RNA–Protein interactions for RNA: ENST00000486810.5

COPS3-209, Transcript of COP9 signalosome subunit 3, humanhuman

TSL 3

Gene COPS3, Length 938 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3-209ENST00000486810 FXYD2P54710 66 aa4.15□□□□□ -1.75
COPS3-209ENST00000486810 UBE2D3P61077 147 aa4.15□□□□□ -1.75
COPS3-209ENST00000486810 NPC2P61916 151 aa4.15□□□□□ -1.75
COPS3-209ENST00000486810 UBE2D2P62837 147 aa4.15□□□□□ -1.75
COPS3-209ENST00000486810 FKBP1AP62942 108 aaKnown RBP4.15□□□□□ -1.75
COPS3-209ENST00000486810 MRGPRG-AS1Q2M3A8 158 aa4.15□□□□□ -1.75
COPS3-209ENST00000486810 HMGN2P46Q86SG4 172 aa4.15□□□□□ -1.75
COPS3-209ENST00000486810 C5orf38Q86SI9 138 aa4.15□□□□□ -1.75
COPS3-209ENST00000486810 TMEM252Q8N6L7 170 aa4.15□□□□□ -1.75
COPS3-209ENST00000486810 HDHD3Q9BSH5 251 aaPredicted RBP4.15□□□□□ -1.75
COPS3-209ENST00000486810 UPK3BQ9BT76 320 aa4.15□□□□□ -1.75
COPS3-209ENST00000486810 PLA2G12AQ9BZM1 189 aa4.15□□□□□ -1.75
COPS3-209ENST00000486810 C19orf25Q9UFG5 118 aaPredicted RBP4.15□□□□□ -1.75
COPS3-209ENST00000486810 HHLA3Q9XRX5 114 aa4.15□□□□□ -1.75
COPS3-209ENST00000486810 RALGAPA2Q2PPJ7 1873 aa4.15□□□□□ -1.75
COPS3-209ENST00000486810 COL11A1P12107 1806 aaPredicted RBP4.14□□□□□ -1.75
COPS3-209ENST00000486810 TNRC6CQ9HCJ0 1690 aaKnown RBP4.14□□□□□ -1.75
COPS3-209ENST00000486810 CTXND1A0A1B0GTU2 59 aa4.14□□□□□ -1.75
COPS3-209ENST00000486810 LYRM9A8MSI8 78 aa4.14□□□□□ -1.75
COPS3-209ENST00000486810 C9JCJ5 164 aa4.14□□□□□ -1.75
COPS3-209ENST00000486810 FAM72CH0Y354 149 aa4.14□□□□□ -1.75
COPS3-209ENST00000486810 SCRG1O75711 98 aa4.14□□□□□ -1.75
COPS3-209ENST00000486810 PPYP01298 95 aa4.14□□□□□ -1.75
COPS3-209ENST00000486810 NPYP01303 97 aa4.14□□□□□ -1.75
COPS3-209ENST00000486810 FXYD6P3P58550 94 aa4.14□□□□□ -1.75
COPS3-209ENST00000486810 ERCC8Q13216 396 aa4.14□□□□□ -1.75
COPS3-209ENST00000486810 ZNF726P1Q15940 193 aa4.14□□□□□ -1.75
COPS3-209ENST00000486810 TMEM170BQ5T4T1 132 aa4.14□□□□□ -1.75
COPS3-209ENST00000486810 FHL5Q5TD97 284 aa4.14□□□□□ -1.75
COPS3-209ENST00000486810 FAM72AQ5TYM5 149 aa4.14□□□□□ -1.75
COPS3-209ENST00000486810 FAM72DQ6L9T8 149 aa4.14□□□□□ -1.75
COPS3-209ENST00000486810 FAM72BQ86X60 149 aa4.14□□□□□ -1.75
COPS3-209ENST00000486810 BRK1Q8WUW1 75 aa4.14□□□□□ -1.75
COPS3-209ENST00000486810 KLK6Q92876 244 aa4.14□□□□□ -1.75
COPS3-209ENST00000486810 ZNF799Q96GE5 643 aa4.14□□□□□ -1.75
COPS3-209ENST00000486810 C18orf12Q96KH6 178 aa4.14□□□□□ -1.75
COPS3-209ENST00000486810 C4orf45Q96LM5 186 aa4.14□□□□□ -1.75
COPS3-209ENST00000486810 PRSS27Q9BQR3 290 aa4.14□□□□□ -1.75
COPS3-209ENST00000486810 CHAC1Q9BUX1 264 aa4.14□□□□□ -1.75
COPS3-209ENST00000486810 SLC25A2Q9BXI2 301 aa4.14□□□□□ -1.75
COPS3-209ENST00000486810 PRRG4Q9BZD6 226 aa4.14□□□□□ -1.75
COPS3-209ENST00000486810 OSTCQ9NRP0 149 aa4.14□□□□□ -1.75
COPS3-209ENST00000486810 TP73-AS1Q9UF72 201 aa4.14□□□□□ -1.75
COPS3-209ENST00000486810 F11RQ9Y624 299 aaKnown RBP4.14□□□□□ -1.75
COPS3-209ENST00000486810 DOCK11Q5JSL3 2073 aa4.14□□□□□ -1.75
COPS3-209ENST00000486810 ARHGAP21Q5T5U3 1957 aa4.13□□□□□ -1.75
COPS3-209ENST00000486810 TRAV8-1A0A0A6YYK1 113 aa4.13□□□□□ -1.75
COPS3-209ENST00000486810 MYMXA0A1B0GTQ4 84 aa4.13□□□□□ -1.75
COPS3-209ENST00000486810 hADV29S1A0JD25 119 aa4.13□□□□□ -1.75
COPS3-209ENST00000486810 CRYM-AS1A6NIL9 109 aa4.13□□□□□ -1.75
COPS3-209ENST00000486810 C15orf62A8K5M9 175 aa4.13□□□□□ -1.75
COPS3-209ENST00000486810 LGALS9O00182 355 aa4.13□□□□□ -1.75
COPS3-209ENST00000486810 UPK2O00526 184 aa4.13□□□□□ -1.75
COPS3-209ENST00000486810 MRPS12O15235 138 aaKnown RBP4.13□□□□□ -1.75
COPS3-209ENST00000486810 IL4P05112 153 aa4.13□□□□□ -1.75
COPS3-209ENST00000486810 PRSS1P07477 247 aa4.13□□□□□ -1.75
COPS3-209ENST00000486810 PATE4P0C8F1 98 aa4.13□□□□□ -1.75
COPS3-209ENST00000486810 NPPCP23582 126 aa4.13□□□□□ -1.75
COPS3-209ENST00000486810 AQP1P29972 269 aa4.13□□□□□ -1.75
COPS3-209ENST00000486810 GCHFRP30047 84 aa4.13□□□□□ -1.75
COPS3-209ENST00000486810 APOC4P55056 127 aa4.13□□□□□ -1.75
COPS3-209ENST00000486810 C1orf100Q5SVJ3 147 aa4.13□□□□□ -1.75
COPS3-209ENST00000486810 LINC00305Q7Z4B0 112 aa4.13□□□□□ -1.75
COPS3-209ENST00000486810 LINC00643Q86TS7 51 aa4.13□□□□□ -1.75
COPS3-209ENST00000486810 SERP2Q8N6R1 65 aa4.13□□□□□ -1.75
COPS3-209ENST00000486810 SSMEM1Q8WWF3 244 aa4.13□□□□□ -1.75
COPS3-209ENST00000486810 NMNAT3Q96T66 252 aa4.13□□□□□ -1.75
COPS3-209ENST00000486810 DSCR8Q96T75 97 aa4.13□□□□□ -1.75
COPS3-209ENST00000486810 TM2D3Q9BRN9 247 aa4.13□□□□□ -1.75
COPS3-209ENST00000486810 Q9H8V8 135 aa4.13□□□□□ -1.75
COPS3-209ENST00000486810 NHP2Q9NX24 153 aaKnown RBP4.13□□□□□ -1.75
COPS3-209ENST00000486810 SCN3AQ9NY46 2000 aa4.12□□□□□ -1.75
COPS3-209ENST00000486810 IGHV3OR15-7A0A075B7D8 119 aa4.12□□□□□ -1.75
COPS3-209ENST00000486810 PIGBOS1A0A0B4J2F0 54 aa4.12□□□□□ -1.75
COPS3-209ENST00000486810 IGHV1-58A0A0C4DH39 117 aa4.12□□□□□ -1.75
COPS3-209ENST00000486810 A0A0D9SEW6 157 aa4.12□□□□□ -1.75
COPS3-209ENST00000486810 SMIM27A0A1W2PRY6 76 aa4.12□□□□□ -1.75
COPS3-209ENST00000486810 PLAC8L1A1L4L8 177 aa4.12□□□□□ -1.75
COPS3-209ENST00000486810 SYNGR2O43760 224 aa4.12□□□□□ -1.75
COPS3-209ENST00000486810 CXCL8P10145 99 aa4.12□□□□□ -1.75
COPS3-209ENST00000486810 CCL1P22362 96 aa4.12□□□□□ -1.75
COPS3-209ENST00000486810 CA6P23280 308 aa4.12□□□□□ -1.75
COPS3-209ENST00000486810 DYNLT3P51808 116 aa4.12□□□□□ -1.75
COPS3-209ENST00000486810 UBE2L3P68036 154 aaKnown RBP4.12□□□□□ -1.75
COPS3-209ENST00000486810 C1orf140Q5VVS0 124 aa4.12□□□□□ -1.75
COPS3-209ENST00000486810 PLPP4Q5VZY2 271 aa4.12□□□□□ -1.75
COPS3-209ENST00000486810 SDIM1Q6ZPB5 146 aa4.12□□□□□ -1.75
COPS3-209ENST00000486810 MARCH3Q86UD3 253 aa4.12□□□□□ -1.75
COPS3-209ENST00000486810 PDPNQ86YL7 162 aa4.12□□□□□ -1.75
COPS3-209ENST00000486810 OR5C1Q8NGR4 320 aa4.12□□□□□ -1.75
COPS3-209ENST00000486810 NT5CQ8TCD5 201 aa4.12□□□□□ -1.75
COPS3-209ENST00000486810 TRGV9Q99603 122 aa4.12□□□□□ -1.75
COPS3-209ENST00000486810 LITAFQ99732 161 aa4.12□□□□□ -1.75
COPS3-209ENST00000486810 V9GYV3 84 aa4.12□□□□□ -1.75
COPS3-209ENST00000486810 PCDH15Q96QU1 1955 aa4.11□□□□□ -1.75
COPS3-209ENST00000486810 SMCHD1A6NHR9 2005 aa4.11□□□□□ -1.75
COPS3-209ENST00000486810 PHF3Q92576 2039 aaKnown RBP4.11□□□□□ -1.75
COPS3-209ENST00000486810 SMIM1B2RUZ4 78 aa4.11□□□□□ -1.75
COPS3-209ENST00000486810 NTN3O00634 580 aaPredicted RBP4.11□□□□□ -1.75
COPS3-209ENST00000486810 CCL16O15467 120 aa4.11□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms