RNA–Protein interactions for RNA: ENST00000485867.5

SMC4-217, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 3

Gene SMC4, Length 629 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-217ENST00000485867 CCNKO75909 580 aa4.26□□□□□ -1.73
SMC4-217ENST00000485867 ATG12O94817 140 aa4.26□□□□□ -1.73
SMC4-217ENST00000485867 FABP1P07148 127 aa4.26□□□□□ -1.73
SMC4-217ENST00000485867 CXCL3P19876 107 aa4.26□□□□□ -1.73
SMC4-217ENST00000485867 GATA2P23769 480 aaPredicted RBP4.26□□□□□ -1.73
SMC4-217ENST00000485867 SRIP30626 198 aa4.26□□□□□ -1.73
SMC4-217ENST00000485867 RND3P61587 244 aa4.26□□□□□ -1.73
SMC4-217ENST00000485867 FGL1Q08830 312 aa4.26□□□□□ -1.73
SMC4-217ENST00000485867 ZNF415Q09FC8 603 aa4.26□□□□□ -1.73
SMC4-217ENST00000485867 SLAQ13239 276 aa4.26□□□□□ -1.73
SMC4-217ENST00000485867 TDRG1Q3Y452 100 aa4.26□□□□□ -1.73
SMC4-217ENST00000485867 LINC01556Q5JQF7 62 aa4.26□□□□□ -1.73
SMC4-217ENST00000485867 NOXA1Q86UR1 476 aa4.26□□□□□ -1.73
SMC4-217ENST00000485867 C10orf67Q8IYJ2 551 aa4.26□□□□□ -1.73
SMC4-217ENST00000485867 OR1B1Q8NGR6 318 aa4.26□□□□□ -1.73
SMC4-217ENST00000485867 GPR82Q96P67 336 aa4.26□□□□□ -1.73
SMC4-217ENST00000485867 PYGO2Q9BRQ0 406 aa4.26□□□□□ -1.73
SMC4-217ENST00000485867 DUSP21Q9H596 190 aa4.26□□□□□ -1.73
SMC4-217ENST00000485867 C8orf4Q9NR00 106 aa4.26□□□□□ -1.73
SMC4-217ENST00000485867 SCN3BQ9NY72 215 aa4.26□□□□□ -1.73
SMC4-217ENST00000485867 CEBPZOSA8MTT3 80 aa4.25□□□□□ -1.73
SMC4-217ENST00000485867 E5RGE8 158 aa4.25□□□□□ -1.73
SMC4-217ENST00000485867 SPINK4O60575 86 aa4.25□□□□□ -1.73
SMC4-217ENST00000485867 TRIM16LQ309B1 348 aa4.25□□□□□ -1.73
SMC4-217ENST00000485867 CCDC190Q86UF4 302 aa4.25□□□□□ -1.73
SMC4-217ENST00000485867 ZNF680Q8NEM1 530 aa4.25□□□□□ -1.73
SMC4-217ENST00000485867 RNASE11Q8TAA1 199 aaKnown RBP4.25□□□□□ -1.73
SMC4-217ENST00000485867 TMEM37Q8WXS4 190 aa4.25□□□□□ -1.73
SMC4-217ENST00000485867 RPUSD4Q96CM3 377 aaKnown RBP4.25□□□□□ -1.73
SMC4-217ENST00000485867 SLC35E1Q96K37 410 aa4.25□□□□□ -1.73
SMC4-217ENST00000485867 TRGV9Q99603 122 aa4.25□□□□□ -1.73
SMC4-217ENST00000485867 VGLL1Q99990 258 aa4.25□□□□□ -1.73
SMC4-217ENST00000485867 PAXXQ9BUH6 204 aa4.25□□□□□ -1.73
SMC4-217ENST00000485867 CTNNBIP1Q9NSA3 81 aaPredicted RBP4.25□□□□□ -1.73
SMC4-217ENST00000485867 HHLA3Q9XRX5 114 aa4.25□□□□□ -1.73
SMC4-217ENST00000485867 IGKV1OR2-108A0A075B7D4 117 aa4.24□□□□□ -1.73
SMC4-217ENST00000485867 TRAV12-3A0A0B4J271 114 aa4.24□□□□□ -1.73
SMC4-217ENST00000485867 C3orf85A0A1B0GTC6 90 aa4.24□□□□□ -1.73
SMC4-217ENST00000485867 RBFOX3A6NFN3 312 aa4.24□□□□□ -1.73
SMC4-217ENST00000485867 J3KRW8 73 aa4.24□□□□□ -1.73
SMC4-217ENST00000485867 PGAM2P15259 253 aa4.24□□□□□ -1.73
SMC4-217ENST00000485867 HLA-DMAP28067 261 aa4.24□□□□□ -1.73
SMC4-217ENST00000485867 TNFSF8P32971 234 aa4.24□□□□□ -1.73
SMC4-217ENST00000485867 TCL1AP56279 114 aa4.24□□□□□ -1.73
SMC4-217ENST00000485867 PIGPP57054 158 aa4.24□□□□□ -1.73
SMC4-217ENST00000485867 KRTAP10-5P60370 271 aa4.24□□□□□ -1.73
SMC4-217ENST00000485867 TSPAN5P62079 268 aa4.24□□□□□ -1.73
SMC4-217ENST00000485867 LAGE3Q14657 143 aa4.24□□□□□ -1.73
SMC4-217ENST00000485867 SP6Q3SY56 376 aa4.24□□□□□ -1.73
SMC4-217ENST00000485867 FAM219AQ8IW50 185 aa4.24□□□□□ -1.73
SMC4-217ENST00000485867 THAP8Q8NA92 274 aa4.24□□□□□ -1.73
SMC4-217ENST00000485867 BLNKQ8WV28 456 aa4.24□□□□□ -1.73
SMC4-217ENST00000485867 PCNPQ8WW12 178 aaKnown RBP4.24□□□□□ -1.73
SMC4-217ENST00000485867 MRPL32Q9BYC8 188 aaKnown RBP4.24□□□□□ -1.73
SMC4-217ENST00000485867 MRPL16Q9NX20 251 aaKnown RBP4.24□□□□□ -1.73
SMC4-217ENST00000485867 CACNG5Q9UF02 275 aa4.24□□□□□ -1.73
SMC4-217ENST00000485867 TPRKBQ9Y3C4 175 aa4.24□□□□□ -1.73
SMC4-217ENST00000485867 KLF12Q9Y4X4 402 aa4.24□□□□□ -1.73
SMC4-217ENST00000485867 TMEM56-RWDD3S4R434 201 aa4.24□□□□□ -1.73
SMC4-217ENST00000485867 MUC2Q02817 5179 aa4.24□□□□□ -1.73
SMC4-217ENST00000485867 A0A087X0K7 114 aa4.23□□□□□ -1.73
SMC4-217ENST00000485867 LINC00854A0A1B0GVQ3 168 aa4.23□□□□□ -1.73
SMC4-217ENST00000485867 H3BRN7 92 aa4.23□□□□□ -1.73
SMC4-217ENST00000485867 GABARAPH6UMI1 98 aa4.23□□□□□ -1.73
SMC4-217ENST00000485867 GABARAPO95166 117 aa4.23□□□□□ -1.73
SMC4-217ENST00000485867 CFDP00746 253 aaPredicted RBP4.23□□□□□ -1.73
SMC4-217ENST00000485867 ORM2P19652 201 aa4.23□□□□□ -1.73
SMC4-217ENST00000485867 RCVRNP35243 200 aa4.23□□□□□ -1.73
SMC4-217ENST00000485867 GPX4P36969 197 aaPredicted RBP4.23□□□□□ -1.73
SMC4-217ENST00000485867 GGNBP1Q5YKI7 109 aa4.23□□□□□ -1.73
SMC4-217ENST00000485867 PRSS48Q7RTY5 328 aa4.23□□□□□ -1.73
SMC4-217ENST00000485867 LHFPL5Q8TAF8 219 aa4.23□□□□□ -1.73
SMC4-217ENST00000485867 ZNF486Q96H40 463 aaPredicted RBP4.23□□□□□ -1.73
SMC4-217ENST00000485867 TXNDC17Q9BRA2 123 aa4.23□□□□□ -1.73
SMC4-217ENST00000485867 TMEM147Q9BVK8 224 aa4.23□□□□□ -1.73
SMC4-217ENST00000485867 TXNL4BQ9NX01 149 aaKnown RBP4.23□□□□□ -1.73
SMC4-217ENST00000485867 U3KQ87 197 aa4.23□□□□□ -1.73
SMC4-217ENST00000485867 TRGV4A0A0C4DH28 118 aa4.22□□□□□ -1.73
SMC4-217ENST00000485867 PRAC2D3DTV9 90 aa4.22□□□□□ -1.73
SMC4-217ENST00000485867 IGHV3-30P01768 117 aa4.22□□□□□ -1.73
SMC4-217ENST00000485867 IGHV3-33P01772 117 aa4.22□□□□□ -1.73
SMC4-217ENST00000485867 ORM1P02763 201 aa4.22□□□□□ -1.73
SMC4-217ENST00000485867 PRSS2P07478 247 aa4.22□□□□□ -1.73
SMC4-217ENST00000485867 IGHV3-30-3P0DP02 117 aa4.22□□□□□ -1.73
SMC4-217ENST00000485867 IGHV3-30-5P0DP03 117 aa4.22□□□□□ -1.73
SMC4-217ENST00000485867 RPL7P18124 248 aaKnown RBP4.22□□□□□ -1.73
SMC4-217ENST00000485867 SDC2P34741 201 aa4.22□□□□□ -1.73
SMC4-217ENST00000485867 MXD1Q05195 221 aa4.22□□□□□ -1.73
SMC4-217ENST00000485867 ZNF846Q147U1 533 aa4.22□□□□□ -1.73
SMC4-217ENST00000485867 MEF2DQ14814 521 aa4.22□□□□□ -1.73
SMC4-217ENST00000485867 IBA57Q5T440 356 aaKnown RBP4.22□□□□□ -1.73
SMC4-217ENST00000485867 LGI3Q8N145 548 aa4.22□□□□□ -1.73
SMC4-217ENST00000485867 ZNF431Q8TF32 576 aaPredicted RBP4.22□□□□□ -1.73
SMC4-217ENST00000485867 BAALCQ8WXS3 180 aa4.22□□□□□ -1.73
SMC4-217ENST00000485867 SHANK2-AS3Q9BTD1 123 aa4.22□□□□□ -1.73
SMC4-217ENST00000485867 LOC100131303A0A0U1RQF7 123 aa4.21□□□□□ -1.74
SMC4-217ENST00000485867 A0A0U1RQV1 116 aa4.21□□□□□ -1.74
SMC4-217ENST00000485867 CDS2O95674 445 aa4.21□□□□□ -1.74
SMC4-217ENST00000485867 SFTA3P0C7M3 94 aa4.21□□□□□ -1.74
SMC4-217ENST00000485867 S100A7P31151 101 aa4.21□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 50.1 ms