RNA–Protein interactions for RNA: ENST00000487150.2

LIMS3-205, Transcript of LIM zinc finger domain containing 3, humanhuman

TSL 3 BASIC

Gene LIMS3, Length 782 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS3-205ENST00000487150 HUWE1Q7Z6Z7 4374 aaKnown RBP10.68□□□□□ -0.7
LIMS3-205ENST00000487150 STAB2Q8WWQ8 2551 aa10.68□□□□□ -0.7
LIMS3-205ENST00000487150 ZNF705EA8MWA4 302 aaPredicted RBP10.68□□□□□ -0.7
LIMS3-205ENST00000487150 H3BTX0 84 aa10.68□□□□□ -0.7
LIMS3-205ENST00000487150 INSP01308 110 aa10.68□□□□□ -0.7
LIMS3-205ENST00000487150 SNRPCP09234 159 aaKnown RBP10.68□□□□□ -0.7
LIMS3-205ENST00000487150 GIG44P09565 113 aaPredicted RBP10.68□□□□□ -0.7
LIMS3-205ENST00000487150 OR10J4P0C629 311 aa10.68□□□□□ -0.7
LIMS3-205ENST00000487150 ST6GAL2Q96JF0 529 aa10.68□□□□□ -0.7
LIMS3-205ENST00000487150 ODF3Q96PU9 254 aa10.68□□□□□ -0.7
LIMS3-205ENST00000487150 SH3BGRL3Q9H299 93 aa10.68□□□□□ -0.7
LIMS3-205ENST00000487150 TMEM167BQ9NRX6 74 aa10.68□□□□□ -0.7
LIMS3-205ENST00000487150 SMIM9A6NGZ8 99 aa10.67□□□□□ -0.7
LIMS3-205ENST00000487150 UMAD1C9J7I0 102 aa10.67□□□□□ -0.7
LIMS3-205ENST00000487150 NDUFB4O95168 129 aa10.67□□□□□ -0.7
LIMS3-205ENST00000487150 CXorf1O96002 111 aa10.67□□□□□ -0.7
LIMS3-205ENST00000487150 C1QBP02746 253 aa10.67□□□□□ -0.7
LIMS3-205ENST00000487150 HLA-DMBP28068 263 aa10.67□□□□□ -0.7
LIMS3-205ENST00000487150 DEFB1P60022 68 aa10.67□□□□□ -0.7
LIMS3-205ENST00000487150 EIF5AL1Q6IS14 154 aaKnown RBP10.67□□□□□ -0.7
LIMS3-205ENST00000487150 RPP25LQ8N5L8 163 aaKnown RBP10.67□□□□□ -0.7
LIMS3-205ENST00000487150 CSNK1G2-AS1Q8NCQ2 148 aa10.67□□□□□ -0.7
LIMS3-205ENST00000487150 OR11H4Q8NGC9 324 aa10.67□□□□□ -0.7
LIMS3-205ENST00000487150 RXFP4Q8TDU9 374 aa10.67□□□□□ -0.7
LIMS3-205ENST00000487150 RAB24Q969Q5 203 aa10.67□□□□□ -0.7
LIMS3-205ENST00000487150 HYLS1Q96M11 299 aa10.67□□□□□ -0.7
LIMS3-205ENST00000487150 IGF2BP2-AS1Q96M15 143 aa10.67□□□□□ -0.7
LIMS3-205ENST00000487150 ZNF471Q9BX82 626 aaPredicted RBP10.67□□□□□ -0.7
LIMS3-205ENST00000487150 TMEM189A5PLL7 270 aa10.66□□□□□ -0.7
LIMS3-205ENST00000487150 STAG3L2P0CL84 134 aa10.66□□□□□ -0.7
LIMS3-205ENST00000487150 STAG3L3P0CL85 134 aa10.66□□□□□ -0.7
LIMS3-205ENST00000487150 ARL14EPLP0DKL9 152 aa10.66□□□□□ -0.7
LIMS3-205ENST00000487150 TPT1P13693 172 aaKnown RBP10.66□□□□□ -0.7
LIMS3-205ENST00000487150 ICAM4Q14773 271 aa10.66□□□□□ -0.7
LIMS3-205ENST00000487150 AMTNQ6UX39 209 aa10.66□□□□□ -0.7
LIMS3-205ENST00000487150 TMEM256Q8N2U0 113 aa10.66□□□□□ -0.7
LIMS3-205ENST00000487150 ARL6IP6Q8N6S5 226 aa10.66□□□□□ -0.7
LIMS3-205ENST00000487150 CMTM2Q8TAZ6 248 aa10.66□□□□□ -0.7
LIMS3-205ENST00000487150 NEU1Q99519 415 aa10.66□□□□□ -0.7
LIMS3-205ENST00000487150 SLC35B3Q9H1N7 401 aa10.66□□□□□ -0.7
LIMS3-205ENST00000487150 OTORQ9NRC9 128 aa10.66□□□□□ -0.7
LIMS3-205ENST00000487150 RFNGQ9Y644 331 aa10.66□□□□□ -0.7
LIMS3-205ENST00000487150 hCG_2014768A0A024R1R8 64 aa10.65□□□□□ -0.7
LIMS3-205ENST00000487150 A0A0J9YWU9 116 aa10.65□□□□□ -0.7
LIMS3-205ENST00000487150 CTXND1A0A1B0GTU2 59 aa10.65□□□□□ -0.7
LIMS3-205ENST00000487150 TEX48A0A1B0GUV7 120 aa10.65□□□□□ -0.7
LIMS3-205ENST00000487150 NPIPB6E9PJ23 425 aa10.65□□□□□ -0.7
LIMS3-205ENST00000487150 SEC11BP0C7V7 166 aa10.65□□□□□ -0.7
LIMS3-205ENST00000487150 LEPP41159 167 aa10.65□□□□□ -0.7
LIMS3-205ENST00000487150 CDKN1BP46527 198 aa10.65□□□□□ -0.7
LIMS3-205ENST00000487150 ZNF705AQ6ZN79 300 aaPredicted RBP10.65□□□□□ -0.7
LIMS3-205ENST00000487150 ZNF503Q96F45 646 aa10.65□□□□□ -0.7
LIMS3-205ENST00000487150 PHYHIPLQ96FC7 376 aa10.65□□□□□ -0.7
LIMS3-205ENST00000487150 LINC00477Q96M19 166 aa10.65□□□□□ -0.7
LIMS3-205ENST00000487150 C20orf144Q9BQM9 153 aa10.65□□□□□ -0.7
LIMS3-205ENST00000487150 TMEM208Q9BTX3 173 aa10.65□□□□□ -0.7
LIMS3-205ENST00000487150 Q9H3A6 140 aa10.65□□□□□ -0.7
LIMS3-205ENST00000487150 CYTL1Q9NRR1 136 aa10.65□□□□□ -0.7
LIMS3-205ENST00000487150 COL7A1Q02388 2944 aa10.65□□□□□ -0.7
LIMS3-205ENST00000487150 SERTM2A0A1B0GWG4 89 aa10.64□□□□□ -0.71
LIMS3-205ENST00000487150 RBAKDNA6NC62 111 aa10.64□□□□□ -0.71
LIMS3-205ENST00000487150 ZNF705FA8MVS1 300 aaPredicted RBP10.64□□□□□ -0.71
LIMS3-205ENST00000487150 M0R3E3 92 aa10.64□□□□□ -0.71
LIMS3-205ENST00000487150 HBE1P02100 147 aa10.64□□□□□ -0.71
LIMS3-205ENST00000487150 SLC25A5P05141 298 aaKnown RBP10.64□□□□□ -0.71
LIMS3-205ENST00000487150 ZNF705DP0CH99 300 aaPredicted RBP10.64□□□□□ -0.71
LIMS3-205ENST00000487150 ZNF705BP0CI00 300 aaPredicted RBP10.64□□□□□ -0.71
LIMS3-205ENST00000487150 RANP62826 216 aaKnown RBP10.64□□□□□ -0.71
LIMS3-205ENST00000487150 SPINK13Q1W4C9 94 aa10.64□□□□□ -0.71
LIMS3-205ENST00000487150 TMEM78Q5T7P6 136 aa10.64□□□□□ -0.71
LIMS3-205ENST00000487150 DPPA3Q6W0C5 159 aa10.64□□□□□ -0.71
LIMS3-205ENST00000487150 TMUB2Q71RG4 321 aa10.64□□□□□ -0.71
LIMS3-205ENST00000487150 EXOC3-AS1Q8N2X6 119 aa10.64□□□□□ -0.71
LIMS3-205ENST00000487150 STOML3Q8TAV4 291 aa10.64□□□□□ -0.71
LIMS3-205ENST00000487150 TRBV7-9A0A0J9YWB2 115 aa10.63□□□□□ -0.71
LIMS3-205ENST00000487150 M0R2Z0 102 aa10.63□□□□□ -0.71
LIMS3-205ENST00000487150 GCHFRP30047 84 aa10.63□□□□□ -0.71
LIMS3-205ENST00000487150 FXYD7P58549 80 aa10.63□□□□□ -0.71
LIMS3-205ENST00000487150 BAP18Q8IXM2 172 aa10.63□□□□□ -0.71
LIMS3-205ENST00000487150 Q8NAQ8 132 aa10.63□□□□□ -0.71
LIMS3-205ENST00000487150 IGHV4-28A0A0C4DH34 117 aa10.62□□□□□ -0.71
LIMS3-205ENST00000487150 NMBP08949 121 aa10.62□□□□□ -0.71
LIMS3-205ENST00000487150 ZFP69Q49AA0 526 aa10.62□□□□□ -0.71
LIMS3-205ENST00000487150 C9orf47Q6ZRZ4 202 aa10.62□□□□□ -0.71
LIMS3-205ENST00000487150 IQCF2Q8IXL9 164 aa10.62□□□□□ -0.71
LIMS3-205ENST00000487150 X6R8D5 127 aa10.62□□□□□ -0.71
LIMS3-205ENST00000487150 IGHV3OR16-12A0A075B7B8 117 aa10.61□□□□□ -0.71
LIMS3-205ENST00000487150 PRAC2D3DTV9 90 aa10.61□□□□□ -0.71
LIMS3-205ENST00000487150 K7EQM0 130 aa10.61□□□□□ -0.71
LIMS3-205ENST00000487150 HMGB3O15347 200 aaKnown RBP10.61□□□□□ -0.71
LIMS3-205ENST00000487150 RAB5CP51148 216 aa10.61□□□□□ -0.71
LIMS3-205ENST00000487150 RRN3P1Q2M238 152 aa10.61□□□□□ -0.71
LIMS3-205ENST00000487150 C5orf17Q8NAS9 161 aa10.61□□□□□ -0.71
LIMS3-205ENST00000487150 SUN5Q8TC36 379 aa10.61□□□□□ -0.71
LIMS3-205ENST00000487150 NKX6-2Q9C056 277 aaPredicted RBP10.61□□□□□ -0.71
LIMS3-205ENST00000487150 MAP1LC3B2A6NCE7 125 aa10.6□□□□□ -0.71
LIMS3-205ENST00000487150 H7BYZ3 331 aa10.6□□□□□ -0.71
LIMS3-205ENST00000487150 TAS2R60P59551 318 aa10.6□□□□□ -0.71
LIMS3-205ENST00000487150 SLC51BQ86UW2 128 aa10.6□□□□□ -0.71
LIMS3-205ENST00000487150 C11orf45Q8TAV5 145 aa10.6□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 140.1 ms