RNA–Protein interactions for RNA: ENST00000487890.5

GPNMB-212, Transcript of glycoprotein nmb, humanhuman

TSL 5

Gene GPNMB, Length 577 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPNMB-212ENST00000487890 TMEM183AQ8IXX5 376 aa2.29□□□□□ -2.04
GPNMB-212ENST00000487890 C8orf59Q8N0T1 100 aaPredicted RBP2.29□□□□□ -2.04
GPNMB-212ENST00000487890 BPIFB6Q8NFQ5 453 aa2.29□□□□□ -2.04
GPNMB-212ENST00000487890 OR1L8Q8NGR8 309 aa2.29□□□□□ -2.04
GPNMB-212ENST00000487890 OR4K15Q8NH41 348 aa2.29□□□□□ -2.04
GPNMB-212ENST00000487890 OR1L1Q8NH94 360 aa2.29□□□□□ -2.04
GPNMB-212ENST00000487890 OR13C6PQ8NH95 151 aa2.29□□□□□ -2.04
GPNMB-212ENST00000487890 TMEM203Q969S6 136 aa2.29□□□□□ -2.04
GPNMB-212ENST00000487890 MRAP2Q96G30 205 aa2.29□□□□□ -2.04
GPNMB-212ENST00000487890 RDH12Q96NR8 316 aa2.29□□□□□ -2.04
GPNMB-212ENST00000487890 CMSS1Q9BQ75 279 aaKnown RBP2.29□□□□□ -2.04
GPNMB-212ENST00000487890 C20orf144Q9BQM9 153 aa2.29□□□□□ -2.04
GPNMB-212ENST00000487890 KRTAP9-8Q9BYQ0 159 aa2.29□□□□□ -2.04
GPNMB-212ENST00000487890 SLIRPQ9GZT3 109 aaKnown RBP2.29□□□□□ -2.04
GPNMB-212ENST00000487890 PRO0628Q9UI54 55 aa2.29□□□□□ -2.04
GPNMB-212ENST00000487890 PKIGQ9Y2B9 76 aa2.29□□□□□ -2.04
GPNMB-212ENST00000487890 KLF12Q9Y4X4 402 aa2.29□□□□□ -2.04
GPNMB-212ENST00000487890 RFNGQ9Y644 331 aa2.29□□□□□ -2.04
GPNMB-212ENST00000487890 IGHV1-3A0A0C4DH29 117 aa2.28□□□□□ -2.04
GPNMB-212ENST00000487890 WI2-2373I1.2A0A1W2PRP0 233 aa2.28□□□□□ -2.04
GPNMB-212ENST00000487890 LY6LH3BQJ8 138 aa2.28□□□□□ -2.04
GPNMB-212ENST00000487890 TAAR5O14804 337 aa2.28□□□□□ -2.04
GPNMB-212ENST00000487890 HMGB3O15347 200 aaKnown RBP2.28□□□□□ -2.04
GPNMB-212ENST00000487890 PDCD6O75340 191 aa2.28□□□□□ -2.04
GPNMB-212ENST00000487890 SLC22A5O76082 557 aa2.28□□□□□ -2.04
GPNMB-212ENST00000487890 METTL15P1P0C7V9 234 aa2.28□□□□□ -2.04
GPNMB-212ENST00000487890 RCC1P18754 421 aaPredicted RBP2.28□□□□□ -2.04
GPNMB-212ENST00000487890 PPP1CCP36873 323 aaKnown RBP2.28□□□□□ -2.04
GPNMB-212ENST00000487890 NMUP48645 174 aa2.28□□□□□ -2.04
GPNMB-212ENST00000487890 WNT4P56705 351 aa2.28□□□□□ -2.04
GPNMB-212ENST00000487890 TCTAP57738 103 aa2.28□□□□□ -2.04
GPNMB-212ENST00000487890 ZNF816Q0VGE8 651 aaPredicted RBP2.28□□□□□ -2.04
GPNMB-212ENST00000487890 CDK10Q15131 360 aa2.28□□□□□ -2.04
GPNMB-212ENST00000487890 MMDQ15546 238 aa2.28□□□□□ -2.04
GPNMB-212ENST00000487890 KPRPQ5T749 579 aaPredicted RBP2.28□□□□□ -2.04
GPNMB-212ENST00000487890 FAM231DQ6ZW35 169 aa2.28□□□□□ -2.04
GPNMB-212ENST00000487890 ZNF695Q8IW36 515 aa2.28□□□□□ -2.04
GPNMB-212ENST00000487890 C5orf56Q8N8D9 126 aa2.28□□□□□ -2.04
GPNMB-212ENST00000487890 GATD1Q8NB37 220 aa2.28□□□□□ -2.04
GPNMB-212ENST00000487890 OR2T10Q8NGZ9 312 aa2.28□□□□□ -2.04
GPNMB-212ENST00000487890 SFT2D1Q8WV19 159 aa2.28□□□□□ -2.04
GPNMB-212ENST00000487890 RTN4IP1Q8WWV3 396 aaPredicted RBP2.28□□□□□ -2.04
GPNMB-212ENST00000487890 PTX4Q96A99 478 aa2.28□□□□□ -2.04
GPNMB-212ENST00000487890 GALMQ96C23 342 aa2.28□□□□□ -2.04
GPNMB-212ENST00000487890 RBMXL1Q96E39 390 aaKnown RBP2.28□□□□□ -2.04
GPNMB-212ENST00000487890 GALNT14Q96FL9 552 aa2.28□□□□□ -2.04
GPNMB-212ENST00000487890 PGLYRP3Q96LB9 341 aa2.28□□□□□ -2.04
GPNMB-212ENST00000487890 DERL3Q96Q80 235 aa2.28□□□□□ -2.04
GPNMB-212ENST00000487890 MARVELD1Q9BSK0 173 aa2.28□□□□□ -2.04
GPNMB-212ENST00000487890 SLC25A2Q9BXI2 301 aa2.28□□□□□ -2.04
GPNMB-212ENST00000487890 MRPL20Q9BYC9 149 aaKnown RBP2.28□□□□□ -2.04
GPNMB-212ENST00000487890 CST11Q9H112 138 aa2.28□□□□□ -2.04
GPNMB-212ENST00000487890 DCSTAMPQ9H295 470 aa2.28□□□□□ -2.04
GPNMB-212ENST00000487890 FBXL15Q9H469 300 aa2.28□□□□□ -2.04
GPNMB-212ENST00000487890 TAF9BQ9HBM6 251 aa2.28□□□□□ -2.04
GPNMB-212ENST00000487890 PARP11Q9NR21 331 aa2.28□□□□□ -2.04
GPNMB-212ENST00000487890 SPANXB1Q9NS25 103 aaPredicted RBP2.28□□□□□ -2.04
GPNMB-212ENST00000487890 ABRACLQ9P1F3 81 aa2.28□□□□□ -2.04
GPNMB-212ENST00000487890 COPZ2Q9P299 210 aa2.28□□□□□ -2.04
GPNMB-212ENST00000487890 CARHSP1Q9Y2V2 147 aaKnown RBP2.28□□□□□ -2.04
GPNMB-212ENST00000487890 OR51B2Q9Y5P1 312 aa2.28□□□□□ -2.04
GPNMB-212ENST00000487890 WSB1Q9Y6I7 421 aa2.28□□□□□ -2.04
GPNMB-212ENST00000487890 LYSTQ99698 3801 aa2.27□□□□□ -2.05
GPNMB-212ENST00000487890 SMIM26A0A096LP01 95 aa2.27□□□□□ -2.05
GPNMB-212ENST00000487890 A0A0J9YXV3 536 aa2.27□□□□□ -2.05
GPNMB-212ENST00000487890 A0A1W2PRE2 83 aa2.27□□□□□ -2.05
GPNMB-212ENST00000487890 MAP1LC3B2A6NCE7 125 aa2.27□□□□□ -2.05
GPNMB-212ENST00000487890 OR4C46A6NHA9 309 aa2.27□□□□□ -2.05
GPNMB-212ENST00000487890 ZNF736B4DX44 427 aaPredicted RBP2.27□□□□□ -2.05
GPNMB-212ENST00000487890 K7EIL1 84 aa2.27□□□□□ -2.05
GPNMB-212ENST00000487890 SLC17A3O00476 420 aa2.27□□□□□ -2.05
GPNMB-212ENST00000487890 CRXO43186 299 aaPredicted RBP2.27□□□□□ -2.05
GPNMB-212ENST00000487890 ORC5O43913 435 aa2.27□□□□□ -2.05
GPNMB-212ENST00000487890 GNG7O60262 68 aa2.27□□□□□ -2.05
GPNMB-212ENST00000487890 IGHG2P01859 326 aa2.27□□□□□ -2.05
GPNMB-212ENST00000487890 CRYGDP07320 174 aa2.27□□□□□ -2.05
GPNMB-212ENST00000487890 UBBP0CG47 229 aa2.27□□□□□ -2.05
GPNMB-212ENST00000487890 CGB3P0DN86 165 aa2.27□□□□□ -2.05
GPNMB-212ENST00000487890 CGB7P0DN87 165 aa2.27□□□□□ -2.05
GPNMB-212ENST00000487890 BLVRBP30043 206 aaPredicted RBP2.27□□□□□ -2.05
GPNMB-212ENST00000487890 DDTP30046 118 aa2.27□□□□□ -2.05
GPNMB-212ENST00000487890 HERVK_113P61574 105 aa2.27□□□□□ -2.05
GPNMB-212ENST00000487890 RPS11P62280 158 aaKnown RBP eCLIP2.27□□□□□ -2.05
GPNMB-212ENST00000487890 INSL4Q14641 139 aa2.27□□□□□ -2.05
GPNMB-212ENST00000487890 PRSS8Q16651 343 aa2.27□□□□□ -2.05
GPNMB-212ENST00000487890 HSD17B12Q53GQ0 312 aa2.27□□□□□ -2.05
GPNMB-212ENST00000487890 TMEM78Q5T7P6 136 aa2.27□□□□□ -2.05
GPNMB-212ENST00000487890 GLT8D1Q68CQ7 371 aa2.27□□□□□ -2.05
GPNMB-212ENST00000487890 C6orf201Q7Z4U5 140 aa2.27□□□□□ -2.05
GPNMB-212ENST00000487890 FAM71E2Q8N5Q1 922 aa2.27□□□□□ -2.05
GPNMB-212ENST00000487890 LINC00311Q8N616 119 aa2.27□□□□□ -2.05
GPNMB-212ENST00000487890 PACRGLQ8N7B6 248 aa2.27□□□□□ -2.05
GPNMB-212ENST00000487890 Q8N9W7 124 aa2.27□□□□□ -2.05
GPNMB-212ENST00000487890 OR11H7Q8NGC8 314 aa2.27□□□□□ -2.05
GPNMB-212ENST00000487890 OR10G4Q8NGN3 311 aa2.27□□□□□ -2.05
GPNMB-212ENST00000487890 OR4X1Q8NH49 305 aa2.27□□□□□ -2.05
GPNMB-212ENST00000487890 ASB13Q8WXK3 278 aa2.27□□□□□ -2.05
GPNMB-212ENST00000487890 MRPS24Q96EL2 167 aaKnown RBP2.27□□□□□ -2.05
GPNMB-212ENST00000487890 DIRAS2Q96HU8 199 aa2.27□□□□□ -2.05
GPNMB-212ENST00000487890 NARS2Q96I59 477 aaKnown RBP2.27□□□□□ -2.05
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms