RNA–Protein interactions for RNA: ENST00000485749.1

RTN4-213, Transcript of reticulon 4, humanhuman

TSL 2

Gene RTN4, Length 832 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4-213ENST00000485749 TP73-AS1Q9UF72 201 aa3.33□□□□□ -1.88
RTN4-213ENST00000485749 LOC285556D6RIA3 1793 aa3.33□□□□□ -1.88
RTN4-213ENST00000485749 ZNF646O15015 1829 aaPredicted RBP3.33□□□□□ -1.88
RTN4-213ENST00000485749 VWA8A3KMH1 1905 aa3.32□□□□□ -1.88
RTN4-213ENST00000485749 MYH9P35579 1960 aaKnown RBP3.32□□□□□ -1.88
RTN4-213ENST00000485749 IGKV1D-43A0A0B4J1Z2 117 aa3.32□□□□□ -1.88
RTN4-213ENST00000485749 C7orf66A4D0T2 115 aa3.32□□□□□ -1.88
RTN4-213ENST00000485749 PMS2P5A8MQ11 134 aa3.32□□□□□ -1.88
RTN4-213ENST00000485749 LOC730098B7Z3J9 87 aa3.32□□□□□ -1.88
RTN4-213ENST00000485749 K7ERJ3 54 aa3.32□□□□□ -1.88
RTN4-213ENST00000485749 HYPMO75409 117 aa3.32□□□□□ -1.88
RTN4-213ENST00000485749 CPSF4O95639 269 aaKnown RBP3.32□□□□□ -1.88
RTN4-213ENST00000485749 CGAP01215 116 aa3.32□□□□□ -1.88
RTN4-213ENST00000485749 IGHV3-48P01763 117 aa3.32□□□□□ -1.88
RTN4-213ENST00000485749 PIRTP0C851 137 aa3.32□□□□□ -1.88
RTN4-213ENST00000485749 COX6A1P12074 109 aa3.32□□□□□ -1.88
RTN4-213ENST00000485749 ATP5EP56381 51 aaPredicted RBP3.32□□□□□ -1.88
RTN4-213ENST00000485749 GNB2P62879 340 aa3.32□□□□□ -1.88
RTN4-213ENST00000485749 CCL14Q16627 93 aa3.32□□□□□ -1.88
RTN4-213ENST00000485749 SPATA45Q537H7 98 aa3.32□□□□□ -1.88
RTN4-213ENST00000485749 LGALS9CQ6DKI2 356 aa3.32□□□□□ -1.88
RTN4-213ENST00000485749 KRTAP5-11Q6L8G4 156 aa3.32□□□□□ -1.88
RTN4-213ENST00000485749 Q6ZRP5 223 aa3.32□□□□□ -1.88
RTN4-213ENST00000485749 GPHB5Q86YW7 130 aa3.32□□□□□ -1.88
RTN4-213ENST00000485749 ZNF645Q8N7E2 425 aa3.32□□□□□ -1.88
RTN4-213ENST00000485749 NPCDR1Q9BY65 106 aa3.32□□□□□ -1.88
RTN4-213ENST00000485749 SLC35B3Q9H1N7 401 aa3.32□□□□□ -1.88
RTN4-213ENST00000485749 SMDT1Q9H4I9 107 aa3.32□□□□□ -1.88
RTN4-213ENST00000485749 ZNF286AQ9HBT8 521 aa3.32□□□□□ -1.88
RTN4-213ENST00000485749 BCL2L10Q9HD36 194 aa3.32□□□□□ -1.88
RTN4-213ENST00000485749 IL36BQ9NZH7 164 aa3.32□□□□□ -1.88
RTN4-213ENST00000485749 ZNF492Q9P255 531 aa3.32□□□□□ -1.88
RTN4-213ENST00000485749 ZNF222Q9UK12 451 aa3.32□□□□□ -1.88
RTN4-213ENST00000485749 LSM2Q9Y333 95 aaKnown RBP3.32□□□□□ -1.88
RTN4-213ENST00000485749 F11RQ9Y624 299 aaKnown RBP3.32□□□□□ -1.88
RTN4-213ENST00000485749 BRCA1P38398 1863 aaKnown RBP3.32□□□□□ -1.88
RTN4-213ENST00000485749 TANC1Q9C0D5 1861 aa3.32□□□□□ -1.88
RTN4-213ENST00000485749 SCN9AQ15858 1988 aa3.32□□□□□ -1.88
RTN4-213ENST00000485749 DOCK1Q14185 1865 aa3.31□□□□□ -1.88
RTN4-213ENST00000485749 COL4A4P53420 1690 aaPredicted RBP3.31□□□□□ -1.88
RTN4-213ENST00000485749 A0A087WWC5 75 aa3.31□□□□□ -1.88
RTN4-213ENST00000485749 HMSDA8MTL9 139 aa3.31□□□□□ -1.88
RTN4-213ENST00000485749 C9JCJ5 164 aa3.31□□□□□ -1.88
RTN4-213ENST00000485749 BUB1B-PAK6H3BSN5 160 aa3.31□□□□□ -1.88
RTN4-213ENST00000485749 BMPR1BO00238 502 aa3.31□□□□□ -1.88
RTN4-213ENST00000485749 NTN3O00634 580 aaPredicted RBP3.31□□□□□ -1.88
RTN4-213ENST00000485749 OR1I1O60431 355 aa3.31□□□□□ -1.88
RTN4-213ENST00000485749 ZNF253O75346 499 aa3.31□□□□□ -1.88
RTN4-213ENST00000485749 SLC25A14O95258 325 aaPredicted RBP3.31□□□□□ -1.88
RTN4-213ENST00000485749 SOD1P00441 154 aa3.31□□□□□ -1.88
RTN4-213ENST00000485749 CHTF8P0CG12 524 aa3.31□□□□□ -1.88
RTN4-213ENST00000485749 UBE2AP49459 152 aa3.31□□□□□ -1.88
RTN4-213ENST00000485749 ZNF136P52737 540 aa3.31□□□□□ -1.88
RTN4-213ENST00000485749 CRISP3P54108 245 aa3.31□□□□□ -1.88
RTN4-213ENST00000485749 PCBD1P61457 104 aa3.31□□□□□ -1.88
RTN4-213ENST00000485749 PMCHL1Q16048 86 aa3.31□□□□□ -1.88
RTN4-213ENST00000485749 LINC00303Q3SY05 128 aa3.31□□□□□ -1.88
RTN4-213ENST00000485749 ZNF876PQ49A33 203 aa3.31□□□□□ -1.88
RTN4-213ENST00000485749 SPRNQ5BIV9 151 aa3.31□□□□□ -1.88
RTN4-213ENST00000485749 LCE1EQ5T753 118 aa3.31□□□□□ -1.88
RTN4-213ENST00000485749 C12orf73Q69YU5 71 aa3.31□□□□□ -1.88
RTN4-213ENST00000485749 C7orf65Q6ZTY9 151 aa3.31□□□□□ -1.88
RTN4-213ENST00000485749 SMIM29Q86T20 159 aa3.31□□□□□ -1.88
RTN4-213ENST00000485749 CSNK1G2-AS1Q8NCQ2 148 aa3.31□□□□□ -1.88
RTN4-213ENST00000485749 PPDPFLQ8WWR9 84 aa3.31□□□□□ -1.88
RTN4-213ENST00000485749 CXCL16Q9H2A7 254 aa3.31□□□□□ -1.88
RTN4-213ENST00000485749 OSTCQ9NRP0 149 aa3.31□□□□□ -1.88
RTN4-213ENST00000485749 ZSWIM8A7E2V4 1837 aa3.3□□□□□ -1.88
RTN4-213ENST00000485749 IGHV4-30-2A0A087WSY4 118 aa3.3□□□□□ -1.88
RTN4-213ENST00000485749 A0A1W2PPM0 123 aa3.3□□□□□ -1.88
RTN4-213ENST00000485749 C7orf77A4D0Y5 90 aa3.3□□□□□ -1.88
RTN4-213ENST00000485749 RBAKDNA6NC62 111 aa3.3□□□□□ -1.88
RTN4-213ENST00000485749 ZNF736B4DX44 427 aaPredicted RBP3.3□□□□□ -1.88
RTN4-213ENST00000485749 ADCYAP1P18509 176 aa3.3□□□□□ -1.88
RTN4-213ENST00000485749 NFYAP23511 347 aaPredicted RBP3.3□□□□□ -1.88
RTN4-213ENST00000485749 FAUP35544 74 aaKnown RBP3.3□□□□□ -1.88
RTN4-213ENST00000485749 HIST1H4AP62805 103 aaKnown RBP3.3□□□□□ -1.88
RTN4-213ENST00000485749 LINC01554Q52M75 96 aa3.3□□□□□ -1.88
RTN4-213ENST00000485749 BVES-AS1Q5T3Y7 98 aa3.3□□□□□ -1.88
RTN4-213ENST00000485749 CLECL1Q8IZS7 167 aa3.3□□□□□ -1.88
RTN4-213ENST00000485749 CD177Q8N6Q3 437 aa3.3□□□□□ -1.88
RTN4-213ENST00000485749 C15orf53Q8NAA6 179 aa3.3□□□□□ -1.88
RTN4-213ENST00000485749 FAM213BQ8TBF2 198 aa3.3□□□□□ -1.88
RTN4-213ENST00000485749 MGST2Q99735 147 aa3.3□□□□□ -1.88
RTN4-213ENST00000485749 OPRPNQ99935 248 aaPredicted RBP3.3□□□□□ -1.88
RTN4-213ENST00000485749 OCR1Q9BZK8 76 aa3.3□□□□□ -1.88
RTN4-213ENST00000485749 LINC00597Q9H2U6 94 aa3.3□□□□□ -1.88
RTN4-213ENST00000485749 C16orf95Q9H693 158 aa3.3□□□□□ -1.88
RTN4-213ENST00000485749 RALGAPA2Q2PPJ7 1873 aa3.3□□□□□ -1.88
RTN4-213ENST00000485749 PLXNA1Q9UIW2 1896 aa3.3□□□□□ -1.88
RTN4-213ENST00000485749 ANK1P16157 1881 aa3.29□□□□□ -1.88
RTN4-213ENST00000485749 TSC2P49815 1807 aa3.29□□□□□ -1.88
RTN4-213ENST00000485749 A0A0D9SEW6 157 aa3.29□□□□□ -1.88
RTN4-213ENST00000485749 LOC107986453A0A1B0GWG9 222 aa3.29□□□□□ -1.88
RTN4-213ENST00000485749 NAP1L6A6NFF2 107 aa3.29□□□□□ -1.88
RTN4-213ENST00000485749 A8MWL6 223 aa3.29□□□□□ -1.88
RTN4-213ENST00000485749 ATOX1O00244 68 aa3.29□□□□□ -1.88
RTN4-213ENST00000485749 ZNF688P0C7X2 276 aa3.29□□□□□ -1.88
RTN4-213ENST00000485749 HLA-DMBP28068 263 aa3.29□□□□□ -1.88
RTN4-213ENST00000485749 LINC01547P58512 204 aaPredicted RBP3.29□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 55.8 ms