RNA–Protein interactions for RNA: ENST00000487698.5

SF3B1-211, Transcript of splicing factor 3b subunit 1, humanhuman

TSL 1 (best) BASIC

Gene SF3B1, Length 2,127 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B1-211ENST00000487698 OSTCQ9NRP0 149 aa7.18□□□□□ -1.26
SF3B1-211ENST00000487698 SMPXQ9UHP9 88 aa7.18□□□□□ -1.26
SF3B1-211ENST00000487698 UFC1Q9Y3C8 167 aa7.18□□□□□ -1.26
SF3B1-211ENST00000487698 V9GYV3 84 aa7.18□□□□□ -1.26
SF3B1-211ENST00000487698 TMEM213A2RRL7 107 aa7.18□□□□□ -1.26
SF3B1-211ENST00000487698 K7EQM0 130 aa7.18□□□□□ -1.26
SF3B1-211ENST00000487698 CHEK1O14757 476 aa7.18□□□□□ -1.26
SF3B1-211ENST00000487698 CRYBA1P05813 215 aa7.18□□□□□ -1.26
SF3B1-211ENST00000487698 MGST1P10620 155 aaKnown RBP7.18□□□□□ -1.26
SF3B1-211ENST00000487698 HOXD3P31249 432 aaPredicted RBP7.18□□□□□ -1.26
SF3B1-211ENST00000487698 CSN1S1P47710 185 aa7.18□□□□□ -1.26
SF3B1-211ENST00000487698 ERVFC1-1P60608 527 aa7.18□□□□□ -1.26
SF3B1-211ENST00000487698 FLI1Q01543 452 aaPredicted RBP7.18□□□□□ -1.26
SF3B1-211ENST00000487698 IGFL4Q6B9Z1 124 aa7.18□□□□□ -1.26
SF3B1-211ENST00000487698 FAM231DQ6ZW35 169 aa7.18□□□□□ -1.26
SF3B1-211ENST00000487698 Q71RC1 249 aaPredicted RBP7.18□□□□□ -1.26
SF3B1-211ENST00000487698 RHPN1-AS1Q9BWJ2 59 aa7.18□□□□□ -1.26
SF3B1-211ENST00000487698 RNASE7Q9H1E1 156 aaKnown RBP7.18□□□□□ -1.26
SF3B1-211ENST00000487698 INAFM1C9JVW0 142 aa7.17□□□□□ -1.26
SF3B1-211ENST00000487698 SOCS3O14543 225 aa7.17□□□□□ -1.26
SF3B1-211ENST00000487698 NDUFA7O95182 113 aa7.17□□□□□ -1.26
SF3B1-211ENST00000487698 EDN2P20800 178 aa7.17□□□□□ -1.26
SF3B1-211ENST00000487698 FOXL1Q12952 345 aa7.17□□□□□ -1.26
SF3B1-211ENST00000487698 IBA57Q5T440 356 aaKnown RBP7.17□□□□□ -1.26
SF3B1-211ENST00000487698 TMEM183AQ8IXX5 376 aa7.17□□□□□ -1.26
SF3B1-211ENST00000487698 LINC01006Q8NI28 216 aa7.17□□□□□ -1.26
SF3B1-211ENST00000487698 WFDC12Q8WWY7 111 aa7.17□□□□□ -1.26
SF3B1-211ENST00000487698 MRPL53Q96EL3 112 aaKnown RBP7.17□□□□□ -1.26
SF3B1-211ENST00000487698 JMJD8Q96S16 334 aa7.17□□□□□ -1.26
SF3B1-211ENST00000487698 BAHCC1Q9P281 2608 aa7.17□□□□□ -1.26
SF3B1-211ENST00000487698 PRB4P10163 310 aaPredicted RBP7.16□□□□□ -1.26
SF3B1-211ENST00000487698 S100PP25815 95 aa7.16□□□□□ -1.26
SF3B1-211ENST00000487698 KLF5Q13887 457 aaPredicted RBP7.16□□□□□ -1.26
SF3B1-211ENST00000487698 LCN12Q6JVE5 192 aa7.16□□□□□ -1.26
SF3B1-211ENST00000487698 PRNTQ86SH4 94 aa7.16□□□□□ -1.26
SF3B1-211ENST00000487698 C1QL4Q86Z23 238 aa7.16□□□□□ -1.26
SF3B1-211ENST00000487698 RNF182Q8N6D2 247 aa7.16□□□□□ -1.26
SF3B1-211ENST00000487698 PSG8Q9UQ74 426 aa7.16□□□□□ -1.26
SF3B1-211ENST00000487698 ZFP30Q9Y2G7 519 aa7.16□□□□□ -1.26
SF3B1-211ENST00000487698 IGKV2-40A0A087WW87 121 aaPredicted RBP7.16□□□□□ -1.26
SF3B1-211ENST00000487698 FBLL1A6NHQ2 334 aaKnown RBP7.16□□□□□ -1.26
SF3B1-211ENST00000487698 ZNF705FA8MVS1 300 aaPredicted RBP7.16□□□□□ -1.26
SF3B1-211ENST00000487698 IGKV2D-40P01614 121 aaPredicted RBP7.16□□□□□ -1.26
SF3B1-211ENST00000487698 SYNJ2BPP57105 145 aa7.16□□□□□ -1.26
SF3B1-211ENST00000487698 DEFB136Q30KP8 78 aa7.16□□□□□ -1.26
SF3B1-211ENST00000487698 KCNIP4Q6PIL6 250 aa7.16□□□□□ -1.26
SF3B1-211ENST00000487698 FAM210BQ96KR6 192 aa7.16□□□□□ -1.26
SF3B1-211ENST00000487698 NRN1Q9NPD7 142 aa7.16□□□□□ -1.26
SF3B1-211ENST00000487698 CLEC5AQ9NY25 188 aa7.16□□□□□ -1.26
SF3B1-211ENST00000487698 IL36BQ9NZH7 164 aa7.16□□□□□ -1.26
SF3B1-211ENST00000487698 ZNF492Q9P255 531 aa7.16□□□□□ -1.26
SF3B1-211ENST00000487698 MLXQ9UH92 298 aa7.16□□□□□ -1.26
SF3B1-211ENST00000487698 F8P00451 2351 aa7.16□□□□□ -1.26
SF3B1-211ENST00000487698 RBAKDNA6NC62 111 aa7.15□□□□□ -1.26
SF3B1-211ENST00000487698 C19orf71A6NCJ1 209 aa7.15□□□□□ -1.26
SF3B1-211ENST00000487698 PRAC2D3DTV9 90 aa7.15□□□□□ -1.26
SF3B1-211ENST00000487698 LINC00322Q6ZN03 302 aaPredicted RBP7.15□□□□□ -1.26
SF3B1-211ENST00000487698 NUDT10Q8NFP7 164 aa7.15□□□□□ -1.26
SF3B1-211ENST00000487698 NUDT11Q96G61 164 aa7.15□□□□□ -1.26
SF3B1-211ENST00000487698 BIN3Q9NQY0 253 aa7.15□□□□□ -1.26
SF3B1-211ENST00000487698 C2CD3Q4AC94 2353 aa7.15□□□□□ -1.27
SF3B1-211ENST00000487698 TRAV9-1A0A075B6T8 112 aa7.15□□□□□ -1.27
SF3B1-211ENST00000487698 A0A1W2PPQ1 181 aa7.15□□□□□ -1.27
SF3B1-211ENST00000487698 LINC01619G3V211 115 aa7.15□□□□□ -1.27
SF3B1-211ENST00000487698 TYMSP04818 313 aa7.15□□□□□ -1.27
SF3B1-211ENST00000487698 FAM3BP58499 235 aaPredicted RBP7.15□□□□□ -1.27
SF3B1-211ENST00000487698 PRR27Q6MZM9 219 aa7.15□□□□□ -1.27
SF3B1-211ENST00000487698 COX8CQ7Z4L0 72 aa7.15□□□□□ -1.27
SF3B1-211ENST00000487698 KLHL30-AS1Q8NEE0 82 aa7.15□□□□□ -1.27
SF3B1-211ENST00000487698 ZC2HC1AQ96GY0 325 aa7.15□□□□□ -1.27
SF3B1-211ENST00000487698 VGLL1Q99990 258 aa7.15□□□□□ -1.27
SF3B1-211ENST00000487698 C2orf70A6NJV1 201 aa7.14□□□□□ -1.27
SF3B1-211ENST00000487698 NPIPB6E9PJ23 425 aa7.14□□□□□ -1.27
SF3B1-211ENST00000487698 CD28P10747 220 aa7.14□□□□□ -1.27
SF3B1-211ENST00000487698 BMI1P35226 326 aa7.14□□□□□ -1.27
SF3B1-211ENST00000487698 RPS10P46783 165 aaKnown RBP7.14□□□□□ -1.27
SF3B1-211ENST00000487698 SLURP1P55000 103 aa7.14□□□□□ -1.27
SF3B1-211ENST00000487698 KHDC1LQ5JSQ8 128 aa7.14□□□□□ -1.27
SF3B1-211ENST00000487698 OR11H1Q8NG94 326 aa7.14□□□□□ -1.27
SF3B1-211ENST00000487698 OR1N2Q8NGR9 330 aa7.14□□□□□ -1.27
SF3B1-211ENST00000487698 C16orf92Q96LL3 132 aa7.14□□□□□ -1.27
SF3B1-211ENST00000487698 C20orf173Q96LM9 149 aa7.14□□□□□ -1.27
SF3B1-211ENST00000487698 SMIM27A0A1W2PRY6 76 aa7.13□□□□□ -1.27
SF3B1-211ENST00000487698 ZNF705GA8MUZ8 300 aaPredicted RBP7.13□□□□□ -1.27
SF3B1-211ENST00000487698 FHL3Q13643 280 aa7.13□□□□□ -1.27
SF3B1-211ENST00000487698 HIST2H2BDQ6DRA6 164 aa7.13□□□□□ -1.27
SF3B1-211ENST00000487698 TCF24Q7RTU0 167 aa7.13□□□□□ -1.27
SF3B1-211ENST00000487698 PRR25Q96S07 402 aa7.13□□□□□ -1.27
SF3B1-211ENST00000487698 ASCL2Q99929 193 aa7.13□□□□□ -1.27
SF3B1-211ENST00000487698 C1orf196B1AJZ1 125 aa7.13□□□□□ -1.27
SF3B1-211ENST00000487698 GATCO43716 136 aaKnown RBP7.13□□□□□ -1.27
SF3B1-211ENST00000487698 CBLN1P23435 193 aa7.13□□□□□ -1.27
SF3B1-211ENST00000487698 PROK1P58294 105 aa7.13□□□□□ -1.27
SF3B1-211ENST00000487698 CT83Q5H943 113 aa7.13□□□□□ -1.27
SF3B1-211ENST00000487698 ADAMTSL5Q6ZMM2 481 aa7.13□□□□□ -1.27
SF3B1-211ENST00000487698 GBGT1Q8N5D6 347 aa7.13□□□□□ -1.27
SF3B1-211ENST00000487698 Q8TAT8 98 aa7.13□□□□□ -1.27
SF3B1-211ENST00000487698 DCANP1Q8TF63 244 aa7.13□□□□□ -1.27
SF3B1-211ENST00000487698 BTF3L4Q96K17 158 aa7.13□□□□□ -1.27
SF3B1-211ENST00000487698 C8orf49Q96NF6 230 aa7.13□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms