RNA–Protein interactions for RNA: ENST00000487384.5

HOXA9-204, Transcript of homeobox A9, humanhuman

TSL 3

Gene HOXA9, Length 693 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA9-204ENST00000487384 SYNGR2O43760 224 aa5.67□□□□□ -1.5
HOXA9-204ENST00000487384 MED6O75586 246 aa5.67□□□□□ -1.5
HOXA9-204ENST00000487384 CT45A10P0DMU9 189 aa5.67□□□□□ -1.5
HOXA9-204ENST00000487384 ANXA3P12429 323 aa5.67□□□□□ -1.5
HOXA9-204ENST00000487384 RPP30P78346 268 aaKnown RBP5.67□□□□□ -1.5
HOXA9-204ENST00000487384 DAZ2Q13117 558 aaKnown RBP5.67□□□□□ -1.5
HOXA9-204ENST00000487384 PATE2Q6UY27 113 aa5.67□□□□□ -1.5
HOXA9-204ENST00000487384 SMIM4Q8WVI0 70 aa5.67□□□□□ -1.5
HOXA9-204ENST00000487384 NAA50Q9GZZ1 169 aaKnown RBP5.67□□□□□ -1.5
HOXA9-204ENST00000487384 ARL6Q9H0F7 186 aa5.67□□□□□ -1.5
HOXA9-204ENST00000487384 ZNF331Q9NQX6 463 aaPredicted RBP5.67□□□□□ -1.5
HOXA9-204ENST00000487384 MSRB1Q9NZV6 116 aa5.67□□□□□ -1.5
HOXA9-204ENST00000487384 FAM30AQ9NZY2 134 aa5.67□□□□□ -1.5
HOXA9-204ENST00000487384 SCP2D1Q9UJQ7 156 aa5.67□□□□□ -1.5
HOXA9-204ENST00000487384 LY96Q9Y6Y9 160 aa5.67□□□□□ -1.5
HOXA9-204ENST00000487384 HMCN2Q8NDA2 5059 aa5.67□□□□□ -1.5
HOXA9-204ENST00000487384 TRAV9-2A0A087WT02 112 aa5.66□□□□□ -1.5
HOXA9-204ENST00000487384 NPIPB6E9PJ23 425 aa5.66□□□□□ -1.5
HOXA9-204ENST00000487384 SLC17A3O00476 420 aa5.66□□□□□ -1.5
HOXA9-204ENST00000487384 CTDSP2O14595 271 aa5.66□□□□□ -1.5
HOXA9-204ENST00000487384 MRPS12O15235 138 aaKnown RBP5.66□□□□□ -1.5
HOXA9-204ENST00000487384 PRAF2O60831 178 aa5.66□□□□□ -1.5
HOXA9-204ENST00000487384 ZNF324O75467 553 aaPredicted RBP5.66□□□□□ -1.5
HOXA9-204ENST00000487384 RRAS2P62070 204 aaPredicted RBP5.66□□□□□ -1.5
HOXA9-204ENST00000487384 SRPXP78539 464 aa5.66□□□□□ -1.5
HOXA9-204ENST00000487384 IL18Q14116 193 aa5.66□□□□□ -1.5
HOXA9-204ENST00000487384 LYPD5Q6UWN5 251 aa5.66□□□□□ -1.5
HOXA9-204ENST00000487384 LCN15Q6UWW0 184 aa5.66□□□□□ -1.5
HOXA9-204ENST00000487384 WFDC10BQ8IUB3 73 aa5.66□□□□□ -1.5
HOXA9-204ENST00000487384 ZNF431Q8TF32 576 aaPredicted RBP5.66□□□□□ -1.5
HOXA9-204ENST00000487384 C8orf49Q96NF6 230 aa5.66□□□□□ -1.5
HOXA9-204ENST00000487384 SCGB3A2Q96PL1 93 aa5.66□□□□□ -1.5
HOXA9-204ENST00000487384 CIB3Q96Q77 187 aaPredicted RBP5.66□□□□□ -1.5
HOXA9-204ENST00000487384 PYGO2Q9BRQ0 406 aa5.66□□□□□ -1.5
HOXA9-204ENST00000487384 ARV1Q9H2C2 271 aa5.66□□□□□ -1.5
HOXA9-204ENST00000487384 STRAPQ9Y3F4 350 aaKnown RBP5.66□□□□□ -1.5
HOXA9-204ENST00000487384 KLF12Q9Y4X4 402 aa5.66□□□□□ -1.5
HOXA9-204ENST00000487384 FAT3Q8TDW7 4589 aa5.66□□□□□ -1.5
HOXA9-204ENST00000487384 ANKRD20A5PA0PJZ0 165 aa5.65□□□□□ -1.5
HOXA9-204ENST00000487384 KRTAP29-1A8MX34 341 aaPredicted RBP5.65□□□□□ -1.5
HOXA9-204ENST00000487384 E5RGE8 158 aa5.65□□□□□ -1.5
HOXA9-204ENST00000487384 CCNKO75909 580 aa5.65□□□□□ -1.5
HOXA9-204ENST00000487384 HOXB5P09067 269 aa5.65□□□□□ -1.5
HOXA9-204ENST00000487384 LEPP41159 167 aa5.65□□□□□ -1.5
HOXA9-204ENST00000487384 PLP1P60201 277 aa5.65□□□□□ -1.5
HOXA9-204ENST00000487384 MRPS10P82664 201 aaKnown RBP5.65□□□□□ -1.5
HOXA9-204ENST00000487384 SLC38A11Q08AI6 406 aa5.65□□□□□ -1.5
HOXA9-204ENST00000487384 ZBTB8BQ8NAP8 495 aaPredicted RBP5.65□□□□□ -1.5
HOXA9-204ENST00000487384 C11orf72Q8NBR9 251 aa5.65□□□□□ -1.5
HOXA9-204ENST00000487384 LINC00467Q9BRT7 94 aa5.65□□□□□ -1.5
HOXA9-204ENST00000487384 SLC50A1Q9BRV3 221 aa5.65□□□□□ -1.5
HOXA9-204ENST00000487384 TMEM70Q9BUB7 260 aa5.65□□□□□ -1.5
HOXA9-204ENST00000487384 DUXBA0A1W2PPF3 345 aa5.64□□□□□ -1.51
HOXA9-204ENST00000487384 PSCAO43653 123 aa5.64□□□□□ -1.51
HOXA9-204ENST00000487384 CRYGDP07320 174 aa5.64□□□□□ -1.51
HOXA9-204ENST00000487384 CXCL2P19875 107 aa5.64□□□□□ -1.51
HOXA9-204ENST00000487384 EVI2AP22794 236 aa5.64□□□□□ -1.51
HOXA9-204ENST00000487384 CRYBA4P53673 196 aa5.64□□□□□ -1.51
HOXA9-204ENST00000487384 SELENOTP62341 195 aa5.64□□□□□ -1.51
HOXA9-204ENST00000487384 BTN1A1Q13410 526 aa5.64□□□□□ -1.51
HOXA9-204ENST00000487384 MRPL23Q16540 153 aaKnown RBP5.64□□□□□ -1.51
HOXA9-204ENST00000487384 CTF1Q16619 201 aa5.64□□□□□ -1.51
HOXA9-204ENST00000487384 SERTAD4-AS1Q5TG53 156 aa5.64□□□□□ -1.51
HOXA9-204ENST00000487384 MORN5Q5VZ52 161 aa5.64□□□□□ -1.51
HOXA9-204ENST00000487384 TEPPQ6URK8 271 aa5.64□□□□□ -1.51
HOXA9-204ENST00000487384 NEGR1Q7Z3B1 354 aa5.64□□□□□ -1.51
HOXA9-204ENST00000487384 LINC00305Q7Z4B0 112 aa5.64□□□□□ -1.51
HOXA9-204ENST00000487384 SYT8Q8NBV8 401 aa5.64□□□□□ -1.51
HOXA9-204ENST00000487384 ZNF680Q8NEM1 530 aa5.64□□□□□ -1.51
HOXA9-204ENST00000487384 DIRAS2Q96HU8 199 aa5.64□□□□□ -1.51
HOXA9-204ENST00000487384 ST6GAL2Q96JF0 529 aa5.64□□□□□ -1.51
HOXA9-204ENST00000487384 MRPL16Q9NX20 251 aaKnown RBP5.64□□□□□ -1.51
HOXA9-204ENST00000487384 PRO0255Q9UI72 69 aa5.64□□□□□ -1.51
HOXA9-204ENST00000487384 HHLA3Q9XRX5 114 aa5.64□□□□□ -1.51
HOXA9-204ENST00000487384 C7orf71A4D174 169 aa5.63□□□□□ -1.51
HOXA9-204ENST00000487384 LRCOL1A6NCL2 159 aa5.63□□□□□ -1.51
HOXA9-204ENST00000487384 H3BQ15 152 aa5.63□□□□□ -1.51
HOXA9-204ENST00000487384 SPINK4O60575 86 aa5.63□□□□□ -1.51
HOXA9-204ENST00000487384 PLA2G1BP04054 148 aaKnown RBP5.63□□□□□ -1.51
HOXA9-204ENST00000487384 SLC25A6P12236 298 aa5.63□□□□□ -1.51
HOXA9-204ENST00000487384 RNASE4P34096 147 aaKnown RBP5.63□□□□□ -1.51
HOXA9-204ENST00000487384 POLR2GP62487 172 aaKnown RBP eCLIP5.63□□□□□ -1.51
HOXA9-204ENST00000487384 CD300CQ08708 224 aa5.63□□□□□ -1.51
HOXA9-204ENST00000487384 ZNF415Q09FC8 603 aa5.63□□□□□ -1.51
HOXA9-204ENST00000487384 ERCC8Q13216 396 aa5.63□□□□□ -1.51
HOXA9-204ENST00000487384 CFAP161Q6P656 301 aa5.63□□□□□ -1.51
HOXA9-204ENST00000487384 S100A7AQ86SG5 101 aa5.63□□□□□ -1.51
HOXA9-204ENST00000487384 BPIFA4PQ86YQ2 179 aa5.63□□□□□ -1.51
HOXA9-204ENST00000487384 EIF4E3Q8N5X7 224 aaKnown RBP5.63□□□□□ -1.51
HOXA9-204ENST00000487384 PSENENQ9NZ42 101 aa5.63□□□□□ -1.51
HOXA9-204ENST00000487384 RABL2AQ9UBK7 228 aaPredicted RBP5.63□□□□□ -1.51
HOXA9-204ENST00000487384 TP53TG3Q9ULZ0 132 aa5.63□□□□□ -1.51
HOXA9-204ENST00000487384 PIGBOS1A0A0B4J2F0 54 aa5.62□□□□□ -1.51
HOXA9-204ENST00000487384 K7EQD1 137 aa5.62□□□□□ -1.51
HOXA9-204ENST00000487384 GOSR2O14653 212 aa5.62□□□□□ -1.51
HOXA9-204ENST00000487384 CTDSPLO15194 276 aa5.62□□□□□ -1.51
HOXA9-204ENST00000487384 SSSCA1O60232 199 aa5.62□□□□□ -1.51
HOXA9-204ENST00000487384 COX7A2P2O60397 106 aa5.62□□□□□ -1.51
HOXA9-204ENST00000487384 SLC25A5P05141 298 aaKnown RBP5.62□□□□□ -1.51
HOXA9-204ENST00000487384 SFTA3P0C7M3 94 aa5.62□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms