RNA–Protein interactions for RNA: ENST00000485921.5

ABCF3-216, Transcript of ATP binding cassette subfamily F member 3, humanhuman

TSL 2

Gene ABCF3, Length 813 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCF3-216ENST00000485921 PLA2G2EQ9NZK7 142 aa17.35■□□□□ 0.37
ABCF3-216ENST00000485921 CTXND1A0A1B0GTU2 59 aa17.34■□□□□ 0.37
ABCF3-216ENST00000485921 CA1P00915 261 aaPredicted RBP17.34■□□□□ 0.37
ABCF3-216ENST00000485921 ZNF705DP0CH99 300 aaPredicted RBP17.34■□□□□ 0.37
ABCF3-216ENST00000485921 ZNF705BP0CI00 300 aaPredicted RBP17.34■□□□□ 0.37
ABCF3-216ENST00000485921 SLC51BQ86UW2 128 aa17.34■□□□□ 0.37
ABCF3-216ENST00000485921 EXOC3-AS1Q8N2X6 119 aa17.34■□□□□ 0.37
ABCF3-216ENST00000485921 TMED6Q8WW62 240 aa17.34■□□□□ 0.37
ABCF3-216ENST00000485921 RETNQ9HD89 108 aa17.34■□□□□ 0.37
ABCF3-216ENST00000485921 UMAD1C9J7I0 102 aa17.33■□□□□ 0.36
ABCF3-216ENST00000485921 DUSP14O95147 198 aaKnown RBP17.33■□□□□ 0.36
ABCF3-216ENST00000485921 CXorf1O96002 111 aa17.33■□□□□ 0.36
ABCF3-216ENST00000485921 NKX2-5P52952 324 aaPredicted RBP17.33■□□□□ 0.36
ABCF3-216ENST00000485921 RANP62826 216 aaKnown RBP17.33■□□□□ 0.36
ABCF3-216ENST00000485921 ICAM4Q14773 271 aa17.33■□□□□ 0.36
ABCF3-216ENST00000485921 Q6ZWC4 215 aa17.33■□□□□ 0.36
ABCF3-216ENST00000485921 OR8A1Q8NGG7 326 aa17.33■□□□□ 0.36
ABCF3-216ENST00000485921 MRPL53Q96EL3 112 aaKnown RBP17.33■□□□□ 0.36
ABCF3-216ENST00000485921 CLUHP3Q96NS8 147 aa17.33■□□□□ 0.36
ABCF3-216ENST00000485921 PRELID1Q9Y255 219 aa17.33■□□□□ 0.36
ABCF3-216ENST00000485921 TGP01266 2768 aa17.33■□□□□ 0.36
ABCF3-216ENST00000485921 PRAC2D3DTV9 90 aa17.32■□□□□ 0.36
ABCF3-216ENST00000485921 GCHFRP30047 84 aa17.32■□□□□ 0.36
ABCF3-216ENST00000485921 CNN1P51911 297 aaKnown RBP17.32■□□□□ 0.36
ABCF3-216ENST00000485921 NUTF2P61970 127 aaKnown RBP17.32■□□□□ 0.36
ABCF3-216ENST00000485921 HIST1H1AQ02539 215 aaPredicted RBP17.32■□□□□ 0.36
ABCF3-216ENST00000485921 DEFB135Q30KP9 77 aa17.32■□□□□ 0.36
ABCF3-216ENST00000485921 M0R3E3 92 aa17.31■□□□□ 0.36
ABCF3-216ENST00000485921 GIG44P09565 113 aaPredicted RBP17.31■□□□□ 0.36
ABCF3-216ENST00000485921 LYPD1Q8N2G4 141 aa17.31■□□□□ 0.36
ABCF3-216ENST00000485921 Q9H3A6 140 aa17.31■□□□□ 0.36
ABCF3-216ENST00000485921 U3KQK5 164 aa17.31■□□□□ 0.36
ABCF3-216ENST00000485921 COL7A1Q02388 2944 aa17.3■□□□□ 0.36
ABCF3-216ENST00000485921 FHITP49789 147 aa17.3■□□□□ 0.36
ABCF3-216ENST00000485921 EIF5AL1Q6IS14 154 aaKnown RBP17.3■□□□□ 0.36
ABCF3-216ENST00000485921 RCHY1Q96PM5 261 aa17.3■□□□□ 0.36
ABCF3-216ENST00000485921 NBEAL2Q6ZNJ1 2754 aa17.29■□□□□ 0.36
ABCF3-216ENST00000485921 A8MTW9 85 aa17.29■□□□□ 0.36
ABCF3-216ENST00000485921 SPRY2O43597 315 aa17.29■□□□□ 0.36
ABCF3-216ENST00000485921 IQCF2Q8IXL9 164 aa17.29■□□□□ 0.36
ABCF3-216ENST00000485921 OR10J6PQ8NGY7 276 aa17.29■□□□□ 0.36
ABCF3-216ENST00000485921 OVOL2Q9BRP0 275 aa17.29■□□□□ 0.36
ABCF3-216ENST00000485921 TMEM167BQ9NRX6 74 aa17.29■□□□□ 0.36
ABCF3-216ENST00000485921 MAP1LC3B2A6NCE7 125 aa17.28■□□□□ 0.36
ABCF3-216ENST00000485921 FXYD7P58549 80 aa17.28■□□□□ 0.36
ABCF3-216ENST00000485921 FAM213BQ8TBF2 198 aa17.28■□□□□ 0.36
ABCF3-216ENST00000485921 SUN5Q8TC36 379 aa17.28■□□□□ 0.36
ABCF3-216ENST00000485921 RNF183Q96D59 192 aa17.28■□□□□ 0.36
ABCF3-216ENST00000485921 MAP1LC3BQ9GZQ8 125 aa17.28■□□□□ 0.36
ABCF3-216ENST00000485921 SLC35B3Q9H1N7 401 aa17.28■□□□□ 0.36
ABCF3-216ENST00000485921 OTORQ9NRC9 128 aa17.28■□□□□ 0.36
ABCF3-216ENST00000485921 TP53TG1Q9Y2A0 90 aa17.28■□□□□ 0.36
ABCF3-216ENST00000485921 FGF8P55075 233 aaPredicted RBP17.27■□□□□ 0.36
ABCF3-216ENST00000485921 AMTNQ6UX39 209 aa17.27■□□□□ 0.36
ABCF3-216ENST00000485921 DPPA3Q6W0C5 159 aa17.27■□□□□ 0.36
ABCF3-216ENST00000485921 XCL2Q9UBD3 114 aa17.27■□□□□ 0.36
ABCF3-216ENST00000485921 C1QTNF4Q9BXJ3 329 aa17.26■□□□□ 0.35
ABCF3-216ENST00000485921 PPP1R14DQ9NXH3 145 aa17.26■□□□□ 0.35
ABCF3-216ENST00000485921 BOLA1Q9Y3E2 137 aa17.26■□□□□ 0.35
ABCF3-216ENST00000485921 PGPA6NDG6 321 aa17.25■□□□□ 0.35
ABCF3-216ENST00000485921 CSN1S1P47710 185 aa17.25■□□□□ 0.35
ABCF3-216ENST00000485921 FAM74A1Q5RGS3 127 aa17.25■□□□□ 0.35
ABCF3-216ENST00000485921 TMPRSS5Q9H3S3 457 aa17.25■□□□□ 0.35
ABCF3-216ENST00000485921 RAB5CP51148 216 aa17.24■□□□□ 0.35
ABCF3-216ENST00000485921 MBD3L1Q8WWY6 194 aa17.24■□□□□ 0.35
ABCF3-216ENST00000485921 NPIPB6E9PJ23 425 aa17.23■□□□□ 0.35
ABCF3-216ENST00000485921 CSNK1G2-AS1Q8NCQ2 148 aa17.23■□□□□ 0.35
ABCF3-216ENST00000485921 RXFP4Q8TDU9 374 aa17.23■□□□□ 0.35
ABCF3-216ENST00000485921 SFT2D1Q8WV19 159 aa17.23■□□□□ 0.35
ABCF3-216ENST00000485921 TENM3Q9P273 2699 aa17.22■□□□□ 0.35
ABCF3-216ENST00000485921 IGKV2-40A0A087WW87 121 aaPredicted RBP17.22■□□□□ 0.35
ABCF3-216ENST00000485921 BOLA2-SMG1P6H3BVE0 249 aa17.22■□□□□ 0.35
ABCF3-216ENST00000485921 M0R2Z0 102 aa17.22■□□□□ 0.35
ABCF3-216ENST00000485921 IGKV2D-40P01614 121 aaPredicted RBP17.22■□□□□ 0.35
ABCF3-216ENST00000485921 SULT1A2P50226 295 aa17.22■□□□□ 0.35
ABCF3-216ENST00000485921 ERCC8Q13216 396 aa17.22■□□□□ 0.35
ABCF3-216ENST00000485921 SPINK13Q1W4C9 94 aa17.22■□□□□ 0.35
ABCF3-216ENST00000485921 CMTM2Q8TAZ6 248 aa17.22■□□□□ 0.35
ABCF3-216ENST00000485921 H2AFB1P0C5Y9 115 aa17.21■□□□□ 0.35
ABCF3-216ENST00000485921 OR11H2Q8NH07 326 aa17.21■□□□□ 0.35
ABCF3-216ENST00000485921 A0A1W2PRE2 83 aa17.2■□□□□ 0.34
ABCF3-216ENST00000485921 DIRC3C9JPN6 131 aa17.2■□□□□ 0.34
ABCF3-216ENST00000485921 AMBPP02760 352 aa17.2■□□□□ 0.34
ABCF3-216ENST00000485921 CT45A10P0DMU9 189 aa17.2■□□□□ 0.34
ABCF3-216ENST00000485921 C9orf47Q6ZRZ4 202 aa17.2■□□□□ 0.34
ABCF3-216ENST00000485921 LINC00477Q96M19 166 aa17.2■□□□□ 0.34
ABCF3-216ENST00000485921 RARRES2Q99969 163 aa17.2■□□□□ 0.34
ABCF3-216ENST00000485921 VGLL1Q99990 258 aa17.2■□□□□ 0.34
ABCF3-216ENST00000485921 AGPAT4-IT1Q9H0P7 198 aa17.2■□□□□ 0.34
ABCF3-216ENST00000485921 A0A1B0GV50 99 aa17.19■□□□□ 0.34
ABCF3-216ENST00000485921 SLC25A5P05141 298 aaKnown RBP17.19■□□□□ 0.34
ABCF3-216ENST00000485921 UBE2G2P60604 165 aa17.19■□□□□ 0.34
ABCF3-216ENST00000485921 SUMO1P63165 101 aaKnown RBP17.19■□□□□ 0.34
ABCF3-216ENST00000485921 ARL6IP6Q8N6S5 226 aa17.19■□□□□ 0.34
ABCF3-216ENST00000485921 RPH3ALQ9UNE2 315 aa17.19■□□□□ 0.34
ABCF3-216ENST00000485921 YTHDF2Q9Y5A9 579 aaKnown RBP17.19■□□□□ 0.34
ABCF3-216ENST00000485921 RBAKDNA6NC62 111 aa17.18■□□□□ 0.34
ABCF3-216ENST00000485921 GGTLC3B5MD39 225 aa17.18■□□□□ 0.34
ABCF3-216ENST00000485921 TMEM78Q5T7P6 136 aa17.18■□□□□ 0.34
ABCF3-216ENST00000485921 IGF2BP2-AS1Q96M15 143 aa17.18■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 67.5 ms