RNA–Protein interactions for RNA: ENST00000485027.5

KPNA1-208, Transcript of karyopherin subunit alpha 1, humanhuman

TSL 2

Gene KPNA1, Length 1,843 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KPNA1-208ENST00000485027 H1FOOQ8IZA3 346 aaPredicted RBP4.4□□□□□ -1.7
KPNA1-208ENST00000485027 LINC00471Q8N535 108 aa4.4□□□□□ -1.7
KPNA1-208ENST00000485027 RNASE6Q93091 150 aaKnown RBP4.4□□□□□ -1.7
KPNA1-208ENST00000485027 HIST1H2BLQ99880 126 aa4.4□□□□□ -1.7
KPNA1-208ENST00000485027 IMUPQ9GZP8 106 aa4.4□□□□□ -1.7
KPNA1-208ENST00000485027 CACNG5Q9UF02 275 aa4.4□□□□□ -1.7
KPNA1-208ENST00000485027 MCTS1Q9ULC4 181 aaKnown RBP4.4□□□□□ -1.7
KPNA1-208ENST00000485027 BOKQ9UMX3 212 aaPredicted RBP4.4□□□□□ -1.7
KPNA1-208ENST00000485027 MRPS16Q9Y3D3 137 aaKnown RBP4.4□□□□□ -1.7
KPNA1-208ENST00000485027 TENM4Q6N022 2769 aa4.4□□□□□ -1.7
KPNA1-208ENST00000485027 FLNCQ14315 2725 aa4.4□□□□□ -1.71
KPNA1-208ENST00000485027 RAI1Q7Z5J4 1906 aaPredicted RBP4.4□□□□□ -1.71
KPNA1-208ENST00000485027 TRAV9-1A0A075B6T8 112 aa4.39□□□□□ -1.71
KPNA1-208ENST00000485027 A0A087WWC5 75 aa4.39□□□□□ -1.71
KPNA1-208ENST00000485027 IGHV3-74A0A0B4J1X5 117 aa4.39□□□□□ -1.71
KPNA1-208ENST00000485027 KRTAP16-1A8MUX0 517 aa4.39□□□□□ -1.71
KPNA1-208ENST00000485027 HIST1H2BKO60814 126 aa4.39□□□□□ -1.71
KPNA1-208ENST00000485027 IGKV1-39P01597 117 aa4.39□□□□□ -1.71
KPNA1-208ENST00000485027 IGKV1D-39P04432 117 aa4.39□□□□□ -1.71
KPNA1-208ENST00000485027 HIST1H2BJP06899 126 aa4.39□□□□□ -1.71
KPNA1-208ENST00000485027 P0DMU3 169 aa4.39□□□□□ -1.71
KPNA1-208ENST00000485027 FAM231AP0DMU4 169 aa4.39□□□□□ -1.71
KPNA1-208ENST00000485027 FAM231CP0DMU5 169 aa4.39□□□□□ -1.71
KPNA1-208ENST00000485027 HIST1H2BOP23527 126 aa4.39□□□□□ -1.71
KPNA1-208ENST00000485027 HIST1H2BBP33778 126 aa4.39□□□□□ -1.71
KPNA1-208ENST00000485027 ZNF80P51504 273 aaPredicted RBP4.39□□□□□ -1.71
KPNA1-208ENST00000485027 HIST1H2BDP58876 126 aa4.39□□□□□ -1.71
KPNA1-208ENST00000485027 HIST1H2BCP62807 126 aa4.39□□□□□ -1.71
KPNA1-208ENST00000485027 GNB1P62873 340 aa4.39□□□□□ -1.71
KPNA1-208ENST00000485027 HIST2H2BEQ16778 126 aa4.39□□□□□ -1.71
KPNA1-208ENST00000485027 VMA21Q3ZAQ7 101 aa4.39□□□□□ -1.71
KPNA1-208ENST00000485027 HIST2H2BFQ5QNW6 126 aaPredicted RBP4.39□□□□□ -1.71
KPNA1-208ENST00000485027 RNF175Q8N4F7 328 aa4.39□□□□□ -1.71
KPNA1-208ENST00000485027 ZNF709Q8N972 641 aa4.39□□□□□ -1.71
KPNA1-208ENST00000485027 OR5D16Q8NGK9 328 aa4.39□□□□□ -1.71
KPNA1-208ENST00000485027 HIST1H2BHQ93079 126 aa4.39□□□□□ -1.71
KPNA1-208ENST00000485027 MAL2Q969L2 176 aa4.39□□□□□ -1.71
KPNA1-208ENST00000485027 MS4A6EQ96DS6 147 aa4.39□□□□□ -1.71
KPNA1-208ENST00000485027 SCN2AQ99250 2005 aa4.39□□□□□ -1.71
KPNA1-208ENST00000485027 SPIN2AQ99865 258 aa4.39□□□□□ -1.71
KPNA1-208ENST00000485027 HIST1H2BNQ99877 126 aa4.39□□□□□ -1.71
KPNA1-208ENST00000485027 HIST1H2BMQ99879 126 aa4.39□□□□□ -1.71
KPNA1-208ENST00000485027 SPIN2BQ9BPZ2 258 aa4.39□□□□□ -1.71
KPNA1-208ENST00000485027 FGF23Q9GZV9 251 aaPredicted RBP4.39□□□□□ -1.71
KPNA1-208ENST00000485027 SMDT1Q9H4I9 107 aa4.39□□□□□ -1.71
KPNA1-208ENST00000485027 MYO18BQ8IUG5 2567 aa4.39□□□□□ -1.71
KPNA1-208ENST00000485027 IGHV1-45A0A0A0MS14 117 aa4.39□□□□□ -1.71
KPNA1-208ENST00000485027 IGHV5-10-1A0A0J9YXX1 117 aa4.39□□□□□ -1.71
KPNA1-208ENST00000485027 IZUMO1RA6ND01 250 aa4.39□□□□□ -1.71
KPNA1-208ENST00000485027 ZNF73O43830 326 aaPredicted RBP4.39□□□□□ -1.71
KPNA1-208ENST00000485027 IGHV3-23P01764 117 aa4.39□□□□□ -1.71
KPNA1-208ENST00000485027 IGHA1P01876 353 aa4.39□□□□□ -1.71
KPNA1-208ENST00000485027 ZNF20P17024 532 aa4.39□□□□□ -1.71
KPNA1-208ENST00000485027 BRS3P32247 399 aa4.39□□□□□ -1.71
KPNA1-208ENST00000485027 ZNF83P51522 516 aa4.39□□□□□ -1.71
KPNA1-208ENST00000485027 FHL2Q14192 279 aa4.39□□□□□ -1.71
KPNA1-208ENST00000485027 MSMO1Q15800 293 aa4.39□□□□□ -1.71
KPNA1-208ENST00000485027 OR2T2Q6IF00 324 aa4.39□□□□□ -1.71
KPNA1-208ENST00000485027 ZNF322Q6U7Q0 402 aaPredicted RBP4.39□□□□□ -1.71
KPNA1-208ENST00000485027 LYPD2Q6UXB3 125 aa4.39□□□□□ -1.71
KPNA1-208ENST00000485027 SMIM29Q86T20 159 aa4.39□□□□□ -1.71
KPNA1-208ENST00000485027 TMEM183AQ8IXX5 376 aa4.39□□□□□ -1.71
KPNA1-208ENST00000485027 RPP25LQ8N5L8 163 aaKnown RBP4.39□□□□□ -1.71
KPNA1-208ENST00000485027 ZNF436-AS1Q8NC38 126 aaPredicted RBP4.39□□□□□ -1.71
KPNA1-208ENST00000485027 MUCL1Q96DR8 90 aa4.39□□□□□ -1.71
KPNA1-208ENST00000485027 LYZL4Q96KX0 146 aa4.39□□□□□ -1.71
KPNA1-208ENST00000485027 CBLN4Q9NTU7 201 aa4.39□□□□□ -1.71
KPNA1-208ENST00000485027 AK3Q9UIJ7 227 aa4.39□□□□□ -1.71
KPNA1-208ENST00000485027 ZNF580Q9UK33 172 aa4.39□□□□□ -1.71
KPNA1-208ENST00000485027 MED13Q9UHV7 2174 aa4.39□□□□□ -1.71
KPNA1-208ENST00000485027 TRBV6-7A0A0A0MS04 114 aa4.38□□□□□ -1.71
KPNA1-208ENST00000485027 IGKV1-6A0A0C4DH72 117 aa4.38□□□□□ -1.71
KPNA1-208ENST00000485027 A6NIN4 97 aa4.38□□□□□ -1.71
KPNA1-208ENST00000485027 LINC00869P0C866 280 aa4.38□□□□□ -1.71
KPNA1-208ENST00000485027 CRISP2P16562 243 aa4.38□□□□□ -1.71
KPNA1-208ENST00000485027 RBMXP38159 391 aaKnown RBP4.38□□□□□ -1.71
KPNA1-208ENST00000485027 C3orf22Q8N5N4 141 aa4.38□□□□□ -1.71
KPNA1-208ENST00000485027 NPBQ8NG41 125 aa4.38□□□□□ -1.71
KPNA1-208ENST00000485027 OR4S1Q8NGB4 309 aa4.38□□□□□ -1.71
KPNA1-208ENST00000485027 OR5H2Q8NGV7 314 aa4.38□□□□□ -1.71
KPNA1-208ENST00000485027 OR4A5Q8NH83 315 aa4.38□□□□□ -1.71
KPNA1-208ENST00000485027 PP6455Q8WZ26 134 aa4.38□□□□□ -1.71
KPNA1-208ENST00000485027 TMEM190Q8WZ59 177 aa4.38□□□□□ -1.71
KPNA1-208ENST00000485027 TOMM6Q96B49 74 aa4.38□□□□□ -1.71
KPNA1-208ENST00000485027 BSNQ9UPA5 3926 aa4.38□□□□□ -1.71
KPNA1-208ENST00000485027 PCNX3Q9H6A9 2034 aa4.38□□□□□ -1.71
KPNA1-208ENST00000485027 PCSK5Q92824 1860 aa4.38□□□□□ -1.71
KPNA1-208ENST00000485027 DOCK10Q96BY6 2186 aa4.37□□□□□ -1.71
KPNA1-208ENST00000485027 FAM236AA0A1B0GUQ0 79 aa4.37□□□□□ -1.71
KPNA1-208ENST00000485027 FAM236BA0A1B0GV22 79 aa4.37□□□□□ -1.71
KPNA1-208ENST00000485027 TAX1BP3O14907 124 aa4.37□□□□□ -1.71
KPNA1-208ENST00000485027 ZNF432O94892 652 aa4.37□□□□□ -1.71
KPNA1-208ENST00000485027 CCL4P13236 92 aa4.37□□□□□ -1.71
KPNA1-208ENST00000485027 SSBP1Q04837 148 aaKnown RBP4.37□□□□□ -1.71
KPNA1-208ENST00000485027 PLPP5Q8NEB5 264 aa4.37□□□□□ -1.71
KPNA1-208ENST00000485027 OR2T10Q8NGZ9 312 aa4.37□□□□□ -1.71
KPNA1-208ENST00000485027 GTSF1Q8WW33 167 aa4.37□□□□□ -1.71
KPNA1-208ENST00000485027 H1FXQ92522 213 aaKnown RBP4.37□□□□□ -1.71
KPNA1-208ENST00000485027 SDF2Q99470 211 aa4.37□□□□□ -1.71
KPNA1-208ENST00000485027 CHAC1Q9BUX1 264 aa4.37□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 49.5 ms