RNA–Protein interactions for RNA: ENST00000485645.5

SMC4-216, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 5

Gene SMC4, Length 583 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-216ENST00000485645 C1orf134Q5TEV5 83 aa12.06□□□□□ -0.48
SMC4-216ENST00000485645 MGST2Q99735 147 aa12.06□□□□□ -0.48
SMC4-216ENST00000485645 TIMM8BQ9Y5J9 83 aaPredicted RBP12.06□□□□□ -0.48
SMC4-216ENST00000485645 NUDT3O95989 172 aa12.05□□□□□ -0.48
SMC4-216ENST00000485645 PVALBP20472 110 aaPredicted RBP12.05□□□□□ -0.48
SMC4-216ENST00000485645 RAB32Q13637 225 aa12.05□□□□□ -0.48
SMC4-216ENST00000485645 C10orf113Q5VZT2 155 aa12.05□□□□□ -0.48
SMC4-216ENST00000485645 ZNF493Q6ZR52 646 aa12.05□□□□□ -0.48
SMC4-216ENST00000485645 TMEM37Q8WXS4 190 aa12.05□□□□□ -0.48
SMC4-216ENST00000485645 H7BYZ3 331 aa12.04□□□□□ -0.48
SMC4-216ENST00000485645 CAMLGP49069 296 aa12.04□□□□□ -0.48
SMC4-216ENST00000485645 BCAP31P51572 246 aa12.04□□□□□ -0.48
SMC4-216ENST00000485645 CAV2P51636 162 aa12.04□□□□□ -0.48
SMC4-216ENST00000485645 S100A10P60903 97 aa12.04□□□□□ -0.48
SMC4-216ENST00000485645 RAB31Q13636 194 aa12.04□□□□□ -0.48
SMC4-216ENST00000485645 OR10J6PQ8NGY7 276 aa12.04□□□□□ -0.48
SMC4-216ENST00000485645 C20orf144Q9BQM9 153 aa12.04□□□□□ -0.48
SMC4-216ENST00000485645 SIX6O95475 246 aa12.03□□□□□ -0.48
SMC4-216ENST00000485645 OPCMLQ14982 345 aa12.03□□□□□ -0.48
SMC4-216ENST00000485645 MORN5Q5VZ52 161 aa12.03□□□□□ -0.48
SMC4-216ENST00000485645 Q6ZRG5 221 aa12.03□□□□□ -0.48
SMC4-216ENST00000485645 TMEM263Q8WUH6 116 aaKnown RBP12.03□□□□□ -0.48
SMC4-216ENST00000485645 DNAJC4Q9NNZ3 241 aa12.03□□□□□ -0.48
SMC4-216ENST00000485645 NOP10Q9NPE3 64 aaKnown RBP12.03□□□□□ -0.48
SMC4-216ENST00000485645 LYRM2Q9NU23 88 aaPredicted RBP12.03□□□□□ -0.48
SMC4-216ENST00000485645 FAM24AA6NFZ4 105 aa12.02□□□□□ -0.49
SMC4-216ENST00000485645 H3BTX0 84 aa12.02□□□□□ -0.49
SMC4-216ENST00000485645 SLC17A3O00476 420 aa12.02□□□□□ -0.49
SMC4-216ENST00000485645 CCL18P55774 89 aa12.02□□□□□ -0.49
SMC4-216ENST00000485645 RNASE8Q8TDE3 154 aaKnown RBP12.02□□□□□ -0.49
SMC4-216ENST00000485645 NMES1Q9C002 83 aa12.02□□□□□ -0.49
SMC4-216ENST00000485645 PXMP4Q9Y6I8 212 aa12.02□□□□□ -0.49
SMC4-216ENST00000485645 PRAC2D3DTV9 90 aa12.01□□□□□ -0.49
SMC4-216ENST00000485645 CST7O76096 145 aa12.01□□□□□ -0.49
SMC4-216ENST00000485645 IGLC2P0DOY2 106 aa12.01□□□□□ -0.49
SMC4-216ENST00000485645 CYCSP99999 105 aaKnown RBP12.01□□□□□ -0.49
SMC4-216ENST00000485645 KIR3DS1Q14943 382 aa12.01□□□□□ -0.49
SMC4-216ENST00000485645 MIC13Q5XKP0 118 aa12.01□□□□□ -0.49
SMC4-216ENST00000485645 CCDC28AQ8IWP9 274 aa12.01□□□□□ -0.49
SMC4-216ENST00000485645 OR1L4Q8NGR5 311 aa12.01□□□□□ -0.49
SMC4-216ENST00000485645 ZNRF2Q8NHG8 242 aa12.01□□□□□ -0.49
SMC4-216ENST00000485645 SAT2Q96F10 170 aaPredicted RBP12.01□□□□□ -0.49
SMC4-216ENST00000485645 PARD6GQ9BYG4 376 aaPredicted RBP12.01□□□□□ -0.49
SMC4-216ENST00000485645 UQCC1Q9NVA1 299 aa12.01□□□□□ -0.49
SMC4-216ENST00000485645 MUC4Q99102 2169 aa12.01□□□□□ -0.49
SMC4-216ENST00000485645 H3BQ15 152 aa12□□□□□ -0.49
SMC4-216ENST00000485645 SSNA1O43805 119 aa12□□□□□ -0.49
SMC4-216ENST00000485645 SULT1A1P50225 295 aa12□□□□□ -0.49
SMC4-216ENST00000485645 GUK1Q16774 197 aa12□□□□□ -0.49
SMC4-216ENST00000485645 GFI1BQ5VTD9 330 aa12□□□□□ -0.49
SMC4-216ENST00000485645 DMRTA1Q5VZB9 504 aa12□□□□□ -0.49
SMC4-216ENST00000485645 TMEM252Q8N6L7 170 aa12□□□□□ -0.49
SMC4-216ENST00000485645 RNF141Q8WVD5 230 aa12□□□□□ -0.49
SMC4-216ENST00000485645 TRAV5A0A0B4J249 113 aa11.99□□□□□ -0.49
SMC4-216ENST00000485645 NBDYA0A0U1RRE5 68 aa11.99□□□□□ -0.49
SMC4-216ENST00000485645 IGSF23A1L1A6 192 aa11.99□□□□□ -0.49
SMC4-216ENST00000485645 PTTG1O95997 202 aa11.99□□□□□ -0.49
SMC4-216ENST00000485645 RLN2P04090 185 aa11.99□□□□□ -0.49
SMC4-216ENST00000485645 S100A11P31949 105 aa11.99□□□□□ -0.49
SMC4-216ENST00000485645 H2BFSP57053 126 aa11.99□□□□□ -0.49
SMC4-216ENST00000485645 CLINT1Q14677 625 aa11.99□□□□□ -0.49
SMC4-216ENST00000485645 STX12Q86Y82 276 aa11.99□□□□□ -0.49
SMC4-216ENST00000485645 PFDN5Q99471 154 aa11.99□□□□□ -0.49
SMC4-216ENST00000485645 WDR83OSQ9Y284 106 aa11.99□□□□□ -0.49
SMC4-216ENST00000485645 LEPP41159 167 aa11.98□□□□□ -0.49
SMC4-216ENST00000485645 RPL29P47914 159 aaKnown RBP11.98□□□□□ -0.49
SMC4-216ENST00000485645 HBG1P69891 147 aa11.98□□□□□ -0.49
SMC4-216ENST00000485645 HBG2P69892 147 aa11.98□□□□□ -0.49
SMC4-216ENST00000485645 OR5I1Q13606 314 aa11.98□□□□□ -0.49
SMC4-216ENST00000485645 VWC2Q2TAL6 325 aa11.98□□□□□ -0.49
SMC4-216ENST00000485645 LINC00588Q9Y4M8 146 aa11.98□□□□□ -0.49
SMC4-216ENST00000485645 SNURFLB1AK76 121 aa11.97□□□□□ -0.49
SMC4-216ENST00000485645 E5RGE8 158 aa11.97□□□□□ -0.49
SMC4-216ENST00000485645 J3KRW8 73 aa11.97□□□□□ -0.49
SMC4-216ENST00000485645 CT45A10P0DMU9 189 aa11.97□□□□□ -0.49
SMC4-216ENST00000485645 BAXQ07812 192 aa11.97□□□□□ -0.49
SMC4-216ENST00000485645 LRRC37A5PQ49AS3 106 aa11.97□□□□□ -0.49
SMC4-216ENST00000485645 ZNF575Q86XF7 245 aa11.97□□□□□ -0.49
SMC4-216ENST00000485645 C6orf223Q8N319 242 aa11.97□□□□□ -0.49
SMC4-216ENST00000485645 ODF3Q96PU9 254 aa11.97□□□□□ -0.49
SMC4-216ENST00000485645 SLC39A9Q9NUM3 307 aa11.97□□□□□ -0.49
SMC4-216ENST00000485645 ZNF586Q9NXT0 402 aa11.97□□□□□ -0.49
SMC4-216ENST00000485645 TRAV12-3A0A0B4J271 114 aa11.96□□□□□ -0.49
SMC4-216ENST00000485645 UBE2L5PA0A1B0GUS4 154 aa11.96□□□□□ -0.49
SMC4-216ENST00000485645 GAGE12BA1L429 117 aa11.96□□□□□ -0.49
SMC4-216ENST00000485645 NPIPB6E9PJ23 425 aa11.96□□□□□ -0.49
SMC4-216ENST00000485645 H0YIZ8 118 aa11.96□□□□□ -0.49
SMC4-216ENST00000485645 ZNF253O75346 499 aa11.96□□□□□ -0.49
SMC4-216ENST00000485645 GAGE7O76087 117 aa11.96□□□□□ -0.49
SMC4-216ENST00000485645 GAGE12FP0CL80 117 aa11.96□□□□□ -0.49
SMC4-216ENST00000485645 GAGE12GP0CL81 117 aa11.96□□□□□ -0.49
SMC4-216ENST00000485645 GAGE12IP0CL82 117 aa11.96□□□□□ -0.49
SMC4-216ENST00000485645 ATP6V1FQ16864 119 aa11.96□□□□□ -0.49
SMC4-216ENST00000485645 SSX7Q7RTT5 188 aa11.96□□□□□ -0.49
SMC4-216ENST00000485645 LINC00612Q8N6U2 182 aa11.96□□□□□ -0.49
SMC4-216ENST00000485645 PPP1R1CQ8WVI7 109 aa11.96□□□□□ -0.49
SMC4-216ENST00000485645 GNPNAT1Q96EK6 184 aaPredicted RBP11.96□□□□□ -0.49
SMC4-216ENST00000485645 SLC25A31Q9H0C2 315 aa11.96□□□□□ -0.49
SMC4-216ENST00000485645 OR5AC2Q9NZP5 309 aa11.96□□□□□ -0.49
SMC4-216ENST00000485645 RYR1P21817 5038 aa11.96□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 61.2 ms