RNA–Protein interactions for RNA: ENST00000485592.5

SMARCD3-211, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 3, humanhuman

TSL 3

Gene SMARCD3, Length 820 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD3-211ENST00000485592 CXCL3P19876 107 aa9.56□□□□□ -0.88
SMARCD3-211ENST00000485592 CDKN1BP46527 198 aa9.56□□□□□ -0.88
SMARCD3-211ENST00000485592 RRAS2P62070 204 aaPredicted RBP9.56□□□□□ -0.88
SMARCD3-211ENST00000485592 CYP2G1PQ6ZSU1 146 aa9.56□□□□□ -0.88
SMARCD3-211ENST00000485592 SHANK2-AS3Q9BTD1 123 aa9.56□□□□□ -0.88
SMARCD3-211ENST00000485592 LYRM2Q9NU23 88 aaPredicted RBP9.56□□□□□ -0.88
SMARCD3-211ENST00000485592 TRAV26-1A0A087WT03 109 aa9.55□□□□□ -0.88
SMARCD3-211ENST00000485592 A0A087X0K7 114 aa9.55□□□□□ -0.88
SMARCD3-211ENST00000485592 A0A1W2PPQ1 181 aa9.55□□□□□ -0.88
SMARCD3-211ENST00000485592 FNDC10F2Z333 226 aa9.55□□□□□ -0.88
SMARCD3-211ENST00000485592 H7BYZ3 331 aa9.55□□□□□ -0.88
SMARCD3-211ENST00000485592 SSNA1O43805 119 aa9.55□□□□□ -0.88
SMARCD3-211ENST00000485592 OR5G3P0C626 314 aa9.55□□□□□ -0.88
SMARCD3-211ENST00000485592 BTF3P20290 206 aaKnown RBP9.55□□□□□ -0.88
SMARCD3-211ENST00000485592 M6PRP20645 277 aa9.55□□□□□ -0.88
SMARCD3-211ENST00000485592 CAV2P51636 162 aa9.55□□□□□ -0.88
SMARCD3-211ENST00000485592 PSG3Q16557 428 aa9.55□□□□□ -0.88
SMARCD3-211ENST00000485592 RNASE8Q8TDE3 154 aaKnown RBP9.55□□□□□ -0.88
SMARCD3-211ENST00000485592 RXFP4Q8TDU9 374 aa9.55□□□□□ -0.88
SMARCD3-211ENST00000485592 ZNF503Q96F45 646 aa9.55□□□□□ -0.88
SMARCD3-211ENST00000485592 UPK3BQ9BT76 320 aa9.55□□□□□ -0.88
SMARCD3-211ENST00000485592 OR5AC2Q9NZP5 309 aa9.55□□□□□ -0.88
SMARCD3-211ENST00000485592 MGAT4CQ9UBM8 478 aa9.55□□□□□ -0.88
SMARCD3-211ENST00000485592 L7N2F9 121 aa9.54□□□□□ -0.88
SMARCD3-211ENST00000485592 HYPMO75409 117 aa9.54□□□□□ -0.88
SMARCD3-211ENST00000485592 CST7O76096 145 aa9.54□□□□□ -0.88
SMARCD3-211ENST00000485592 LINC00869P0C866 280 aa9.54□□□□□ -0.88
SMARCD3-211ENST00000485592 KRTAP10-2P60368 255 aa9.54□□□□□ -0.88
SMARCD3-211ENST00000485592 VAMP2P63027 116 aa9.54□□□□□ -0.88
SMARCD3-211ENST00000485592 LRRC37A5PQ49AS3 106 aa9.54□□□□□ -0.88
SMARCD3-211ENST00000485592 CCDC28AQ8IWP9 274 aa9.54□□□□□ -0.88
SMARCD3-211ENST00000485592 TMEM252Q8N6L7 170 aa9.54□□□□□ -0.88
SMARCD3-211ENST00000485592 OR10P1Q8NGE3 313 aa9.54□□□□□ -0.88
SMARCD3-211ENST00000485592 UHRF2Q96PU4 802 aa9.54□□□□□ -0.88
SMARCD3-211ENST00000485592 C20orf144Q9BQM9 153 aa9.54□□□□□ -0.88
SMARCD3-211ENST00000485592 KRTAP1-5Q9BYS1 174 aa9.54□□□□□ -0.88
SMARCD3-211ENST00000485592 RNF24Q9Y225 148 aa9.54□□□□□ -0.88
SMARCD3-211ENST00000485592 A0A0J9YY99 117 aa9.53□□□□□ -0.88
SMARCD3-211ENST00000485592 RLN2P04090 185 aa9.53□□□□□ -0.88
SMARCD3-211ENST00000485592 SULT1A1P50225 295 aa9.53□□□□□ -0.88
SMARCD3-211ENST00000485592 SELENOTP62341 195 aa9.53□□□□□ -0.88
SMARCD3-211ENST00000485592 SLC38A11Q08AI6 406 aa9.53□□□□□ -0.88
SMARCD3-211ENST00000485592 RGS21Q2M5E4 152 aa9.53□□□□□ -0.88
SMARCD3-211ENST00000485592 VWC2Q2TAL6 325 aa9.53□□□□□ -0.88
SMARCD3-211ENST00000485592 PPP1R1CQ8WVI7 109 aa9.53□□□□□ -0.88
SMARCD3-211ENST00000485592 RPUSD4Q96CM3 377 aaKnown RBP9.53□□□□□ -0.88
SMARCD3-211ENST00000485592 GGACTQ9BVM4 153 aa9.53□□□□□ -0.88
SMARCD3-211ENST00000485592 APOBP04114 4563 aaKnown RBP9.52□□□□□ -0.88
SMARCD3-211ENST00000485592 SNURFLB1AK76 121 aa9.52□□□□□ -0.89
SMARCD3-211ENST00000485592 MPC2O95563 127 aa9.52□□□□□ -0.89
SMARCD3-211ENST00000485592 CXCL2P19875 107 aa9.52□□□□□ -0.89
SMARCD3-211ENST00000485592 PVALBP20472 110 aaPredicted RBP9.52□□□□□ -0.89
SMARCD3-211ENST00000485592 BCAP31P51572 246 aa9.52□□□□□ -0.89
SMARCD3-211ENST00000485592 PLP1P60201 277 aa9.52□□□□□ -0.89
SMARCD3-211ENST00000485592 MGST2Q99735 147 aa9.52□□□□□ -0.89
SMARCD3-211ENST00000485592 MRPS16Q9Y3D3 137 aaKnown RBP9.52□□□□□ -0.89
SMARCD3-211ENST00000485592 GAGE12BA1L429 117 aa9.51□□□□□ -0.89
SMARCD3-211ENST00000485592 EPM2AB3EWF7 344 aa9.51□□□□□ -0.89
SMARCD3-211ENST00000485592 H3BNG1 76 aa9.51□□□□□ -0.89
SMARCD3-211ENST00000485592 GAGE7O76087 117 aa9.51□□□□□ -0.89
SMARCD3-211ENST00000485592 GAGE12FP0CL80 117 aa9.51□□□□□ -0.89
SMARCD3-211ENST00000485592 GAGE12GP0CL81 117 aa9.51□□□□□ -0.89
SMARCD3-211ENST00000485592 GAGE12IP0CL82 117 aa9.51□□□□□ -0.89
SMARCD3-211ENST00000485592 PRB4P10163 310 aaPredicted RBP9.51□□□□□ -0.89
SMARCD3-211ENST00000485592 CYCSP99999 105 aaKnown RBP9.51□□□□□ -0.89
SMARCD3-211ENST00000485592 ESRGQ1W209 222 aa9.51□□□□□ -0.89
SMARCD3-211ENST00000485592 LCN15Q6UWW0 184 aa9.51□□□□□ -0.89
SMARCD3-211ENST00000485592 LINC00612Q8N6U2 182 aa9.51□□□□□ -0.89
SMARCD3-211ENST00000485592 SLC50A1Q9BRV3 221 aa9.51□□□□□ -0.89
SMARCD3-211ENST00000485592 ARL6Q9H0F7 186 aa9.51□□□□□ -0.89
SMARCD3-211ENST00000485592 NPVFQ9HCQ7 196 aa9.51□□□□□ -0.89
SMARCD3-211ENST00000485592 ZNF586Q9NXT0 402 aa9.51□□□□□ -0.89
SMARCD3-211ENST00000485592 E5RGE8 158 aa9.5□□□□□ -0.89
SMARCD3-211ENST00000485592 HOXA5P20719 270 aa9.5□□□□□ -0.89
SMARCD3-211ENST00000485592 TEPPQ6URK8 271 aa9.5□□□□□ -0.89
SMARCD3-211ENST00000485592 ARV1Q9H2C2 271 aa9.5□□□□□ -0.89
SMARCD3-211ENST00000485592 WDR83OSQ9Y284 106 aa9.5□□□□□ -0.89
SMARCD3-211ENST00000485592 DNAH5Q8TE73 4624 aa9.49□□□□□ -0.89
SMARCD3-211ENST00000485592 UBE2L5PA0A1B0GUS4 154 aa9.49□□□□□ -0.89
SMARCD3-211ENST00000485592 AGPAT2O15120 278 aa9.49□□□□□ -0.89
SMARCD3-211ENST00000485592 NHLH2Q02577 135 aa9.49□□□□□ -0.89
SMARCD3-211ENST00000485592 GFI1BQ5VTD9 330 aa9.49□□□□□ -0.89
SMARCD3-211ENST00000485592 STX12Q86Y82 276 aa9.49□□□□□ -0.89
SMARCD3-211ENST00000485592 ZNF331Q9NQX6 463 aaPredicted RBP9.49□□□□□ -0.89
SMARCD3-211ENST00000485592 UQCC1Q9NVA1 299 aa9.49□□□□□ -0.89
SMARCD3-211ENST00000485592 MBD2Q9UBB5 411 aa9.49□□□□□ -0.89
SMARCD3-211ENST00000485592 EREGO14944 169 aa9.48□□□□□ -0.89
SMARCD3-211ENST00000485592 MRPS12O15235 138 aaKnown RBP9.48□□□□□ -0.89
SMARCD3-211ENST00000485592 S100A11P31949 105 aa9.48□□□□□ -0.89
SMARCD3-211ENST00000485592 LINC00315P59091 139 aa9.48□□□□□ -0.89
SMARCD3-211ENST00000485592 KIR3DS1Q14943 382 aa9.48□□□□□ -0.89
SMARCD3-211ENST00000485592 PXDC1Q5TGL8 231 aa9.48□□□□□ -0.89
SMARCD3-211ENST00000485592 PATE2Q6UY27 113 aa9.48□□□□□ -0.89
SMARCD3-211ENST00000485592 BPIFA4PQ86YQ2 179 aa9.48□□□□□ -0.89
SMARCD3-211ENST00000485592 OR5C1Q8NGR4 320 aa9.48□□□□□ -0.89
SMARCD3-211ENST00000485592 PARD6GQ9BYG4 376 aaPredicted RBP9.48□□□□□ -0.89
SMARCD3-211ENST00000485592 MED28Q9H204 178 aa9.48□□□□□ -0.89
SMARCD3-211ENST00000485592 G3V3Q6 166 aa9.47□□□□□ -0.89
SMARCD3-211ENST00000485592 HBG1P69891 147 aa9.47□□□□□ -0.89
SMARCD3-211ENST00000485592 HBG2P69892 147 aa9.47□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms