RNA–Protein interactions for RNA: ENST00000488860.1

TRAIP-209, Transcript of TRAF interacting protein, humanhuman

TSL 3

Gene TRAIP, Length 326 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAIP-209ENST00000488860 ATP5G3P48201 142 aa9.16□□□□□ -0.94
TRAIP-209ENST00000488860 CMC4P56277 68 aaPredicted RBP9.16□□□□□ -0.94
TRAIP-209ENST00000488860 GNG5P63218 68 aa9.16□□□□□ -0.94
TRAIP-209ENST00000488860 HAGHQ16775 308 aa9.16□□□□□ -0.94
TRAIP-209ENST00000488860 ACTL10Q5JWF8 245 aa9.16□□□□□ -0.94
TRAIP-209ENST00000488860 KPRPQ5T749 579 aaPredicted RBP9.16□□□□□ -0.94
TRAIP-209ENST00000488860 LYPD1Q8N2G4 141 aa9.16□□□□□ -0.94
TRAIP-209ENST00000488860 DEFB125Q8N687 156 aa9.16□□□□□ -0.94
TRAIP-209ENST00000488860 CMTM2Q8TAZ6 248 aa9.16□□□□□ -0.94
TRAIP-209ENST00000488860 RPUSD4Q96CM3 377 aaKnown RBP9.16□□□□□ -0.94
TRAIP-209ENST00000488860 AURKAIP1Q9NWT8 199 aaPredicted RBP9.16□□□□□ -0.94
TRAIP-209ENST00000488860 CLEC5AQ9NY25 188 aa9.16□□□□□ -0.94
TRAIP-209ENST00000488860 PRELID1Q9Y255 219 aa9.16□□□□□ -0.94
TRAIP-209ENST00000488860 A0A1W2PRE2 83 aa9.15□□□□□ -0.94
TRAIP-209ENST00000488860 ZNF705DP0CH99 300 aaPredicted RBP9.15□□□□□ -0.94
TRAIP-209ENST00000488860 ZNF705BP0CI00 300 aaPredicted RBP9.15□□□□□ -0.94
TRAIP-209ENST00000488860 CSN1S1P47710 185 aa9.15□□□□□ -0.94
TRAIP-209ENST00000488860 SUMO1P63165 101 aaKnown RBP9.15□□□□□ -0.94
TRAIP-209ENST00000488860 EBLN2Q6P2I7 272 aa9.15□□□□□ -0.94
TRAIP-209ENST00000488860 MRPL53Q96EL3 112 aaKnown RBP9.15□□□□□ -0.94
TRAIP-209ENST00000488860 SRD5A3Q9H8P0 318 aa9.15□□□□□ -0.94
TRAIP-209ENST00000488860 C19orf73Q9NVV2 129 aa9.15□□□□□ -0.94
TRAIP-209ENST00000488860 IGKV2-40A0A087WW87 121 aaPredicted RBP9.14□□□□□ -0.95
TRAIP-209ENST00000488860 PRAC2D3DTV9 90 aa9.14□□□□□ -0.95
TRAIP-209ENST00000488860 IGKV2D-40P01614 121 aaPredicted RBP9.14□□□□□ -0.95
TRAIP-209ENST00000488860 BCL2P10415 239 aa9.14□□□□□ -0.95
TRAIP-209ENST00000488860 HIST1H1AQ02539 215 aaPredicted RBP9.14□□□□□ -0.95
TRAIP-209ENST00000488860 GDF5OSQ5U4N7 250 aa9.14□□□□□ -0.95
TRAIP-209ENST00000488860 FOXI2Q6ZQN5 318 aa9.14□□□□□ -0.95
TRAIP-209ENST00000488860 STHQ8IWL8 128 aa9.14□□□□□ -0.95
TRAIP-209ENST00000488860 FAM110AQ9BQ89 295 aa9.14□□□□□ -0.95
TRAIP-209ENST00000488860 ARL2-SNX15V9GYD0 113 aa9.14□□□□□ -0.95
TRAIP-209ENST00000488860 MGAM2Q2M2H8 2515 aa9.13□□□□□ -0.95
TRAIP-209ENST00000488860 C11orf94C9JXX5 98 aa9.13□□□□□ -0.95
TRAIP-209ENST00000488860 IGKV3-20P01619 116 aa9.13□□□□□ -0.95
TRAIP-209ENST00000488860 TOR2AQ5JU69 321 aa9.13□□□□□ -0.95
TRAIP-209ENST00000488860 GOLT1AQ6ZVE7 132 aa9.13□□□□□ -0.95
TRAIP-209ENST00000488860 Q8N1Y9 231 aa9.13□□□□□ -0.95
TRAIP-209ENST00000488860 C5orf17Q8NAS9 161 aa9.13□□□□□ -0.95
TRAIP-209ENST00000488860 OR4B1Q8NGF8 309 aa9.13□□□□□ -0.95
TRAIP-209ENST00000488860 OR10J6PQ8NGY7 276 aa9.13□□□□□ -0.95
TRAIP-209ENST00000488860 LYPD6BQ8NI32 183 aa9.13□□□□□ -0.95
TRAIP-209ENST00000488860 RXFP4Q8TDU9 374 aa9.13□□□□□ -0.95
TRAIP-209ENST00000488860 CITED4Q96RK1 184 aa9.13□□□□□ -0.95
TRAIP-209ENST00000488860 SAV1Q9H4B6 383 aaPredicted RBP9.13□□□□□ -0.95
TRAIP-209ENST00000488860 TUBA4BQ9H853 241 aa9.13□□□□□ -0.95
TRAIP-209ENST00000488860 LOC102723971A0A1B0GUV8 181 aa9.12□□□□□ -0.95
TRAIP-209ENST00000488860 DIRC3C9JPN6 131 aa9.12□□□□□ -0.95
TRAIP-209ENST00000488860 PEX7O00628 323 aa9.12□□□□□ -0.95
TRAIP-209ENST00000488860 IGHV4-30-4P0DP06 118 aa9.12□□□□□ -0.95
TRAIP-209ENST00000488860 HLA-DRB4P13762 266 aa9.12□□□□□ -0.95
TRAIP-209ENST00000488860 RPL35AP18077 110 aaKnown RBP9.12□□□□□ -0.95
TRAIP-209ENST00000488860 CLLU1Q5K131 121 aa9.12□□□□□ -0.95
TRAIP-209ENST00000488860 OR8A1Q8NGG7 326 aa9.12□□□□□ -0.95
TRAIP-209ENST00000488860 NKX6-2Q9C056 277 aaPredicted RBP9.12□□□□□ -0.95
TRAIP-209ENST00000488860 VAX2Q9UIW0 290 aa9.12□□□□□ -0.95
TRAIP-209ENST00000488860 HLA-DRB4X5D2U9 266 aa9.12□□□□□ -0.95
TRAIP-209ENST00000488860 A0A0J9YX75 114 aa9.11□□□□□ -0.95
TRAIP-209ENST00000488860 SCO2A0A1W2PP80 73 aa9.11□□□□□ -0.95
TRAIP-209ENST00000488860 RBFOX3A6NFN3 312 aa9.11□□□□□ -0.95
TRAIP-209ENST00000488860 RGS13O14921 159 aa9.11□□□□□ -0.95
TRAIP-209ENST00000488860 TCRAP04437 139 aa9.11□□□□□ -0.95
TRAIP-209ENST00000488860 CNN1P51911 297 aaKnown RBP9.11□□□□□ -0.95
TRAIP-209ENST00000488860 MEF2BQ02080 365 aaPredicted RBP9.11□□□□□ -0.95
TRAIP-209ENST00000488860 ERCC8Q13216 396 aa9.11□□□□□ -0.95
TRAIP-209ENST00000488860 RARRES2Q99969 163 aa9.11□□□□□ -0.95
TRAIP-209ENST00000488860 ATG101Q9BSB4 218 aa9.11□□□□□ -0.95
TRAIP-209ENST00000488860 EIF5A2Q9GZV4 153 aaKnown RBP9.11□□□□□ -0.95
TRAIP-209ENST00000488860 PPP1R14DQ9NXH3 145 aa9.11□□□□□ -0.95
TRAIP-209ENST00000488860 EPDR1Q9UM22 224 aa9.11□□□□□ -0.95
TRAIP-209ENST00000488860 NOTCH1P46531 2555 aa9.11□□□□□ -0.95
TRAIP-209ENST00000488860 H3BMM0 161 aa9.1□□□□□ -0.95
TRAIP-209ENST00000488860 K7EIL1 84 aa9.1□□□□□ -0.95
TRAIP-209ENST00000488860 K7EQM0 130 aa9.1□□□□□ -0.95
TRAIP-209ENST00000488860 DUSP14O95147 198 aaKnown RBP9.1□□□□□ -0.95
TRAIP-209ENST00000488860 TAGLN2P37802 199 aaKnown RBP9.1□□□□□ -0.95
TRAIP-209ENST00000488860 AKR1C3P42330 323 aa9.1□□□□□ -0.95
TRAIP-209ENST00000488860 TMEM78Q5T7P6 136 aa9.1□□□□□ -0.95
TRAIP-209ENST00000488860 CYB561D1Q8N8Q1 229 aa9.1□□□□□ -0.95
TRAIP-209ENST00000488860 Q8TAT8 98 aa9.1□□□□□ -0.95
TRAIP-209ENST00000488860 SGK494Q96LW2 274 aa9.1□□□□□ -0.95
TRAIP-209ENST00000488860 FAM210AQ96ND0 272 aa9.1□□□□□ -0.95
TRAIP-209ENST00000488860 LOC102724200A0A096LPH7 203 aaPredicted RBP9.09□□□□□ -0.95
TRAIP-209ENST00000488860 TRAV8-1A0A0A6YYK1 113 aa9.09□□□□□ -0.95
TRAIP-209ENST00000488860 RBMY1BA6NDE4 496 aaKnown RBP9.09□□□□□ -0.95
TRAIP-209ENST00000488860 RBMY1EA6NEQ0 496 aaKnown RBP9.09□□□□□ -0.95
TRAIP-209ENST00000488860 NPIPB6E9PJ23 425 aa9.09□□□□□ -0.95
TRAIP-209ENST00000488860 F6UZH7 168 aa9.09□□□□□ -0.95
TRAIP-209ENST00000488860 RBMY1DP0C7P1 496 aaKnown RBP9.09□□□□□ -0.95
TRAIP-209ENST00000488860 FXYD7P58549 80 aa9.09□□□□□ -0.95
TRAIP-209ENST00000488860 DEFB121Q5J5C9 76 aa9.09□□□□□ -0.95
TRAIP-209ENST00000488860 ZNF506Q5JVG8 444 aa9.09□□□□□ -0.95
TRAIP-209ENST00000488860 TRPT1Q86TN4 253 aaKnown RBP9.09□□□□□ -0.95
TRAIP-209ENST00000488860 CCDC28AQ8IWP9 274 aa9.09□□□□□ -0.95
TRAIP-209ENST00000488860 MRAPQ8TCY5 172 aa9.09□□□□□ -0.95
TRAIP-209ENST00000488860 ASCL2Q99929 193 aa9.09□□□□□ -0.95
TRAIP-209ENST00000488860 VGLL1Q99990 258 aa9.09□□□□□ -0.95
TRAIP-209ENST00000488860 TCEAL7Q9BRU2 100 aa9.09□□□□□ -0.95
TRAIP-209ENST00000488860 NBEAL1Q6ZS30 2694 aa9.08□□□□□ -0.96
TRAIP-209ENST00000488860 TRAV34A0A0B4J273 112 aa9.08□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms