RNA–Protein interactions for RNA: ENST00000485023.1

DDR1-246, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

TSL 3

Gene DDR1, Length 515 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-246ENST00000485023 OR51M1Q9H341 326 aa11.71□□□□□ -0.53
DDR1-246ENST00000485023 CELA1Q9UNI1 258 aa11.71□□□□□ -0.53
DDR1-246ENST00000485023 SACSQ9NZJ4 4579 aa11.7□□□□□ -0.54
DDR1-246ENST00000485023 RNF222A6NCQ9 220 aa11.7□□□□□ -0.54
DDR1-246ENST00000485023 NUPR2A6NF83 97 aa11.7□□□□□ -0.54
DDR1-246ENST00000485023 INSP01308 110 aa11.7□□□□□ -0.54
DDR1-246ENST00000485023 RAB2AP61019 212 aa11.7□□□□□ -0.54
DDR1-246ENST00000485023 ZNF266Q14584 549 aa11.7□□□□□ -0.54
DDR1-246ENST00000485023 INO80EQ8NBZ0 244 aaPredicted RBP11.7□□□□□ -0.54
DDR1-246ENST00000485023 OR10J6PQ8NGY7 276 aa11.7□□□□□ -0.54
DDR1-246ENST00000485023 PHLDA1Q8WV24 401 aaPredicted RBP11.7□□□□□ -0.54
DDR1-246ENST00000485023 PAXXQ9BUH6 204 aa11.7□□□□□ -0.54
DDR1-246ENST00000485023 G3V3Q6 166 aa11.69□□□□□ -0.54
DDR1-246ENST00000485023 J3KRW8 73 aa11.69□□□□□ -0.54
DDR1-246ENST00000485023 CRXO43186 299 aaPredicted RBP11.69□□□□□ -0.54
DDR1-246ENST00000485023 ZNF253O75346 499 aa11.69□□□□□ -0.54
DDR1-246ENST00000485023 UBE2L3P68036 154 aaKnown RBP11.69□□□□□ -0.54
DDR1-246ENST00000485023 FAM122CQ6P4D5 195 aa11.69□□□□□ -0.54
DDR1-246ENST00000485023 CEMP1Q6PRD7 247 aaPredicted RBP11.69□□□□□ -0.54
DDR1-246ENST00000485023 FXYD5Q96DB9 178 aa11.69□□□□□ -0.54
DDR1-246ENST00000485023 PHYHIPLQ96FC7 376 aa11.69□□□□□ -0.54
DDR1-246ENST00000485023 TNFSF18Q9UNG2 199 aa11.69□□□□□ -0.54
DDR1-246ENST00000485023 PLECQ15149 4684 aaKnown RBP11.68□□□□□ -0.54
DDR1-246ENST00000485023 HBE1P02100 147 aa11.68□□□□□ -0.54
DDR1-246ENST00000485023 AMBPP02760 352 aa11.68□□□□□ -0.54
DDR1-246ENST00000485023 PRM2P04554 102 aa11.68□□□□□ -0.54
DDR1-246ENST00000485023 NBEAP1P0C6P0 100 aa11.68□□□□□ -0.54
DDR1-246ENST00000485023 ICAM4Q14773 271 aa11.68□□□□□ -0.54
DDR1-246ENST00000485023 ACOT6Q3I5F7 207 aaPredicted RBP11.68□□□□□ -0.54
DDR1-246ENST00000485023 RNF141Q8WVD5 230 aa11.68□□□□□ -0.54
DDR1-246ENST00000485023 ZNF503Q96F45 646 aa11.68□□□□□ -0.54
DDR1-246ENST00000485023 SH3BGRL3Q9H299 93 aa11.68□□□□□ -0.54
DDR1-246ENST00000485023 AAMDCQ9H7C9 122 aa11.68□□□□□ -0.54
DDR1-246ENST00000485023 BIRC6Q9NR09 4857 aa11.68□□□□□ -0.54
DDR1-246ENST00000485023 RYR2Q92736 4967 aa11.67□□□□□ -0.54
DDR1-246ENST00000485023 LCE6AA0A183 80 aa11.67□□□□□ -0.54
DDR1-246ENST00000485023 LOC102723971A0A1B0GUV8 181 aa11.67□□□□□ -0.54
DDR1-246ENST00000485023 HMGB3O15347 200 aaKnown RBP11.67□□□□□ -0.54
DDR1-246ENST00000485023 ARPC5O15511 151 aa11.67□□□□□ -0.54
DDR1-246ENST00000485023 ATP6V0CP27449 155 aa11.67□□□□□ -0.54
DDR1-246ENST00000485023 PDE6HQ13956 83 aa11.67□□□□□ -0.54
DDR1-246ENST00000485023 KIR3DS1Q14943 382 aa11.67□□□□□ -0.54
DDR1-246ENST00000485023 KHDC3LQ587J8 217 aa11.67□□□□□ -0.54
DDR1-246ENST00000485023 RPP25LQ8N5L8 163 aaKnown RBP11.67□□□□□ -0.54
DDR1-246ENST00000485023 NEU1Q99519 415 aa11.67□□□□□ -0.54
DDR1-246ENST00000485023 TENM2Q9NT68 2774 aa11.67□□□□□ -0.54
DDR1-246ENST00000485023 A0A1W2PPV4 95 aa11.66□□□□□ -0.54
DDR1-246ENST00000485023 ZNF705GA8MUZ8 300 aaPredicted RBP11.66□□□□□ -0.54
DDR1-246ENST00000485023 M6PRP20645 277 aa11.66□□□□□ -0.54
DDR1-246ENST00000485023 TAS2R45P59539 299 aa11.66□□□□□ -0.54
DDR1-246ENST00000485023 ERCC8Q13216 396 aa11.66□□□□□ -0.54
DDR1-246ENST00000485023 RRN3P1Q2M238 152 aa11.66□□□□□ -0.54
DDR1-246ENST00000485023 RPL7L1Q6DKI1 246 aaKnown RBP11.66□□□□□ -0.54
DDR1-246ENST00000485023 Q6ZTC4 211 aa11.66□□□□□ -0.54
DDR1-246ENST00000485023 OR10G4Q8NGN3 311 aa11.66□□□□□ -0.54
DDR1-246ENST00000485023 OR10G9Q8NGN4 311 aa11.66□□□□□ -0.54
DDR1-246ENST00000485023 OR10G7Q8NGN6 311 aa11.66□□□□□ -0.54
DDR1-246ENST00000485023 KLK5Q9Y337 293 aaPredicted RBP11.66□□□□□ -0.54
DDR1-246ENST00000485023 ALMS1Q8TCU4 4167 aa11.65□□□□□ -0.54
DDR1-246ENST00000485023 IGKV2-40A0A087WW87 121 aaPredicted RBP11.65□□□□□ -0.54
DDR1-246ENST00000485023 SMIM9A6NGZ8 99 aa11.65□□□□□ -0.54
DDR1-246ENST00000485023 NPIPB6E9PJ23 425 aa11.65□□□□□ -0.54
DDR1-246ENST00000485023 JTBO76095 146 aa11.65□□□□□ -0.54
DDR1-246ENST00000485023 IGKV2D-40P01614 121 aaPredicted RBP11.65□□□□□ -0.54
DDR1-246ENST00000485023 CT45A10P0DMU9 189 aa11.65□□□□□ -0.54
DDR1-246ENST00000485023 HTN1P15515 57 aa11.65□□□□□ -0.54
DDR1-246ENST00000485023 CDKN1BP46527 198 aa11.65□□□□□ -0.54
DDR1-246ENST00000485023 RANP62826 216 aaKnown RBP11.65□□□□□ -0.54
DDR1-246ENST00000485023 MRPL53Q96EL3 112 aaKnown RBP11.65□□□□□ -0.54
DDR1-246ENST00000485023 LINC01587Q99440 93 aa11.65□□□□□ -0.54
DDR1-246ENST00000485023 PRELID1Q9Y255 219 aa11.65□□□□□ -0.54
DDR1-246ENST00000485023 GFI1BQ5VTD9 330 aa11.64□□□□□ -0.55
DDR1-246ENST00000485023 PSMG3Q9BT73 122 aaPredicted RBP11.64□□□□□ -0.55
DDR1-246ENST00000485023 YTHDF2Q9Y5A9 579 aaKnown RBP11.64□□□□□ -0.55
DDR1-246ENST00000485023 BORCS7-ASMTA0A0B4J1R7 106 aa11.63□□□□□ -0.55
DDR1-246ENST00000485023 TMEM189A5PLL7 270 aa11.63□□□□□ -0.55
DDR1-246ENST00000485023 TSPOP30536 169 aa11.63□□□□□ -0.55
DDR1-246ENST00000485023 CDC34P49427 236 aaPredicted RBP11.63□□□□□ -0.55
DDR1-246ENST00000485023 C12orf74Q32Q52 190 aa11.63□□□□□ -0.55
DDR1-246ENST00000485023 FAM222AQ5U5X8 452 aa11.63□□□□□ -0.55
DDR1-246ENST00000485023 OR2G3Q8NGZ4 309 aa11.63□□□□□ -0.55
DDR1-246ENST00000485023 Q9H3A6 140 aa11.63□□□□□ -0.55
DDR1-246ENST00000485023 PLA2G2EQ9NZK7 142 aa11.63□□□□□ -0.55
DDR1-246ENST00000485023 SPART-AS1P0CW21 52 aa11.62□□□□□ -0.55
DDR1-246ENST00000485023 AZU1P20160 251 aa11.62□□□□□ -0.55
DDR1-246ENST00000485023 LEPP41159 167 aa11.62□□□□□ -0.55
DDR1-246ENST00000485023 HYLS1Q96M11 299 aa11.62□□□□□ -0.55
DDR1-246ENST00000485023 RPH3ALQ9UNE2 315 aa11.62□□□□□ -0.55
DDR1-246ENST00000485023 EPPK1P58107 5090 aaKnown RBP11.61□□□□□ -0.55
DDR1-246ENST00000485023 LYSTQ99698 3801 aa11.61□□□□□ -0.55
DDR1-246ENST00000485023 TRAV12-3A0A0B4J271 114 aa11.61□□□□□ -0.55
DDR1-246ENST00000485023 ARL14EPLP0DKL9 152 aa11.61□□□□□ -0.55
DDR1-246ENST00000485023 Q8TAT8 98 aa11.61□□□□□ -0.55
DDR1-246ENST00000485023 C2CD4CQ8TF44 421 aa11.61□□□□□ -0.55
DDR1-246ENST00000485023 VGLL1Q99990 258 aa11.61□□□□□ -0.55
DDR1-246ENST00000485023 AGPAT4-IT1Q9H0P7 198 aa11.61□□□□□ -0.55
DDR1-246ENST00000485023 DKK2Q9UBU2 259 aa11.61□□□□□ -0.55
DDR1-246ENST00000485023 DNAH1Q9P2D7 4330 aa11.61□□□□□ -0.55
DDR1-246ENST00000485023 TRAV10A0A0B4J240 114 aa11.6□□□□□ -0.55
DDR1-246ENST00000485023 IGLL5B9A064 214 aa11.6□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 47.2 ms