RNA–Protein interactions for RNA: ENST00000486935.2

SEMA4D-219, Transcript of semaphorin 4D, humanhuman

TSL 2

Gene SEMA4D, Length 969 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA4D-219ENST00000486935 TSPAN4O14817 238 aa11.44□□□□□ -0.58
SEMA4D-219ENST00000486935 MEOX2P50222 304 aa11.44□□□□□ -0.58
SEMA4D-219ENST00000486935 RANP62826 216 aaKnown RBP11.44□□□□□ -0.58
SEMA4D-219ENST00000486935 PAFAH1B2P68402 229 aa11.44□□□□□ -0.58
SEMA4D-219ENST00000486935 IGFL4Q6B9Z1 124 aa11.44□□□□□ -0.58
SEMA4D-219ENST00000486935 LYPD6BQ8NI32 183 aa11.44□□□□□ -0.58
SEMA4D-219ENST00000486935 C16orf92Q96LL3 132 aa11.44□□□□□ -0.58
SEMA4D-219ENST00000486935 SPAG8Q99932 426 aaPredicted RBP11.44□□□□□ -0.58
SEMA4D-219ENST00000486935 NDUFB4O95168 129 aa11.43□□□□□ -0.58
SEMA4D-219ENST00000486935 IFNA1P01562 189 aa11.43□□□□□ -0.58
SEMA4D-219ENST00000486935 PPT1P50897 306 aa11.43□□□□□ -0.58
SEMA4D-219ENST00000486935 IL17DQ8TAD2 202 aa11.43□□□□□ -0.58
SEMA4D-219ENST00000486935 SUN5Q8TC36 379 aa11.43□□□□□ -0.58
SEMA4D-219ENST00000486935 SLC50A1Q9BRV3 221 aa11.43□□□□□ -0.58
SEMA4D-219ENST00000486935 YTHDF2Q9Y5A9 579 aaKnown RBP11.43□□□□□ -0.58
SEMA4D-219ENST00000486935 STARD9Q9P2P6 4700 aa11.42□□□□□ -0.58
SEMA4D-219ENST00000486935 K7EQG2 157 aa11.42□□□□□ -0.58
SEMA4D-219ENST00000486935 SOCS3O14543 225 aa11.42□□□□□ -0.58
SEMA4D-219ENST00000486935 PAGE4O60829 102 aa11.42□□□□□ -0.58
SEMA4D-219ENST00000486935 HLA-DMBP28068 263 aa11.42□□□□□ -0.58
SEMA4D-219ENST00000486935 PSG9Q00887 426 aa11.42□□□□□ -0.58
SEMA4D-219ENST00000486935 PDE6HQ13956 83 aa11.42□□□□□ -0.58
SEMA4D-219ENST00000486935 CST9LP1Q5W188 147 aa11.42□□□□□ -0.58
SEMA4D-219ENST00000486935 EXOC3-AS1Q8N2X6 119 aa11.42□□□□□ -0.58
SEMA4D-219ENST00000486935 RNF182Q8N6D2 247 aa11.42□□□□□ -0.58
SEMA4D-219ENST00000486935 DCANP1Q8TF63 244 aa11.42□□□□□ -0.58
SEMA4D-219ENST00000486935 Q9H3A6 140 aa11.42□□□□□ -0.58
SEMA4D-219ENST00000486935 MANBALQ9NQG1 85 aa11.42□□□□□ -0.58
SEMA4D-219ENST00000486935 ZNF331Q9NQX6 463 aaPredicted RBP11.42□□□□□ -0.58
SEMA4D-219ENST00000486935 TRAV8-2A0A0B4J237 113 aa11.41□□□□□ -0.58
SEMA4D-219ENST00000486935 FAM74A7A6NL05 159 aa11.41□□□□□ -0.58
SEMA4D-219ENST00000486935 ZNF253O75346 499 aa11.41□□□□□ -0.58
SEMA4D-219ENST00000486935 ICAM4Q14773 271 aa11.41□□□□□ -0.58
SEMA4D-219ENST00000486935 FAM24BQ8N5W8 94 aa11.41□□□□□ -0.58
SEMA4D-219ENST00000486935 LINC00052Q96N35 136 aa11.41□□□□□ -0.58
SEMA4D-219ENST00000486935 OVOL2Q9BRP0 275 aa11.41□□□□□ -0.58
SEMA4D-219ENST00000486935 AAMDCQ9H7C9 122 aa11.41□□□□□ -0.58
SEMA4D-219ENST00000486935 CSMD3Q7Z407 3707 aa11.4□□□□□ -0.58
SEMA4D-219ENST00000486935 TRAV2A0A0B4J234 112 aa11.4□□□□□ -0.58
SEMA4D-219ENST00000486935 A0A1W2PRE2 83 aa11.4□□□□□ -0.58
SEMA4D-219ENST00000486935 OR4C46A6NHA9 309 aa11.4□□□□□ -0.58
SEMA4D-219ENST00000486935 ISLRO14498 428 aa11.4□□□□□ -0.58
SEMA4D-219ENST00000486935 ZNF688P0C7X2 276 aa11.4□□□□□ -0.58
SEMA4D-219ENST00000486935 PRB4P10163 310 aaPredicted RBP11.4□□□□□ -0.58
SEMA4D-219ENST00000486935 BCL2P10415 239 aa11.4□□□□□ -0.58
SEMA4D-219ENST00000486935 ID1P41134 155 aa11.4□□□□□ -0.58
SEMA4D-219ENST00000486935 ATP5G3P48201 142 aa11.4□□□□□ -0.58
SEMA4D-219ENST00000486935 TOR2AQ5JU69 321 aa11.4□□□□□ -0.58
SEMA4D-219ENST00000486935 SAMD13Q5VXD3 122 aa11.4□□□□□ -0.58
SEMA4D-219ENST00000486935 C20orf173Q96LM9 149 aa11.4□□□□□ -0.58
SEMA4D-219ENST00000486935 OTORQ9NRC9 128 aa11.4□□□□□ -0.58
SEMA4D-219ENST00000486935 LOC102723971A0A1B0GUV8 181 aa11.39□□□□□ -0.59
SEMA4D-219ENST00000486935 PGPA6NDG6 321 aa11.39□□□□□ -0.59
SEMA4D-219ENST00000486935 GGTLC3B5MD39 225 aa11.39□□□□□ -0.59
SEMA4D-219ENST00000486935 RARRES2Q99969 163 aa11.39□□□□□ -0.59
SEMA4D-219ENST00000486935 RPH3ALQ9UNE2 315 aa11.39□□□□□ -0.59
SEMA4D-219ENST00000486935 RBFOX3A6NFN3 312 aa11.38□□□□□ -0.59
SEMA4D-219ENST00000486935 C11orf94C9JXX5 98 aa11.38□□□□□ -0.59
SEMA4D-219ENST00000486935 M0R3E3 92 aa11.38□□□□□ -0.59
SEMA4D-219ENST00000486935 SLC25A5P05141 298 aaKnown RBP11.38□□□□□ -0.59
SEMA4D-219ENST00000486935 APOC4P55056 127 aa11.38□□□□□ -0.59
SEMA4D-219ENST00000486935 SNRPD3P62318 126 aaKnown RBP11.38□□□□□ -0.59
SEMA4D-219ENST00000486935 SUMO1P63165 101 aaKnown RBP11.38□□□□□ -0.59
SEMA4D-219ENST00000486935 PSMG4Q5JS54 123 aa11.38□□□□□ -0.59
SEMA4D-219ENST00000486935 LYPD1Q8N2G4 141 aa11.38□□□□□ -0.59
SEMA4D-219ENST00000486935 ZNF738Q8NE65 137 aa11.38□□□□□ -0.59
SEMA4D-219ENST00000486935 RXFP4Q8TDU9 374 aa11.38□□□□□ -0.59
SEMA4D-219ENST00000486935 FAM210AQ96ND0 272 aa11.38□□□□□ -0.59
SEMA4D-219ENST00000486935 EIF5A2Q9GZV4 153 aaKnown RBP11.38□□□□□ -0.59
SEMA4D-219ENST00000486935 VAX2Q9UIW0 290 aa11.38□□□□□ -0.59
SEMA4D-219ENST00000486935 ARL2-SNX15V9GYD0 113 aa11.38□□□□□ -0.59
SEMA4D-219ENST00000486935 ZNF705FA8MVS1 300 aaPredicted RBP11.37□□□□□ -0.59
SEMA4D-219ENST00000486935 RPL35AP18077 110 aaKnown RBP11.37□□□□□ -0.59
SEMA4D-219ENST00000486935 GNG5P63218 68 aa11.37□□□□□ -0.59
SEMA4D-219ENST00000486935 PMS2P11Q13670 270 aa11.37□□□□□ -0.59
SEMA4D-219ENST00000486935 PSG3Q16557 428 aa11.37□□□□□ -0.59
SEMA4D-219ENST00000486935 ODF3L2Q3SX64 289 aa11.37□□□□□ -0.59
SEMA4D-219ENST00000486935 ZNF506Q5JVG8 444 aa11.37□□□□□ -0.59
SEMA4D-219ENST00000486935 CMTM2Q8TAZ6 248 aa11.37□□□□□ -0.59
SEMA4D-219ENST00000486935 SPRY2O43597 315 aa11.36□□□□□ -0.59
SEMA4D-219ENST00000486935 TAGLN2P37802 199 aaKnown RBP11.36□□□□□ -0.59
SEMA4D-219ENST00000486935 CSN1S1P47710 185 aa11.36□□□□□ -0.59
SEMA4D-219ENST00000486935 DEFB131AP59861 70 aa11.36□□□□□ -0.59
SEMA4D-219ENST00000486935 MEF2BQ02080 365 aaPredicted RBP11.36□□□□□ -0.59
SEMA4D-219ENST00000486935 Q6ZWC4 215 aa11.36□□□□□ -0.59
SEMA4D-219ENST00000486935 COMMD7Q86VX2 200 aa11.36□□□□□ -0.59
SEMA4D-219ENST00000486935 APRG1Q8IVJ8 170 aa11.36□□□□□ -0.59
SEMA4D-219ENST00000486935 C5orf17Q8NAS9 161 aa11.36□□□□□ -0.59
SEMA4D-219ENST00000486935 LYSTQ99698 3801 aa11.36□□□□□ -0.59
SEMA4D-219ENST00000486935 NKX6-2Q9C056 277 aaPredicted RBP11.36□□□□□ -0.59
SEMA4D-219ENST00000486935 MAP6D1Q9H9H5 199 aa11.36□□□□□ -0.59
SEMA4D-219ENST00000486935 CLEC5AQ9NY25 188 aa11.36□□□□□ -0.59
SEMA4D-219ENST00000486935 PRELID1Q9Y255 219 aa11.36□□□□□ -0.59
SEMA4D-219ENST00000486935 UBE2CO00762 179 aa11.35□□□□□ -0.59
SEMA4D-219ENST00000486935 DEFB1P60022 68 aa11.35□□□□□ -0.59
SEMA4D-219ENST00000486935 DEFB135Q30KP9 77 aa11.35□□□□□ -0.59
SEMA4D-219ENST00000486935 RPUSD4Q96CM3 377 aaKnown RBP11.35□□□□□ -0.59
SEMA4D-219ENST00000486935 A0A0J9YWU9 116 aa11.34□□□□□ -0.59
SEMA4D-219ENST00000486935 SCO2A0A1W2PP80 73 aa11.34□□□□□ -0.59
SEMA4D-219ENST00000486935 LINC00862A6NCI5 91 aa11.34□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms