RNA–Protein interactions for RNA: ENST00000487354.1

MCF2L-228, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 3

Gene MCF2L, Length 553 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-228ENST00000487354 SELENOTP62341 195 aa10.36□□□□□ -0.75
MCF2L-228ENST00000487354 SLC38A11Q08AI6 406 aa10.36□□□□□ -0.75
MCF2L-228ENST00000487354 LYPD5Q6UWN5 251 aa10.36□□□□□ -0.75
MCF2L-228ENST00000487354 NFE4Q86UQ8 179 aa10.36□□□□□ -0.75
MCF2L-228ENST00000487354 SAT2Q96F10 170 aaPredicted RBP10.36□□□□□ -0.75
MCF2L-228ENST00000487354 FUT9Q9Y231 359 aa10.36□□□□□ -0.75
MCF2L-228ENST00000487354 ICOSQ9Y6W8 199 aa10.36□□□□□ -0.75
MCF2L-228ENST00000487354 TRGV2A0A075B6R0 118 aa10.35□□□□□ -0.75
MCF2L-228ENST00000487354 H3BQ15 152 aa10.35□□□□□ -0.75
MCF2L-228ENST00000487354 FAM229AH3BQW9 127 aa10.35□□□□□ -0.75
MCF2L-228ENST00000487354 SPINK4O60575 86 aa10.35□□□□□ -0.75
MCF2L-228ENST00000487354 DIRAS2Q96HU8 199 aa10.35□□□□□ -0.75
MCF2L-228ENST00000487354 SOSTQ9BQB4 213 aa10.35□□□□□ -0.75
MCF2L-228ENST00000487354 KLF12Q9Y4X4 402 aa10.35□□□□□ -0.75
MCF2L-228ENST00000487354 TRGV1A0A0A0MS02 117 aa10.34□□□□□ -0.75
MCF2L-228ENST00000487354 SFT2D2O95562 160 aa10.34□□□□□ -0.75
MCF2L-228ENST00000487354 HOXB5P09067 269 aa10.34□□□□□ -0.75
MCF2L-228ENST00000487354 VAMP1P23763 118 aa10.34□□□□□ -0.75
MCF2L-228ENST00000487354 RRAS2P62070 204 aaPredicted RBP10.34□□□□□ -0.75
MCF2L-228ENST00000487354 POLR2GP62487 172 aaKnown RBP eCLIP10.34□□□□□ -0.75
MCF2L-228ENST00000487354 ID3Q02535 119 aa10.34□□□□□ -0.75
MCF2L-228ENST00000487354 PPP1R1AQ13522 171 aa10.34□□□□□ -0.75
MCF2L-228ENST00000487354 C4orf46Q504U0 113 aa10.34□□□□□ -0.75
MCF2L-228ENST00000487354 LINC00305Q7Z4B0 112 aa10.34□□□□□ -0.75
MCF2L-228ENST00000487354 WFDC10BQ8IUB3 73 aa10.34□□□□□ -0.75
MCF2L-228ENST00000487354 TMEM37Q8WXS4 190 aa10.34□□□□□ -0.75
MCF2L-228ENST00000487354 ST6GAL2Q96JF0 529 aa10.34□□□□□ -0.75
MCF2L-228ENST00000487354 FAM19A4Q96LR4 140 aa10.34□□□□□ -0.75
MCF2L-228ENST00000487354 TMEM70Q9BUB7 260 aa10.34□□□□□ -0.75
MCF2L-228ENST00000487354 MSRB1Q9NZV6 116 aa10.34□□□□□ -0.75
MCF2L-228ENST00000487354 FAM30AQ9NZY2 134 aa10.34□□□□□ -0.75
MCF2L-228ENST00000487354 PIGBOS1A0A0B4J2F0 54 aa10.33□□□□□ -0.76
MCF2L-228ENST00000487354 LRCOL1A6NCL2 159 aa10.33□□□□□ -0.76
MCF2L-228ENST00000487354 KRTAP29-1A8MX34 341 aaPredicted RBP10.33□□□□□ -0.76
MCF2L-228ENST00000487354 KLLNB2CW77 178 aa10.33□□□□□ -0.76
MCF2L-228ENST00000487354 PAX4O43316 350 aa10.33□□□□□ -0.76
MCF2L-228ENST00000487354 ANXA7P20073 488 aaKnown RBP10.33□□□□□ -0.76
MCF2L-228ENST00000487354 LEPP41159 167 aa10.33□□□□□ -0.76
MCF2L-228ENST00000487354 CRYBA4P53673 196 aa10.33□□□□□ -0.76
MCF2L-228ENST00000487354 TCL1AP56279 114 aa10.33□□□□□ -0.76
MCF2L-228ENST00000487354 OPCMLQ14982 345 aa10.33□□□□□ -0.76
MCF2L-228ENST00000487354 TMEM14EPQ6UXP3 125 aa10.33□□□□□ -0.76
MCF2L-228ENST00000487354 ZNF680Q8NEM1 530 aa10.33□□□□□ -0.76
MCF2L-228ENST00000487354 TRIM63Q969Q1 353 aa10.33□□□□□ -0.76
MCF2L-228ENST00000487354 IGHV3-53P01767 116 aa10.32□□□□□ -0.76
MCF2L-228ENST00000487354 CD300CQ08708 224 aa10.32□□□□□ -0.76
MCF2L-228ENST00000487354 ANXA2RQ3ZCQ2 193 aa10.32□□□□□ -0.76
MCF2L-228ENST00000487354 PSENENQ9NZ42 101 aa10.32□□□□□ -0.76
MCF2L-228ENST00000487354 RABL2AQ9UBK7 228 aaPredicted RBP10.32□□□□□ -0.76
MCF2L-228ENST00000487354 LY96Q9Y6Y9 160 aa10.32□□□□□ -0.76
MCF2L-228ENST00000487354 C7orf71A4D174 169 aa10.31□□□□□ -0.76
MCF2L-228ENST00000487354 FNDC10F2Z333 226 aa10.31□□□□□ -0.76
MCF2L-228ENST00000487354 ARL16Q0P5N6 197 aa10.31□□□□□ -0.76
MCF2L-228ENST00000487354 BTN1A1Q13410 526 aa10.31□□□□□ -0.76
MCF2L-228ENST00000487354 FHL2Q14192 279 aa10.31□□□□□ -0.76
MCF2L-228ENST00000487354 PXDC1Q5TGL8 231 aa10.31□□□□□ -0.76
MCF2L-228ENST00000487354 Q6ZQT7 251 aa10.31□□□□□ -0.76
MCF2L-228ENST00000487354 BPIFA4PQ86YQ2 179 aa10.31□□□□□ -0.76
MCF2L-228ENST00000487354 NPVFQ9HCQ7 196 aa10.31□□□□□ -0.76
MCF2L-228ENST00000487354 PRO0255Q9UI72 69 aa10.31□□□□□ -0.76
MCF2L-228ENST00000487354 TP53TG3Q9ULZ0 132 aa10.31□□□□□ -0.76
MCF2L-228ENST00000487354 PXMP4Q9Y6I8 212 aa10.31□□□□□ -0.76
MCF2L-228ENST00000487354 SSSCA1O60232 199 aa10.3□□□□□ -0.76
MCF2L-228ENST00000487354 SLC25A5P05141 298 aaKnown RBP10.3□□□□□ -0.76
MCF2L-228ENST00000487354 METTL15P1P0C7V9 234 aa10.3□□□□□ -0.76
MCF2L-228ENST00000487354 ERCC8Q13216 396 aa10.3□□□□□ -0.76
MCF2L-228ENST00000487354 PRR9Q5T870 116 aa10.3□□□□□ -0.76
MCF2L-228ENST00000487354 EIF4E3Q8N5X7 224 aaKnown RBP10.3□□□□□ -0.76
MCF2L-228ENST00000487354 DYNC2LI1Q8TCX1 351 aa10.3□□□□□ -0.76
MCF2L-228ENST00000487354 SMIM8Q96KF7 97 aa10.3□□□□□ -0.76
MCF2L-228ENST00000487354 C8orf49Q96NF6 230 aa10.3□□□□□ -0.76
MCF2L-228ENST00000487354 MGST2Q99735 147 aa10.3□□□□□ -0.76
MCF2L-228ENST00000487354 VGLL1Q99990 258 aa10.3□□□□□ -0.76
MCF2L-228ENST00000487354 MRPL16Q9NX20 251 aaKnown RBP10.3□□□□□ -0.76
MCF2L-228ENST00000487354 CCDC59Q9P031 241 aaKnown RBP10.3□□□□□ -0.76
MCF2L-228ENST00000487354 RSL24D1Q9UHA3 163 aaKnown RBP10.3□□□□□ -0.76
MCF2L-228ENST00000487354 IGLV5-52A0A0A0MRZ9 124 aa10.29□□□□□ -0.76
MCF2L-228ENST00000487354 TRAV5A0A0B4J249 113 aa10.29□□□□□ -0.76
MCF2L-228ENST00000487354 M0R3E3 92 aa10.29□□□□□ -0.76
MCF2L-228ENST00000487354 AGPAT2O15120 278 aa10.29□□□□□ -0.76
MCF2L-228ENST00000487354 PRAF2O60831 178 aa10.29□□□□□ -0.76
MCF2L-228ENST00000487354 S100A7AQ86SG5 101 aa10.29□□□□□ -0.76
MCF2L-228ENST00000487354 ZNF546Q86UE3 836 aa10.29□□□□□ -0.76
MCF2L-228ENST00000487354 K7EQD1 137 aa10.28□□□□□ -0.76
MCF2L-228ENST00000487354 MRPL23Q16540 153 aaKnown RBP10.28□□□□□ -0.76
MCF2L-228ENST00000487354 IBA57Q5T440 356 aaKnown RBP10.28□□□□□ -0.76
MCF2L-228ENST00000487354 NEGR1Q7Z3B1 354 aa10.28□□□□□ -0.76
MCF2L-228ENST00000487354 HHLA3Q9XRX5 114 aa10.28□□□□□ -0.76
MCF2L-228ENST00000487354 RNF24Q9Y225 148 aa10.28□□□□□ -0.76
MCF2L-228ENST00000487354 PKHD1L1Q86WI1 4243 aa10.27□□□□□ -0.76
MCF2L-228ENST00000487354 TRAV9-2A0A087WT02 112 aa10.27□□□□□ -0.77
MCF2L-228ENST00000487354 K7EP13 123 aa10.27□□□□□ -0.77
MCF2L-228ENST00000487354 COX7A2P2O60397 106 aa10.27□□□□□ -0.77
MCF2L-228ENST00000487354 TNFSF8P32971 234 aa10.27□□□□□ -0.77
MCF2L-228ENST00000487354 ZFAND2AQ8N6M9 145 aa10.27□□□□□ -0.77
MCF2L-228ENST00000487354 NTN5Q8WTR8 489 aaPredicted RBP10.27□□□□□ -0.77
MCF2L-228ENST00000487354 SLIRPQ9GZT3 109 aaKnown RBP10.27□□□□□ -0.77
MCF2L-228ENST00000487354 AGPAT4-IT1Q9H0P7 198 aa10.27□□□□□ -0.77
MCF2L-228ENST00000487354 RCL1Q9Y2P8 373 aaKnown RBP10.27□□□□□ -0.77
MCF2L-228ENST00000487354 GOSR2O14653 212 aa10.26□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 49.9 ms