RNA–Protein interactions for RNA: ENST00000486184.1

NUP50-216, Transcript of nucleoporin 50, humanhuman

TSL 3

Gene NUP50, Length 821 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-216ENST00000486184 RBMY1BA6NDE4 496 aaKnown RBP8.42□□□□□ -1.06
NUP50-216ENST00000486184 RBMY1EA6NEQ0 496 aaKnown RBP8.42□□□□□ -1.06
NUP50-216ENST00000486184 TEX46H3BTG2 121 aa8.42□□□□□ -1.06
NUP50-216ENST00000486184 DUSP14O95147 198 aaKnown RBP8.42□□□□□ -1.06
NUP50-216ENST00000486184 NDUFB4O95168 129 aa8.42□□□□□ -1.06
NUP50-216ENST00000486184 H2AFB1P0C5Y9 115 aa8.42□□□□□ -1.06
NUP50-216ENST00000486184 RBMY1DP0C7P1 496 aaKnown RBP8.42□□□□□ -1.06
NUP50-216ENST00000486184 HLA-DRB4P13762 266 aa8.42□□□□□ -1.06
NUP50-216ENST00000486184 CSN1S1P47710 185 aa8.42□□□□□ -1.06
NUP50-216ENST00000486184 FGF8P55075 233 aaPredicted RBP8.42□□□□□ -1.06
NUP50-216ENST00000486184 NUTF2P61970 127 aaKnown RBP8.42□□□□□ -1.06
NUP50-216ENST00000486184 HIST1H1AQ02539 215 aaPredicted RBP8.42□□□□□ -1.06
NUP50-216ENST00000486184 ICAM4Q14773 271 aa8.42□□□□□ -1.06
NUP50-216ENST00000486184 ZNF726P1Q15940 193 aa8.42□□□□□ -1.06
NUP50-216ENST00000486184 SSX7Q7RTT5 188 aa8.42□□□□□ -1.06
NUP50-216ENST00000486184 LYPD1Q8N2G4 141 aa8.42□□□□□ -1.06
NUP50-216ENST00000486184 EXOC3-AS1Q8N2X6 119 aa8.42□□□□□ -1.06
NUP50-216ENST00000486184 OR10J6PQ8NGY7 276 aa8.42□□□□□ -1.06
NUP50-216ENST00000486184 CMTM2Q8TAZ6 248 aa8.42□□□□□ -1.06
NUP50-216ENST00000486184 SFT2D1Q8WV19 159 aa8.42□□□□□ -1.06
NUP50-216ENST00000486184 Q9H3A6 140 aa8.42□□□□□ -1.06
NUP50-216ENST00000486184 HLA-DRB4X5D2U9 266 aa8.42□□□□□ -1.06
NUP50-216ENST00000486184 KIR2DL5BA0A0G2JN68 375 aa8.41□□□□□ -1.06
NUP50-216ENST00000486184 KIR2DL5BA0A0G2JPC4 375 aa8.41□□□□□ -1.06
NUP50-216ENST00000486184 A0A0J9YX75 114 aa8.41□□□□□ -1.06
NUP50-216ENST00000486184 F6UB75 175 aa8.41□□□□□ -1.06
NUP50-216ENST00000486184 IGKV3-20P01619 116 aa8.41□□□□□ -1.06
NUP50-216ENST00000486184 FHITP49789 147 aa8.41□□□□□ -1.06
NUP50-216ENST00000486184 SULT1A2P50226 295 aa8.41□□□□□ -1.06
NUP50-216ENST00000486184 DEFB1P60022 68 aa8.41□□□□□ -1.06
NUP50-216ENST00000486184 MORN3Q6PF18 240 aaPredicted RBP8.41□□□□□ -1.06
NUP50-216ENST00000486184 TRPT1Q86TN4 253 aaKnown RBP8.41□□□□□ -1.06
NUP50-216ENST00000486184 KIR2DL5AQ8N109 375 aa8.41□□□□□ -1.06
NUP50-216ENST00000486184 KIR2DL5BQ8NHK3 375 aa8.41□□□□□ -1.06
NUP50-216ENST00000486184 MRPL53Q96EL3 112 aaKnown RBP8.41□□□□□ -1.06
NUP50-216ENST00000486184 ASCL2Q99929 193 aa8.41□□□□□ -1.06
NUP50-216ENST00000486184 A0A1B0GV50 99 aa8.4□□□□□ -1.06
NUP50-216ENST00000486184 ZNF705FA8MVS1 300 aaPredicted RBP8.4□□□□□ -1.06
NUP50-216ENST00000486184 H3BMM0 161 aa8.4□□□□□ -1.06
NUP50-216ENST00000486184 UBE2CO00762 179 aa8.4□□□□□ -1.06
NUP50-216ENST00000486184 HAGHQ16775 308 aa8.4□□□□□ -1.06
NUP50-216ENST00000486184 GDF5OSQ5U4N7 250 aa8.4□□□□□ -1.06
NUP50-216ENST00000486184 ALKAL2Q6UX46 152 aa8.4□□□□□ -1.06
NUP50-216ENST00000486184 OR8A1Q8NGG7 326 aa8.4□□□□□ -1.06
NUP50-216ENST00000486184 RXFP4Q8TDU9 374 aa8.4□□□□□ -1.06
NUP50-216ENST00000486184 CSTL1Q9H114 145 aa8.4□□□□□ -1.06
NUP50-216ENST00000486184 ZMAT4Q9H898 229 aa8.4□□□□□ -1.06
NUP50-216ENST00000486184 OTORQ9NRC9 128 aa8.4□□□□□ -1.06
NUP50-216ENST00000486184 RPH3ALQ9UNE2 315 aa8.4□□□□□ -1.06
NUP50-216ENST00000486184 DNAH3Q8TD57 4116 aa8.4□□□□□ -1.07
NUP50-216ENST00000486184 PGPA6NDG6 321 aa8.39□□□□□ -1.07
NUP50-216ENST00000486184 ZNF705EA8MWA4 302 aaPredicted RBP8.39□□□□□ -1.07
NUP50-216ENST00000486184 M0R3E3 92 aa8.39□□□□□ -1.07
NUP50-216ENST00000486184 CA1P00915 261 aaPredicted RBP8.39□□□□□ -1.07
NUP50-216ENST00000486184 HBE1P02100 147 aa8.39□□□□□ -1.07
NUP50-216ENST00000486184 ZNF705DP0CH99 300 aaPredicted RBP8.39□□□□□ -1.07
NUP50-216ENST00000486184 ZNF705BP0CI00 300 aaPredicted RBP8.39□□□□□ -1.07
NUP50-216ENST00000486184 PPT1P50897 306 aa8.39□□□□□ -1.07
NUP50-216ENST00000486184 CNN1P51911 297 aaKnown RBP8.39□□□□□ -1.07
NUP50-216ENST00000486184 LINC00322Q6ZN03 302 aaPredicted RBP8.39□□□□□ -1.07
NUP50-216ENST00000486184 SBSPONQ8IVN8 264 aa8.39□□□□□ -1.07
NUP50-216ENST00000486184 MBD3L1Q8WWY6 194 aa8.39□□□□□ -1.07
NUP50-216ENST00000486184 SPATA25Q9BR10 227 aa8.39□□□□□ -1.07
NUP50-216ENST00000486184 C1QTNF4Q9BXJ3 329 aa8.39□□□□□ -1.07
NUP50-216ENST00000486184 TMPRSS5Q9H3S3 457 aa8.39□□□□□ -1.07
NUP50-216ENST00000486184 SLC25A5P05141 298 aaKnown RBP8.38□□□□□ -1.07
NUP50-216ENST00000486184 NHLRC4P0CG21 123 aaPredicted RBP8.38□□□□□ -1.07
NUP50-216ENST00000486184 PRB4P10163 310 aaPredicted RBP8.38□□□□□ -1.07
NUP50-216ENST00000486184 UBE2G2P60604 165 aa8.38□□□□□ -1.07
NUP50-216ENST00000486184 TNP2Q05952 138 aa8.38□□□□□ -1.07
NUP50-216ENST00000486184 SUN5Q8TC36 379 aa8.38□□□□□ -1.07
NUP50-216ENST00000486184 NKX6-2Q9C056 277 aaPredicted RBP8.38□□□□□ -1.07
NUP50-216ENST00000486184 A0A1W2PRE2 83 aa8.37□□□□□ -1.07
NUP50-216ENST00000486184 PRAC2D3DTV9 90 aa8.37□□□□□ -1.07
NUP50-216ENST00000486184 K7EQM0 130 aa8.37□□□□□ -1.07
NUP50-216ENST00000486184 IFNA7P01567 189 aa8.37□□□□□ -1.07
NUP50-216ENST00000486184 BLOC1S1P78537 153 aa8.37□□□□□ -1.07
NUP50-216ENST00000486184 DEFB135Q30KP9 77 aa8.37□□□□□ -1.07
NUP50-216ENST00000486184 TMEM78Q5T7P6 136 aa8.37□□□□□ -1.07
NUP50-216ENST00000486184 CST9LP1Q5W188 147 aa8.37□□□□□ -1.07
NUP50-216ENST00000486184 C5orf17Q8NAS9 161 aa8.37□□□□□ -1.07
NUP50-216ENST00000486184 CLUHP3Q96NS8 147 aa8.37□□□□□ -1.07
NUP50-216ENST00000486184 IGKV2-40A0A087WW87 121 aaPredicted RBP8.36□□□□□ -1.07
NUP50-216ENST00000486184 NPIPB6E9PJ23 425 aa8.36□□□□□ -1.07
NUP50-216ENST00000486184 IFNA1P01562 189 aa8.36□□□□□ -1.07
NUP50-216ENST00000486184 IGKV2D-40P01614 121 aaPredicted RBP8.36□□□□□ -1.07
NUP50-216ENST00000486184 AMBPP02760 352 aa8.36□□□□□ -1.07
NUP50-216ENST00000486184 TSPOP30536 169 aa8.36□□□□□ -1.07
NUP50-216ENST00000486184 FXYD7P58549 80 aa8.36□□□□□ -1.07
NUP50-216ENST00000486184 SUMO1P63165 101 aaKnown RBP8.36□□□□□ -1.07
NUP50-216ENST00000486184 Q6ZWC4 215 aa8.36□□□□□ -1.07
NUP50-216ENST00000486184 ARL6IP6Q8N6S5 226 aa8.36□□□□□ -1.07
NUP50-216ENST00000486184 RCHY1Q96PM5 261 aa8.36□□□□□ -1.07
NUP50-216ENST00000486184 SLC35B3Q9H1N7 401 aa8.36□□□□□ -1.07
NUP50-216ENST00000486184 XCL2Q9UBD3 114 aa8.36□□□□□ -1.07
NUP50-216ENST00000486184 ARL2-SNX15V9GYD0 113 aa8.36□□□□□ -1.07
NUP50-216ENST00000486184 TRAV1-1A0A0B4J248 108 aa8.35□□□□□ -1.07
NUP50-216ENST00000486184 SERTM2A0A1B0GWG4 89 aa8.35□□□□□ -1.07
NUP50-216ENST00000486184 RBAKDNA6NC62 111 aa8.35□□□□□ -1.07
NUP50-216ENST00000486184 FAM74A7A6NL05 159 aa8.35□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms