RNA–Protein interactions for RNA: ENST00000485994.5

VPS50-218, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 2

Gene VPS50, Length 573 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-218ENST00000485994 TMEM256Q8N2U0 113 aa5.01□□□□□ -1.61
VPS50-218ENST00000485994 LRRC20Q8TCA0 184 aa5.01□□□□□ -1.61
VPS50-218ENST00000485994 C20orf144Q9BQM9 153 aa5.01□□□□□ -1.61
VPS50-218ENST00000485994 SLC39A9Q9NUM3 307 aa5.01□□□□□ -1.61
VPS50-218ENST00000485994 TMEM14CQ9P0S9 112 aa5.01□□□□□ -1.61
VPS50-218ENST00000485994 DKK2Q9UBU2 259 aa5.01□□□□□ -1.61
VPS50-218ENST00000485994 ALG5Q9Y673 324 aa5.01□□□□□ -1.61
VPS50-218ENST00000485994 PXMP4Q9Y6I8 212 aa5.01□□□□□ -1.61
VPS50-218ENST00000485994 BIRC6Q9NR09 4857 aa5.01□□□□□ -1.61
VPS50-218ENST00000485994 DNAH10Q8IVF4 4471 aa5□□□□□ -1.61
VPS50-218ENST00000485994 H0YIZ8 118 aa5□□□□□ -1.61
VPS50-218ENST00000485994 SIX6O95475 246 aa5□□□□□ -1.61
VPS50-218ENST00000485994 IGKV3-20P01619 116 aa5□□□□□ -1.61
VPS50-218ENST00000485994 CDKN1BP46527 198 aa5□□□□□ -1.61
VPS50-218ENST00000485994 H2BFSP57053 126 aa5□□□□□ -1.61
VPS50-218ENST00000485994 S100A10P60903 97 aa5□□□□□ -1.61
VPS50-218ENST00000485994 FGL1Q08830 312 aa5□□□□□ -1.61
VPS50-218ENST00000485994 RRN3P1Q2M238 152 aa5□□□□□ -1.61
VPS50-218ENST00000485994 RGS21Q2M5E4 152 aa5□□□□□ -1.61
VPS50-218ENST00000485994 MIC13Q5XKP0 118 aa5□□□□□ -1.61
VPS50-218ENST00000485994 Q6ZTC4 211 aa5□□□□□ -1.61
VPS50-218ENST00000485994 RNF182Q8N6D2 247 aa5□□□□□ -1.61
VPS50-218ENST00000485994 ZNF738Q8NE65 137 aa5□□□□□ -1.61
VPS50-218ENST00000485994 RPUSD4Q96CM3 377 aaKnown RBP5□□□□□ -1.61
VPS50-218ENST00000485994 MRPL53Q96EL3 112 aaKnown RBP5□□□□□ -1.61
VPS50-218ENST00000485994 ODF3Q96PU9 254 aa5□□□□□ -1.61
VPS50-218ENST00000485994 CELA1Q9UNI1 258 aa5□□□□□ -1.61
VPS50-218ENST00000485994 PRELID1Q9Y255 219 aa5□□□□□ -1.61
VPS50-218ENST00000485994 IGHV4-4A0A075B6R2 117 aa4.99□□□□□ -1.61
VPS50-218ENST00000485994 DEFB131BA0A096LNP1 70 aa4.99□□□□□ -1.61
VPS50-218ENST00000485994 LYRM9A8MSI8 78 aa4.99□□□□□ -1.61
VPS50-218ENST00000485994 IGLL5B9A064 214 aa4.99□□□□□ -1.61
VPS50-218ENST00000485994 H3BQ15 152 aa4.99□□□□□ -1.61
VPS50-218ENST00000485994 MPC2O95563 127 aa4.99□□□□□ -1.61
VPS50-218ENST00000485994 INSP01308 110 aa4.99□□□□□ -1.61
VPS50-218ENST00000485994 PET100P0DJ07 73 aa4.99□□□□□ -1.61
VPS50-218ENST00000485994 HIST1H1EP10412 219 aaKnown RBP4.99□□□□□ -1.61
VPS50-218ENST00000485994 FGF7P21781 194 aa4.99□□□□□ -1.61
VPS50-218ENST00000485994 FXYD7P58549 80 aa4.99□□□□□ -1.61
VPS50-218ENST00000485994 TAS2R60P59551 318 aa4.99□□□□□ -1.61
VPS50-218ENST00000485994 MORN5Q5VZ52 161 aa4.99□□□□□ -1.61
VPS50-218ENST00000485994 IGFL4Q6B9Z1 124 aa4.99□□□□□ -1.61
VPS50-218ENST00000485994 ZNF493Q6ZR52 646 aa4.99□□□□□ -1.61
VPS50-218ENST00000485994 OR5C1Q8NGR4 320 aa4.99□□□□□ -1.61
VPS50-218ENST00000485994 PPP1R1CQ8WVI7 109 aa4.99□□□□□ -1.61
VPS50-218ENST00000485994 NIPSNAP3BQ9BS92 247 aa4.99□□□□□ -1.61
VPS50-218ENST00000485994 NPCDR1Q9BY65 106 aa4.99□□□□□ -1.61
VPS50-218ENST00000485994 PARD6GQ9BYG4 376 aaPredicted RBP4.99□□□□□ -1.61
VPS50-218ENST00000485994 WDR61Q9GZS3 305 aaKnown RBP4.99□□□□□ -1.61
VPS50-218ENST00000485994 ZNF586Q9NXT0 402 aa4.99□□□□□ -1.61
VPS50-218ENST00000485994 OR5AC2Q9NZP5 309 aa4.99□□□□□ -1.61
VPS50-218ENST00000485994 TRBV19A0A075B6N1 114 aa4.98□□□□□ -1.61
VPS50-218ENST00000485994 TRAV5A0A0B4J249 113 aa4.98□□□□□ -1.61
VPS50-218ENST00000485994 LOC102723971A0A1B0GUV8 181 aa4.98□□□□□ -1.61
VPS50-218ENST00000485994 C17orf112F2Z3M2 114 aa4.98□□□□□ -1.61
VPS50-218ENST00000485994 BOLA2-SMG1P6H3BVE0 249 aa4.98□□□□□ -1.61
VPS50-218ENST00000485994 NMBP08949 121 aa4.98□□□□□ -1.61
VPS50-218ENST00000485994 RHOBP62745 196 aa4.98□□□□□ -1.61
VPS50-218ENST00000485994 HIST1H1AQ02539 215 aaPredicted RBP4.98□□□□□ -1.61
VPS50-218ENST00000485994 FCN2Q15485 313 aa4.98□□□□□ -1.61
VPS50-218ENST00000485994 SPINK13Q1W4C9 94 aa4.98□□□□□ -1.61
VPS50-218ENST00000485994 FAM222AQ5U5X8 452 aa4.98□□□□□ -1.61
VPS50-218ENST00000485994 LYPD1Q8N2G4 141 aa4.98□□□□□ -1.61
VPS50-218ENST00000485994 OR10J6PQ8NGY7 276 aa4.98□□□□□ -1.61
VPS50-218ENST00000485994 FAM167A-AS1Q96KT0 104 aa4.98□□□□□ -1.61
VPS50-218ENST00000485994 LINC00477Q96M19 166 aa4.98□□□□□ -1.61
VPS50-218ENST00000485994 NDUFAF3Q9BU61 184 aa4.98□□□□□ -1.61
VPS50-218ENST00000485994 MRPL32Q9BYC8 188 aaKnown RBP4.98□□□□□ -1.61
VPS50-218ENST00000485994 KCNIP2Q9NS61 270 aa4.98□□□□□ -1.61
VPS50-218ENST00000485994 FRAS1Q86XX4 4008 aa4.98□□□□□ -1.61
VPS50-218ENST00000485994 IGHV3OR16-12A0A075B7B8 117 aa4.97□□□□□ -1.61
VPS50-218ENST00000485994 TRBV7-9A0A0J9YWB2 115 aa4.97□□□□□ -1.61
VPS50-218ENST00000485994 UBE2L5PA0A1B0GUS4 154 aa4.97□□□□□ -1.61
VPS50-218ENST00000485994 PLAC8L1A1L4L8 177 aa4.97□□□□□ -1.61
VPS50-218ENST00000485994 NPIPB6E9PJ23 425 aa4.97□□□□□ -1.61
VPS50-218ENST00000485994 H7BYZ3 331 aa4.97□□□□□ -1.61
VPS50-218ENST00000485994 M0R2Z0 102 aa4.97□□□□□ -1.61
VPS50-218ENST00000485994 SLC17A3O00476 420 aa4.97□□□□□ -1.61
VPS50-218ENST00000485994 SSNA1O43805 119 aa4.97□□□□□ -1.61
VPS50-218ENST00000485994 NDUFB4O95168 129 aa4.97□□□□□ -1.61
VPS50-218ENST00000485994 NBEAP1P0C6P0 100 aa4.97□□□□□ -1.61
VPS50-218ENST00000485994 P0DMU3 169 aa4.97□□□□□ -1.61
VPS50-218ENST00000485994 FAM231AP0DMU4 169 aa4.97□□□□□ -1.61
VPS50-218ENST00000485994 FAM231CP0DMU5 169 aa4.97□□□□□ -1.61
VPS50-218ENST00000485994 RPL12P30050 165 aaKnown RBP4.97□□□□□ -1.61
VPS50-218ENST00000485994 RPP25LQ8N5L8 163 aaKnown RBP4.97□□□□□ -1.61
VPS50-218ENST00000485994 ARL6IP6Q8N6S5 226 aa4.97□□□□□ -1.61
VPS50-218ENST00000485994 ASB13Q8WXK3 278 aa4.97□□□□□ -1.61
VPS50-218ENST00000485994 FAM19A4Q96LR4 140 aa4.97□□□□□ -1.61
VPS50-218ENST00000485994 ATP5SQ99766 215 aa4.97□□□□□ -1.61
VPS50-218ENST00000485994 LINC00467Q9BRT7 94 aa4.97□□□□□ -1.61
VPS50-218ENST00000485994 TMEM208Q9BTX3 173 aa4.97□□□□□ -1.61
VPS50-218ENST00000485994 OR51M1Q9H341 326 aa4.97□□□□□ -1.61
VPS50-218ENST00000485994 PPP1R14DQ9NXH3 145 aa4.97□□□□□ -1.61
VPS50-218ENST00000485994 HSPB11Q9Y547 144 aa4.97□□□□□ -1.61
VPS50-218ENST00000485994 YTHDF2Q9Y5A9 579 aaKnown RBP4.97□□□□□ -1.61
VPS50-218ENST00000485994 DNAH17Q9UFH2 4485 aa4.97□□□□□ -1.61
VPS50-218ENST00000485994 TRAV12-2A0A075B6T6 113 aa4.96□□□□□ -1.62
VPS50-218ENST00000485994 CBY3A6NI87 242 aa4.96□□□□□ -1.62
VPS50-218ENST00000485994 ZNF705GA8MUZ8 300 aaPredicted RBP4.96□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms