RNA–Protein interactions for RNA: ENST00000485367.5

DDX56-212, Transcript of DEAD-box helicase 56, humanhuman

TSL 5

Gene DDX56, Length 1,781 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX56-212ENST00000485367 RNASE7Q9H1E1 156 aaKnown RBP8.4□□□□□ -1.07
DDX56-212ENST00000485367 RAB9BQ9NP90 201 aa8.4□□□□□ -1.07
DDX56-212ENST00000485367 GNG12Q9UBI6 72 aa8.4□□□□□ -1.07
DDX56-212ENST00000485367 RNF24Q9Y225 148 aa8.4□□□□□ -1.07
DDX56-212ENST00000485367 FOXA2Q9Y261 457 aaPredicted RBP8.4□□□□□ -1.07
DDX56-212ENST00000485367 IGHV1-3A0A0C4DH29 117 aa8.39□□□□□ -1.07
DDX56-212ENST00000485367 C15orf61A6NNL5 157 aa8.39□□□□□ -1.07
DDX56-212ENST00000485367 M0R2Z0 102 aa8.39□□□□□ -1.07
DDX56-212ENST00000485367 PSG1P11464 419 aa8.39□□□□□ -1.07
DDX56-212ENST00000485367 PSG5Q15238 335 aa8.39□□□□□ -1.07
DDX56-212ENST00000485367 KHDC1LQ5JSQ8 128 aa8.39□□□□□ -1.07
DDX56-212ENST00000485367 SPATA31B1PQ5VZV4 182 aa8.39□□□□□ -1.07
DDX56-212ENST00000485367 C10orf99Q6UWK7 81 aa8.39□□□□□ -1.07
DDX56-212ENST00000485367 C8orf31Q8N9H6 132 aa8.39□□□□□ -1.07
DDX56-212ENST00000485367 OR4X2Q8NGF9 303 aa8.39□□□□□ -1.07
DDX56-212ENST00000485367 MRPL32Q9BYC8 188 aaKnown RBP8.39□□□□□ -1.07
DDX56-212ENST00000485367 PLEKHA3Q9HB20 300 aa8.39□□□□□ -1.07
DDX56-212ENST00000485367 ENY2Q9NPA8 101 aa8.39□□□□□ -1.07
DDX56-212ENST00000485367 PRKDCP78527 4128 aaKnown RBP8.39□□□□□ -1.07
DDX56-212ENST00000485367 TRAV34A0A0B4J273 112 aa8.38□□□□□ -1.07
DDX56-212ENST00000485367 GAGE12BA1L429 117 aa8.38□□□□□ -1.07
DDX56-212ENST00000485367 C2orf70A6NJV1 201 aa8.38□□□□□ -1.07
DDX56-212ENST00000485367 HLA-DRB1P01911 266 aa8.38□□□□□ -1.07
DDX56-212ENST00000485367 IGLL1P15814 213 aa8.38□□□□□ -1.07
DDX56-212ENST00000485367 HSPE1P61604 102 aaKnown RBP8.38□□□□□ -1.07
DDX56-212ENST00000485367 BEAN1Q3B7T3 259 aa8.38□□□□□ -1.07
DDX56-212ENST00000485367 TMEM30BQ3MIR4 351 aa8.38□□□□□ -1.07
DDX56-212ENST00000485367 SAMD13Q5VXD3 122 aa8.38□□□□□ -1.07
DDX56-212ENST00000485367 OR4A47Q6IF82 309 aa8.38□□□□□ -1.07
DDX56-212ENST00000485367 MRPL54Q6P161 138 aaKnown RBP8.38□□□□□ -1.07
DDX56-212ENST00000485367 FAM19A2Q8N3H0 131 aa8.38□□□□□ -1.07
DDX56-212ENST00000485367 C5orf56Q8N8D9 126 aa8.38□□□□□ -1.07
DDX56-212ENST00000485367 GRAMD2BQ96HH9 432 aa8.38□□□□□ -1.07
DDX56-212ENST00000485367 S1PR3Q99500 378 aa8.38□□□□□ -1.07
DDX56-212ENST00000485367 TMEM70Q9BUB7 260 aa8.38□□□□□ -1.07
DDX56-212ENST00000485367 TMEM140Q9NV12 185 aa8.38□□□□□ -1.07
DDX56-212ENST00000485367 TSSC4Q9Y5U2 329 aaPredicted RBP8.38□□□□□ -1.07
DDX56-212ENST00000485367 PSMB11A5LHX3 300 aa8.38□□□□□ -1.07
DDX56-212ENST00000485367 NCBP2LA6PVI3 153 aaKnown RBP8.38□□□□□ -1.07
DDX56-212ENST00000485367 TAX1BP3O14907 124 aa8.38□□□□□ -1.07
DDX56-212ENST00000485367 PF4V1P10720 104 aa8.38□□□□□ -1.07
DDX56-212ENST00000485367 ZNF134P52741 427 aa8.38□□□□□ -1.07
DDX56-212ENST00000485367 SLAQ13239 276 aa8.38□□□□□ -1.07
DDX56-212ENST00000485367 TNXAQ16473 311 aa8.38□□□□□ -1.07
DDX56-212ENST00000485367 OXLD1Q5BKU9 147 aa8.38□□□□□ -1.07
DDX56-212ENST00000485367 CT45A1Q5HYN5 189 aa8.38□□□□□ -1.07
DDX56-212ENST00000485367 SAMD5Q5TGI4 173 aa8.38□□□□□ -1.07
DDX56-212ENST00000485367 MIR17HGQ75NE6 70 aa8.38□□□□□ -1.07
DDX56-212ENST00000485367 DEFB125Q8N687 156 aa8.38□□□□□ -1.07
DDX56-212ENST00000485367 ZNF436-AS1Q8NC38 126 aaPredicted RBP8.38□□□□□ -1.07
DDX56-212ENST00000485367 CT45A3Q8NHU0 189 aa8.38□□□□□ -1.07
DDX56-212ENST00000485367 ST6GALNAC6Q969X2 333 aa8.38□□□□□ -1.07
DDX56-212ENST00000485367 CHCHD1Q96BP2 118 aaKnown RBP8.38□□□□□ -1.07
DDX56-212ENST00000485367 NABP2Q9BQ15 211 aa8.38□□□□□ -1.07
DDX56-212ENST00000485367 TMEM14BQ9NUH8 114 aa8.38□□□□□ -1.07
DDX56-212ENST00000485367 OR7C2O60412 319 aa8.37□□□□□ -1.07
DDX56-212ENST00000485367 PRB2P02812 416 aaPredicted RBP8.37□□□□□ -1.07
DDX56-212ENST00000485367 SMIM17P0DL12 118 aa8.37□□□□□ -1.07
DDX56-212ENST00000485367 FXYD3Q14802 87 aa8.37□□□□□ -1.07
DDX56-212ENST00000485367 POU2AF1Q16633 256 aa8.37□□□□□ -1.07
DDX56-212ENST00000485367 EBLN2Q6P2I7 272 aa8.37□□□□□ -1.07
DDX56-212ENST00000485367 SLC25A48Q6ZT89 311 aaKnown RBP8.37□□□□□ -1.07
DDX56-212ENST00000485367 ZNF329Q86UD4 541 aa8.37□□□□□ -1.07
DDX56-212ENST00000485367 LINC00527Q9UJ94 153 aa8.37□□□□□ -1.07
DDX56-212ENST00000485367 GGTLC3B5MD39 225 aa8.36□□□□□ -1.07
DDX56-212ENST00000485367 M0R1X1 148 aa8.36□□□□□ -1.07
DDX56-212ENST00000485367 SPINK4O60575 86 aa8.36□□□□□ -1.07
DDX56-212ENST00000485367 OR5AL1P0C617 328 aa8.36□□□□□ -1.07
DDX56-212ENST00000485367 C8orf88P0DMB2 117 aa8.36□□□□□ -1.07
DDX56-212ENST00000485367 MGST1P10620 155 aaKnown RBP8.36□□□□□ -1.07
DDX56-212ENST00000485367 TCL1AP56279 114 aa8.36□□□□□ -1.07
DDX56-212ENST00000485367 EBI3Q14213 229 aa8.36□□□□□ -1.07
DDX56-212ENST00000485367 Q56UQ5 140 aa8.36□□□□□ -1.07
DDX56-212ENST00000485367 KPRPQ5T749 579 aaPredicted RBP8.36□□□□□ -1.07
DDX56-212ENST00000485367 Q8N6K4 173 aa8.36□□□□□ -1.07
DDX56-212ENST00000485367 DDB2Q92466 427 aa8.36□□□□□ -1.07
DDX56-212ENST00000485367 ADTRPQ96IZ2 230 aa8.36□□□□□ -1.07
DDX56-212ENST00000485367 MS4A6AQ9H2W1 248 aa8.36□□□□□ -1.07
DDX56-212ENST00000485367 ZNF257Q9Y2Q1 563 aa8.36□□□□□ -1.07
DDX56-212ENST00000485367 PROP1O75360 226 aa8.35□□□□□ -1.07
DDX56-212ENST00000485367 MOSP00540 346 aa8.35□□□□□ -1.07
DDX56-212ENST00000485367 PF4P02776 101 aa8.35□□□□□ -1.07
DDX56-212ENST00000485367 HIST1H1EP10412 219 aaKnown RBP8.35□□□□□ -1.07
DDX56-212ENST00000485367 LCN12Q6JVE5 192 aa8.35□□□□□ -1.07
DDX56-212ENST00000485367 SLC25A34Q6PIV7 304 aa8.35□□□□□ -1.07
DDX56-212ENST00000485367 ATOH7Q8N100 152 aa8.35□□□□□ -1.07
DDX56-212ENST00000485367 ZNF503Q96F45 646 aa8.35□□□□□ -1.07
DDX56-212ENST00000485367 TMEM191AQ9H0A3 160 aa8.35□□□□□ -1.07
DDX56-212ENST00000485367 PRNDQ9UKY0 176 aa8.35□□□□□ -1.07
DDX56-212ENST00000485367 LINC01548A6NM66 108 aa8.35□□□□□ -1.07
DDX56-212ENST00000485367 IGHG2P01859 326 aa8.35□□□□□ -1.07
DDX56-212ENST00000485367 IGLC1P0CG04 106 aa8.35□□□□□ -1.07
DDX56-212ENST00000485367 ZNF137PP52743 207 aa8.35□□□□□ -1.07
DDX56-212ENST00000485367 MFAP2P55001 183 aa8.35□□□□□ -1.07
DDX56-212ENST00000485367 SLC35B1P78383 322 aa8.35□□□□□ -1.07
DDX56-212ENST00000485367 Q6ZVH6 145 aa8.35□□□□□ -1.07
DDX56-212ENST00000485367 FER1L6-AS1Q8NA97 138 aa8.35□□□□□ -1.07
DDX56-212ENST00000485367 NHLRC2Q8NBF2 726 aa8.35□□□□□ -1.07
DDX56-212ENST00000485367 ATP6V0BQ99437 205 aa8.35□□□□□ -1.07
DDX56-212ENST00000485367 RASL11BQ9BPW5 248 aa8.35□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 11.1 ms