RNA–Protein interactions for RNA: ENST00000488536.1

UBA7-208, Transcript of ubiquitin like modifier activating enzyme 7, human

TSL 2

Gene UBA7, Length 654 nt, Biotype retained intron, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
UBA7-208	ENST00000488536	GRIFIN	A4D1Z8	144 aa		10.81	□□□□□ -0.68
UBA7-208	ENST00000488536		K7EMT4	169 aa		10.81	□□□□□ -0.68
UBA7-208	ENST00000488536	SERF1A	O75920	110 aa		10.81	□□□□□ -0.68
UBA7-208	ENST00000488536	IGHG4	P01861	327 aa		10.81	□□□□□ -0.68
UBA7-208	ENST00000488536	IGHV4-31	P0DP07	118 aa		10.81	□□□□□ -0.68
UBA7-208	ENST00000488536	GZMB	P10144	247 aa		10.81	□□□□□ -0.68
UBA7-208	ENST00000488536	RAB4A	P20338	218 aa		10.81	□□□□□ -0.68
UBA7-208	ENST00000488536	TCF24	Q7RTU0	167 aa		10.81	□□□□□ -0.68
UBA7-208	ENST00000488536	TMEM256	Q8N2U0	113 aa		10.81	□□□□□ -0.68
UBA7-208	ENST00000488536	KCNS1	Q96KK3	526 aa		10.81	□□□□□ -0.68
UBA7-208	ENST00000488536	NOL4L	Q96MY1	436 aa	Predicted RBP	10.81	□□□□□ -0.68
UBA7-208	ENST00000488536	ASCL2	Q99929	193 aa		10.81	□□□□□ -0.68
UBA7-208	ENST00000488536	TP53TG3	Q9ULZ0	132 aa		10.81	□□□□□ -0.68
UBA7-208	ENST00000488536		A1L4Q6	167 aa		10.8	□□□□□ -0.68
UBA7-208	ENST00000488536	TMEM189	A5PLL7	270 aa		10.8	□□□□□ -0.68
UBA7-208	ENST00000488536	PF4V1	P10720	104 aa		10.8	□□□□□ -0.68
UBA7-208	ENST00000488536	PKIA	P61925	76 aa		10.8	□□□□□ -0.68
UBA7-208	ENST00000488536	DEFB112	Q30KQ8	113 aa		10.8	□□□□□ -0.68
UBA7-208	ENST00000488536	SIGLECL1	Q8N7X8	197 aa		10.8	□□□□□ -0.68
UBA7-208	ENST00000488536	GLMP	Q8WWB7	406 aa		10.8	□□□□□ -0.68
UBA7-208	ENST00000488536	NRGN	Q92686	78 aa		10.8	□□□□□ -0.68
UBA7-208	ENST00000488536	PGLYRP4	Q96LB8	373 aa		10.8	□□□□□ -0.68
UBA7-208	ENST00000488536	ALKBH7	Q9BT30	221 aa	Predicted RBP	10.8	□□□□□ -0.68
UBA7-208	ENST00000488536	SAMD10	Q9BYL1	202 aa		10.8	□□□□□ -0.68
UBA7-208	ENST00000488536	NPFFR1	Q9GZQ6	430 aa		10.8	□□□□□ -0.68
UBA7-208	ENST00000488536	VPREB3	Q9UKI3	123 aa		10.8	□□□□□ -0.68
UBA7-208	ENST00000488536	UBR5	O95071	2799 aa	Predicted RBP	10.79	□□□□□ -0.68
UBA7-208	ENST00000488536	FABP5P3	A8MUU1	101 aa		10.79	□□□□□ -0.68
UBA7-208	ENST00000488536	TSTD3	H0UI37	97 aa		10.79	□□□□□ -0.68
UBA7-208	ENST00000488536	APOH	P02749	345 aa	Predicted RBP	10.79	□□□□□ -0.68
UBA7-208	ENST00000488536	FRMD6-AS1	P0C7T7	363 aa		10.79	□□□□□ -0.68
UBA7-208	ENST00000488536	BLCAP	P62952	87 aa		10.79	□□□□□ -0.68
UBA7-208	ENST00000488536	SLA	Q13239	276 aa		10.79	□□□□□ -0.68
UBA7-208	ENST00000488536	FOXE3	Q13461	319 aa		10.79	□□□□□ -0.68
UBA7-208	ENST00000488536		Q5PR19	223 aa		10.79	□□□□□ -0.68
UBA7-208	ENST00000488536		Q6YL49	198 aa		10.79	□□□□□ -0.68
UBA7-208	ENST00000488536	OR4X2	Q8NGF9	303 aa		10.79	□□□□□ -0.68
UBA7-208	ENST00000488536	RELN	P78509	3460 aa		10.79	□□□□□ -0.68
UBA7-208	ENST00000488536	IGKV2-40	A0A087WW87	121 aa	Predicted RBP	10.78	□□□□□ -0.68
UBA7-208	ENST00000488536	TRBV7-9	A0A0J9YWB2	115 aa		10.78	□□□□□ -0.68
UBA7-208	ENST00000488536	RNF223	E7ERA6	249 aa		10.78	□□□□□ -0.68
UBA7-208	ENST00000488536	SH2D1A	O60880	128 aa		10.78	□□□□□ -0.68
UBA7-208	ENST00000488536	IGKV2D-40	P01614	121 aa	Predicted RBP	10.78	□□□□□ -0.68
UBA7-208	ENST00000488536	GPX1	P07203	203 aa		10.78	□□□□□ -0.68
UBA7-208	ENST00000488536	PMCH	P20382	165 aa		10.78	□□□□□ -0.68
UBA7-208	ENST00000488536	CAMP	P49913	170 aa		10.78	□□□□□ -0.68
UBA7-208	ENST00000488536	CRIP1	P50238	77 aa		10.78	□□□□□ -0.68
UBA7-208	ENST00000488536	HIST1H1A	Q02539	215 aa	Predicted RBP	10.78	□□□□□ -0.68
UBA7-208	ENST00000488536	FAM106A	Q4KMX7	169 aa		10.78	□□□□□ -0.68
UBA7-208	ENST00000488536	TMEM78	Q5T7P6	136 aa		10.78	□□□□□ -0.68
UBA7-208	ENST00000488536	GDF5OS	Q5U4N7	250 aa		10.78	□□□□□ -0.68
UBA7-208	ENST00000488536	ZNF493	Q6ZR52	646 aa		10.78	□□□□□ -0.68
UBA7-208	ENST00000488536	C9orf47	Q6ZRZ4	202 aa		10.78	□□□□□ -0.68
UBA7-208	ENST00000488536	C8orf86	Q6ZUL3	223 aa		10.78	□□□□□ -0.68
UBA7-208	ENST00000488536	GPHB5	Q86YW7	130 aa		10.78	□□□□□ -0.68
UBA7-208	ENST00000488536	C18orf32	Q8TCD1	76 aa		10.78	□□□□□ -0.68
UBA7-208	ENST00000488536	CHCHD1	Q96BP2	118 aa	Known RBP	10.78	□□□□□ -0.68
UBA7-208	ENST00000488536	PEF1	Q9UBV8	284 aa	Known RBP	10.78	□□□□□ -0.68
UBA7-208	ENST00000488536	MYO18B	Q8IUG5	2567 aa		10.77	□□□□□ -0.68
UBA7-208	ENST00000488536	IGHV3-35	A0A0C4DH35	117 aa		10.77	□□□□□ -0.69
UBA7-208	ENST00000488536	OVOL1	O14753	267 aa		10.77	□□□□□ -0.69
UBA7-208	ENST00000488536	ZNF324	O75467	553 aa	Predicted RBP	10.77	□□□□□ -0.69
UBA7-208	ENST00000488536	ELANE	P08246	267 aa		10.77	□□□□□ -0.69
UBA7-208	ENST00000488536	PSMB8	P28062	276 aa		10.77	□□□□□ -0.69
UBA7-208	ENST00000488536	ZNF138	P52744	262 aa		10.77	□□□□□ -0.69
UBA7-208	ENST00000488536	LINC00310	P59036	64 aa		10.77	□□□□□ -0.69
UBA7-208	ENST00000488536	TMEM86B	Q8N661	226 aa		10.77	□□□□□ -0.69
UBA7-208	ENST00000488536	UFC1	Q9Y3C8	167 aa		10.77	□□□□□ -0.69
UBA7-208	ENST00000488536	MED13L	Q71F56	2210 aa		10.77	□□□□□ -0.69
UBA7-208	ENST00000488536	ZNF462	Q96JM2	2506 aa		10.77	□□□□□ -0.69
UBA7-208	ENST00000488536	AKAP6	Q13023	2319 aa		10.76	□□□□□ -0.69
UBA7-208	ENST00000488536	SPTAN1	Q13813	2472 aa	Known RBP	10.76	□□□□□ -0.69
UBA7-208	ENST00000488536	LOC102724200	A0A096LPH7	203 aa	Predicted RBP	10.76	□□□□□ -0.69
UBA7-208	ENST00000488536		F2Z2F3	143 aa		10.76	□□□□□ -0.69
UBA7-208	ENST00000488536	IGHV4-59	P01825	116 aa		10.76	□□□□□ -0.69
UBA7-208	ENST00000488536	CTRL	P40313	264 aa		10.76	□□□□□ -0.69
UBA7-208	ENST00000488536	KIAA1644	Q3SXP7	199 aa		10.76	□□□□□ -0.69
UBA7-208	ENST00000488536	LINC01559	Q495D7	138 aa		10.76	□□□□□ -0.69
UBA7-208	ENST00000488536	C16orf92	Q96LL3	132 aa		10.76	□□□□□ -0.69
UBA7-208	ENST00000488536	LINC00477	Q96M19	166 aa		10.76	□□□□□ -0.69
UBA7-208	ENST00000488536	C8orf49	Q96NF6	230 aa		10.76	□□□□□ -0.69
UBA7-208	ENST00000488536	DAZ1	Q9NQZ3	744 aa	Known RBP	10.76	□□□□□ -0.69
UBA7-208	ENST00000488536	NAGK	Q9UJ70	344 aa		10.76	□□□□□ -0.69
UBA7-208	ENST00000488536	LINC00527	Q9UJ94	153 aa		10.76	□□□□□ -0.69
UBA7-208	ENST00000488536	FLNC	Q14315	2725 aa		10.76	□□□□□ -0.69
UBA7-208	ENST00000488536	PRPF8	Q6P2Q9	2335 aa	Known RBP eCLIP	10.75	□□□□□ -0.69	5e-6	■■■■□ 22.8
UBA7-208	ENST00000488536	TRAV8-2	A0A0B4J237	113 aa		10.75	□□□□□ -0.69
UBA7-208	ENST00000488536	IGHV7-4-1	A0A0J9YVY3	117 aa		10.75	□□□□□ -0.69
UBA7-208	ENST00000488536	NUPR1	O60356	82 aa		10.75	□□□□□ -0.69
UBA7-208	ENST00000488536	AMT	P48728	403 aa		10.75	□□□□□ -0.69
UBA7-208	ENST00000488536	VGLL1	Q99990	258 aa		10.75	□□□□□ -0.69
UBA7-208	ENST00000488536	CNFN	Q9BYD5	112 aa		10.75	□□□□□ -0.69
UBA7-208	ENST00000488536	HSBP1	O75506	76 aa		10.74	□□□□□ -0.69
UBA7-208	ENST00000488536	SCGB1D1	O95968	90 aa		10.74	□□□□□ -0.69
UBA7-208	ENST00000488536	RNF152	Q8N8N0	203 aa		10.74	□□□□□ -0.69
UBA7-208	ENST00000488536	KLK15	Q9H2R5	256 aa		10.74	□□□□□ -0.69
UBA7-208	ENST00000488536	NRN1	Q9NPD7	142 aa		10.74	□□□□□ -0.69
UBA7-208	ENST00000488536	TACC2	O95359	2948 aa		10.73	□□□□□ -0.69
UBA7-208	ENST00000488536	IGHV3OR16-8	A0A075B7F1	116 aa		10.73	□□□□□ -0.69
UBA7-208	ENST00000488536		A0A1B0GUS0	222 aa		10.73	□□□□□ -0.69

Retrieved 100 of 20,778 RNA–protein pairs in 43.7 ms