX0 84 aa14.39□□□□□ -0.11
COL16A1-215ENST00000488897 LINC00614P0C842 121 aa14.39□□□□□ -0.11
COL16A1-215ENST00000488897 Q56UQ5 140 aa14.39□□□□□ -0.11
COL16A1-215ENST00000488897 BCL6BQ8N143 479 aaPredicted RBP14.39□□□□□ -0.11
COL16A1-215ENST00000488897 CHCHD1Q96BP2 118 aaKnown RBP14.39□□□□□ -0.11
COL16A1-215ENST00000488897 RNF5Q99942 180 aa14.39□□□□□ -0.11
COL16A1-215ENST00000488897 ZFP30Q9Y2G7 519 aa14.39□□□□□ -0.11
COL16A1-215ENST00000488897 MRPS16Q9Y3D3 137 aaKnown RBP14.39□□□□□ -0.11
COL16A1-215ENST00000488897 SLC25A39Q9BZJ4 359 aaPredicted RBP14.38□□□□□ -0.11
COL16A1-215ENST00000488897 CENPVL3A0A0U1RRI6 287 aa14.37□□□□□ -0.11
COL16A1-215ENST00000488897 NPIPB6E9PJ23 425 aa14.37□□□□□ -0.11
COL16A1-215ENST00000488897 NPSP0C0P6 89 aa14.37□□□□□ -0.11
COL16A1-215ENST00000488897 URB1-AS1Q96HZ7 61 aa14.37□□□□□ -0.11
COL16A1-215ENST00000488897 SRSF8Q9BRL6 282 aaKnown RBP14.37□□□□□ -0.11
COL16A1-215ENST00000488897 JMJD1CQ15652 2540 aa14.37□□□□□ -0.11
COL16A1-215ENST00000488897 HOXB4P17483 251 aaPredicted RBP14.37□□□□□ -0.11
COL16A1-215ENST00000488897 TSPOP30536 169 aa14.37□□□□□ -0.11
COL16A1-215ENST00000488897 TFPI2P48307 235 aa14.37□□□□□ -0.11
COL16A1-215ENST00000488897 Q86TA4 180 aa14.37□□□□□ -0.11
COL16A1-215ENST00000488897 PIP4P2Q8N4L2 257 aa14.37□□□□□ -0.11
COL16A1-215ENST00000488897 SRSF12Q8WXF0 261 aaKnown RBP14.37□□□□□ -0.11
COL16A1-215ENST00000488897 RPEQ96AT9 228 aa14.37□□□□□ -0.11
COL16A1-215ENST00000488897 RASL11BQ9BPW5 248 aa14.37□□□□□ -0.11
COL16A1-215ENST00000488897 TMEM70Q9BUB7 260 aa14.37□□□□□ -0.11
COL16A1-215ENST00000488897 TRBV6-1A0A0K0K1D8 114 aa14.36□□□□□ -0.11
COL16A1-215ENST00000488897 I3L2K1 104 aa14.36□□□□□ -0.11
COL16A1-215ENST00000488897 RBP4P02753 201 aa14.36□□□□□ -0.11
COL16A1-215ENST00000488897 FBXL15Q9H469 300 aa14.36□□□□□ -0.11
COL16A1-215ENST00000488897 RNF24Q9Y225 148 aa14.36□□□□□ -0.11
COL16A1-215ENST00000488897 INAFM1C9JVW0 142 aa14.36□□□□□ -0.11
COL16A1-215ENST00000488897 CD24P25063 80 aa14.36□□□□□ -0.11
COL16A1-215ENST00000488897 MAJINQ3KP22 176 aa14.36□□□□□ -0.11
COL16A1-215ENST00000488897 NDFIP1Q9BT67 221 aa14.36□□□□□ -0.11
COL16A1-215ENST00000488897 C1RLQ9NZP8 487 aa14.36□□□□□ -0.11
COL16A1-215ENST00000488897 CHEK1O14757 476 aa14.35□□□□□ -0.11
COL16A1-215ENST00000488897 DYNAPQ8N1N2 210 aa14.35□□□□□ -0.11
COL16A1-215ENST00000488897 STPG4Q8N801 248 aa14.35□□□□□ -0.11
COL16A1-215ENST00000488897 FOXA3P55318 350 aaPredicted RBP14.35□□□□□ -0.11
COL16A1-215ENST00000488897 FAM120AOSQ5T036 256 aa14.35□□□□□ -0.11
COL16A1-215ENST00000488897 HILPDAQ9Y5L2 63 aa14.35□□□□□ -0.11
COL16A1-215ENST00000488897 HAX1O00165 279 aa14.34□□□□□ -0.11
COL16A1-215ENST00000488897 CRXO43186 299 aaPredicted RBP14.34□□□□□ -0.11
COL16A1-215ENST00000488897 SRSF2Q01130 221 aaKnown RBP14.34□□□□□ -0.11
COL16A1-215ENST00000488897 PLGLAQ15195 96 aa14.34□□□□□ -0.11
COL16A1-215ENST00000488897 IGLV2-11P01706 119 aa14.34□□□□□ -0.11
COL16A1-215ENST00000488897 IGLL1P15814 213 aa14.34□□□□□ -0.11
COL16A1-215ENST00000488897 DMRTA1Q5VZB9 504 aa14.34□□□□□ -0.11
COL16A1-215ENST00000488897 GOLT1AQ6ZVE7 132 aa14.34□□□□□ -0.11
COL16A1-215ENST00000488897 PRNTQ86SH4 94 aa14.34□□□□□ -0.11
COL16A1-215ENST00000488897 LOC102724200A0A096LPH7 203 aaPredicted RBP14.33□□□□□ -0.12
COL16A1-215ENST00000488897 TRAV8-1A0A0A6YYK1 113 aa14.33□□□□□ -0.12
COL16A1-215ENST00000488897 CD5LO43866 347 aa14.33□□□□□ -0.12
COL16A1-215ENST00000488897 PRTN3P24158 256 aa14.33□□□□□ -0.12
COL16A1-215ENST00000488897 C16orf54Q6UWD8 224 aa14.33□□□□□ -0.12
COL16A1-215ENST00000488897 EXOC3-AS1Q8N2X6 119 aa14.33□□□□□ -0.12
COL16A1-215ENST00000488897 DUX5Q96PT3 197 aa14.33□□□□□ -0.12
COL16A1-215ENST00000488897 CLEC5AQ9NY25 188 aa14.33□□□□□ -0.12
COL16A1-215ENST00000488897 FBLN7Q53RD9 439 aa14.33□□□□□ -0.12
COL16A1-215ENST00000488897 BPIFA4PQ86YQ2 179 aa14.33□□□□□ -0.12
COL16A1-215ENST00000488897 KIR3DL3Q8N743 410 aa14.33□□□□□ -0.12
COL16A1-215ENST00000488897 LEPROTL1O95214 131 aa14.32□□□□□ -0.12
COL16A1-215ENST00000488897 IGKV1-17P01599 117 aa14.32□□□□□ -0.12
COL16A1-215ENST00000488897 OR5AL1P0C617 328 aa14.32□□□□□ -0.12
COL16A1-215ENST00000488897 OR4F17Q8NGA8 305 aa14.32□□□□□ -0.12
COL16A1-215ENST00000488897 SHANK2-AS3Q9BTD1 123 aa14.32□□□□□ -0.12
COL16A1-215ENST00000488897 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP14.32□□□□□ -0.12
COL16A1-215ENST00000488897 IGHV1-24A0A0C4DH33 117 aa14.32□□□□□ -0.12
COL16A1-215ENST00000488897 LY6LH3BQJ8 138 aa14.32□□□□□ -0.12
COL16A1-215ENST00000488897 CNIH1O95406 144 aa14.32□□□□□ -0.12
COL16A1-215ENST00000488897 LYPD1Q8N2G4 141 aa14.32□□□□□ -0.12
COL16A1-215ENST00000488897 TMEM75Q8N9X5 138 aa14.32□□□□□ -0.12
COL16A1-215ENST00000488897 TRBV19A0A075B6N1 114 aa14.31□□□□□ -0.12
COL16A1-215ENST00000488897 K7EQM0 130 aa14.31□□□□□ -0.12
COL16A1-215ENST00000488897 SAA4P35542 130 aa14.31□□□□□ -0.12
COL16A1-215ENST00000488897 PRR31Q5SQ13 230 aa14.31□□□□□ -0.12
COL16A1-215ENST00000488897 OR4C46A6NHA9 309 aa14.31□□□□□ -0.12
COL16A1-215ENST00000488897 SH2D7A6NKC9 451 aaPredicted RBP14.31□□□□□ -0.12
COL16A1-215ENST00000488897 SYS1-DBNDD2H3BUS1 97 aa14.31□□□□□ -0.12
COL16A1-215ENST00000488897 M0R1W7 72 aa14.31□□□□□ -0.12
COL16A1-215ENST00000488897 NDUFB8O95169 186 aa14.31□□□□□ -0.12
COL16A1-215ENST00000488897 APOHP02749 345 aaPredicted RBP14.31□□□□□ -0.12
COL16A1-215ENST00000488897 M0QZ24 198 aa14.3□□□□□ -0.12
COL16A1-215ENST00000488897 SPATA12Q7Z6I5 190 aa14.3□□□□□ -0.12
COL16A1-215ENST00000488897 A0A1B0GUT8 65 aa14.3□□□□□ -0.12
COL16A1-215ENST00000488897 H3BRN7 92 aa14.3□□□□□ -0.12
COL16A1-215ENST00000488897 K7EIM0 57 aa14.3□□□□□ -0.12
COL16A1-215ENST00000488897 HINT1P49773 126 aaPredicted RBP14.3□□□□□ -0.12
COL16A1-215ENST00000488897 ORAOV1Q8WV07 137 aa14.3□□□□□ -0.12
COL16A1-215ENST00000488897 AJUBAQ96IF1 538 aa14.3□□□□□ -0.12
COL16A1-215ENST00000488897 ST20Q9HBF5 79 aa14.3□□□□□ -0.12
COL16A1-215ENST00000488897 RIGQ13278 110 aa14.29□□□□□ -0.12
COL16A1-215ENST00000488897 PPP1R14DQ9NXH3 145 aa14.29□□□□□ -0.12
COL16A1-215ENST00000488897 S100A7AQ86SG5 101 aa14.29□□□□□ -0.12
COL16A1-215ENST00000488897 A0A1B0GW15 77 aa14.28□□□□□ -0.12
COL16A1-215ENST00000488897 ZC2HC1AQ96GY0 325 aa14.28□□□□□ -0.12
COL16A1-215ENST00000488897 TMEM191AQ9H0A3 160 aa14.28□□□□□ -0.12
COL16A1-215ENST00000488897 IGHV1-69DA0A0B4J2H0 117 aa14.27□□□□□ -0.12
COL16A1-215ENST00000488897 TIMM23O14925 209 aa14.27□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 70 ms