RNA–Protein interactions for RNA: ENST00000487215.1

SMPDL3A-202, Transcript of sphingomyelin phosphodiesterase acid like 3A, humanhuman

TSL 2

Gene SMPDL3A, Length 903 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPDL3A-202ENST00000487215 SNURFLB1AK76 121 aa13.37□□□□□ -0.27
SMPDL3A-202ENST00000487215 SNRPCP09234 159 aaKnown RBP13.37□□□□□ -0.27
SMPDL3A-202ENST00000487215 CXCL2P19875 107 aa13.37□□□□□ -0.27
SMPDL3A-202ENST00000487215 ANXA7P20073 488 aaKnown RBP13.37□□□□□ -0.27
SMPDL3A-202ENST00000487215 RRAS2P62070 204 aaPredicted RBP13.37□□□□□ -0.27
SMPDL3A-202ENST00000487215 ZNF546Q86UE3 836 aa13.37□□□□□ -0.27
SMPDL3A-202ENST00000487215 ARL6Q9H0F7 186 aa13.37□□□□□ -0.27
SMPDL3A-202ENST00000487215 TMPRSS5Q9H3S3 457 aa13.37□□□□□ -0.27
SMPDL3A-202ENST00000487215 GSKIPQ9P0R6 139 aa13.37□□□□□ -0.27
SMPDL3A-202ENST00000487215 LINC00854A0A1B0GVQ3 168 aa13.36□□□□□ -0.27
SMPDL3A-202ENST00000487215 GOSR2O14653 212 aa13.36□□□□□ -0.27
SMPDL3A-202ENST00000487215 FUSP35637 526 aaKnown RBP eCLIP13.36□□□□□ -0.27
SMPDL3A-202ENST00000487215 LCN15Q6UWW0 184 aa13.36□□□□□ -0.27
SMPDL3A-202ENST00000487215 MITD1Q8WV92 249 aa13.36□□□□□ -0.27
SMPDL3A-202ENST00000487215 SLC50A1Q9BRV3 221 aa13.36□□□□□ -0.27
SMPDL3A-202ENST00000487215 ARV1Q9H2C2 271 aa13.36□□□□□ -0.27
SMPDL3A-202ENST00000487215 A0A096LPF7 62 aa13.35□□□□□ -0.27
SMPDL3A-202ENST00000487215 PRAC2D3DTV9 90 aa13.35□□□□□ -0.27
SMPDL3A-202ENST00000487215 CCNKO75909 580 aa13.35□□□□□ -0.27
SMPDL3A-202ENST00000487215 ZNF846Q147U1 533 aa13.35□□□□□ -0.27
SMPDL3A-202ENST00000487215 LYPD1Q8N2G4 141 aa13.35□□□□□ -0.27
SMPDL3A-202ENST00000487215 ZBTB8BQ8NAP8 495 aaPredicted RBP13.35□□□□□ -0.27
SMPDL3A-202ENST00000487215 VSIG2Q96IQ7 327 aa13.35□□□□□ -0.27
SMPDL3A-202ENST00000487215 XGP55808 180 aa13.34□□□□□ -0.27
SMPDL3A-202ENST00000487215 SLC38A11Q08AI6 406 aa13.34□□□□□ -0.27
SMPDL3A-202ENST00000487215 RAB31Q13636 194 aa13.34□□□□□ -0.27
SMPDL3A-202ENST00000487215 Q6ZTI0 123 aa13.34□□□□□ -0.27
SMPDL3A-202ENST00000487215 PGPEP1Q9NXJ5 209 aa13.34□□□□□ -0.27
SMPDL3A-202ENST00000487215 J3KRW8 73 aa13.33□□□□□ -0.28
SMPDL3A-202ENST00000487215 L7N2F9 121 aa13.33□□□□□ -0.28
SMPDL3A-202ENST00000487215 SLC17A3O00476 420 aa13.33□□□□□ -0.28
SMPDL3A-202ENST00000487215 BTCP35070 178 aa13.33□□□□□ -0.28
SMPDL3A-202ENST00000487215 VAMP2P63027 116 aa13.33□□□□□ -0.28
SMPDL3A-202ENST00000487215 DAZ2Q13117 558 aaKnown RBP13.33□□□□□ -0.28
SMPDL3A-202ENST00000487215 BPIFA4PQ86YQ2 179 aa13.33□□□□□ -0.28
SMPDL3A-202ENST00000487215 PTTG2Q9NZH5 202 aa13.33□□□□□ -0.28
SMPDL3A-202ENST00000487215 DMBT1Q9UGM3 2413 aaPredicted RBP13.33□□□□□ -0.28
SMPDL3A-202ENST00000487215 TRAV12-3A0A0B4J271 114 aa13.32□□□□□ -0.28
SMPDL3A-202ENST00000487215 H3BTX0 84 aa13.32□□□□□ -0.28
SMPDL3A-202ENST00000487215 AGPAT2O15120 278 aa13.32□□□□□ -0.28
SMPDL3A-202ENST00000487215 IL7P13232 177 aa13.32□□□□□ -0.28
SMPDL3A-202ENST00000487215 Q5VSD8 79 aa13.32□□□□□ -0.28
SMPDL3A-202ENST00000487215 LINC00305Q7Z4B0 112 aa13.32□□□□□ -0.28
SMPDL3A-202ENST00000487215 SDHCQ99643 169 aaPredicted RBP13.32□□□□□ -0.28
SMPDL3A-202ENST00000487215 RCL1Q9Y2P8 373 aaKnown RBP13.32□□□□□ -0.28
SMPDL3A-202ENST00000487215 C7orf66A4D0T2 115 aa13.31□□□□□ -0.28
SMPDL3A-202ENST00000487215 SIVA1O15304 175 aa13.31□□□□□ -0.28
SMPDL3A-202ENST00000487215 COX7A2P2O60397 106 aa13.31□□□□□ -0.28
SMPDL3A-202ENST00000487215 MBPP02686 304 aaPredicted RBP13.31□□□□□ -0.28
SMPDL3A-202ENST00000487215 ERVFC1-1P60608 527 aa13.31□□□□□ -0.28
SMPDL3A-202ENST00000487215 CDPF1Q6NVV7 123 aa13.31□□□□□ -0.28
SMPDL3A-202ENST00000487215 PYGO2Q9BRQ0 406 aa13.31□□□□□ -0.28
SMPDL3A-202ENST00000487215 C20orf85Q9H1P6 137 aa13.31□□□□□ -0.28
SMPDL3A-202ENST00000487215 EREGO14944 169 aa13.3□□□□□ -0.28
SMPDL3A-202ENST00000487215 CT45A10P0DMU9 189 aa13.3□□□□□ -0.28
SMPDL3A-202ENST00000487215 LEPP41159 167 aa13.3□□□□□ -0.28
SMPDL3A-202ENST00000487215 Q6ZRG5 221 aa13.3□□□□□ -0.28
SMPDL3A-202ENST00000487215 ZNF431Q8TF32 576 aaPredicted RBP13.3□□□□□ -0.28
SMPDL3A-202ENST00000487215 ODF3Q96PU9 254 aa13.3□□□□□ -0.28
SMPDL3A-202ENST00000487215 MYCBP2O75592 4640 aa13.3□□□□□ -0.28
SMPDL3A-202ENST00000487215 TRGV2A0A075B6R0 118 aa13.29□□□□□ -0.28
SMPDL3A-202ENST00000487215 IGLC2P0DOY2 106 aa13.29□□□□□ -0.28
SMPDL3A-202ENST00000487215 PVALBP20472 110 aaPredicted RBP13.29□□□□□ -0.28
SMPDL3A-202ENST00000487215 BCAP31P51572 246 aa13.29□□□□□ -0.28
SMPDL3A-202ENST00000487215 MORN5Q5VZ52 161 aa13.29□□□□□ -0.28
SMPDL3A-202ENST00000487215 C10orf113Q5VZT2 155 aa13.29□□□□□ -0.28
SMPDL3A-202ENST00000487215 FRZBQ92765 325 aa13.29□□□□□ -0.28
SMPDL3A-202ENST00000487215 C18orf15Q96N68 181 aa13.29□□□□□ -0.28
SMPDL3A-202ENST00000487215 TNFRSF18Q9Y5U5 241 aa13.29□□□□□ -0.28
SMPDL3A-202ENST00000487215 PXMP4Q9Y6I8 212 aa13.29□□□□□ -0.28
SMPDL3A-202ENST00000487215 NPIPB6E9PJ23 425 aa13.28□□□□□ -0.28
SMPDL3A-202ENST00000487215 LYRM1O43325 122 aa13.28□□□□□ -0.28
SMPDL3A-202ENST00000487215 NXPH4O95158 308 aa13.28□□□□□ -0.28
SMPDL3A-202ENST00000487215 ARL16Q0P5N6 197 aa13.28□□□□□ -0.28
SMPDL3A-202ENST00000487215 C11orf72Q8NBR9 251 aa13.28□□□□□ -0.28
SMPDL3A-202ENST00000487215 TMEM37Q8WXS4 190 aa13.28□□□□□ -0.28
SMPDL3A-202ENST00000487215 SAT2Q96F10 170 aaPredicted RBP13.28□□□□□ -0.28
SMPDL3A-202ENST00000487215 DNAJC4Q9NNZ3 241 aa13.28□□□□□ -0.28
SMPDL3A-202ENST00000487215 GSN-AS1Q9NRJ2 163 aa13.28□□□□□ -0.28
SMPDL3A-202ENST00000487215 NDUFA13Q9P0J0 144 aa13.28□□□□□ -0.28
SMPDL3A-202ENST00000487215 VPS13BQ7Z7G8 4022 aa13.28□□□□□ -0.28
SMPDL3A-202ENST00000487215 C5orf51A6NDU8 294 aa13.27□□□□□ -0.29
SMPDL3A-202ENST00000487215 FAM25EA8MYX2 175 aa13.27□□□□□ -0.29
SMPDL3A-202ENST00000487215 H3BQ15 152 aa13.27□□□□□ -0.29
SMPDL3A-202ENST00000487215 TCRBP04435 133 aa13.27□□□□□ -0.29
SMPDL3A-202ENST00000487215 DNAH10OSP0CZ25 163 aa13.27□□□□□ -0.29
SMPDL3A-202ENST00000487215 CAMLGP49069 296 aa13.27□□□□□ -0.29
SMPDL3A-202ENST00000487215 CAV2P51636 162 aa13.27□□□□□ -0.29
SMPDL3A-202ENST00000487215 KRTAP10-1P60331 282 aa13.27□□□□□ -0.29
SMPDL3A-202ENST00000487215 OPCMLQ14982 345 aa13.27□□□□□ -0.29
SMPDL3A-202ENST00000487215 GUK1Q16774 197 aa13.27□□□□□ -0.29
SMPDL3A-202ENST00000487215 OR1L4Q8NGR5 311 aa13.27□□□□□ -0.29
SMPDL3A-202ENST00000487215 MGST2Q99735 147 aa13.27□□□□□ -0.29
SMPDL3A-202ENST00000487215 LSM5Q9Y4Y9 91 aaKnown RBP13.27□□□□□ -0.29
SMPDL3A-202ENST00000487215 TRGV1A0A0A0MS02 117 aa13.26□□□□□ -0.29
SMPDL3A-202ENST00000487215 ZNF680Q8NEM1 530 aa13.26□□□□□ -0.29
SMPDL3A-202ENST00000487215 PFDN5Q99471 154 aa13.26□□□□□ -0.29
SMPDL3A-202ENST00000487215 FUT9Q9Y231 359 aa13.26□□□□□ -0.29
SMPDL3A-202ENST00000487215 A0A087WTM6 91 aa13.25□□□□□ -0.29
SMPDL3A-202ENST00000487215 CCSO14618 274 aa13.25□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 536.3 ms