RNA–Protein interactions for RNA: ENST00000484855.2

CTSA-207, Transcript of cathepsin A, humanhuman

TSL 1 (best)

Gene CTSA, Length 2,183 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSA-207ENST00000484855 GRAMD2BQ96HH9 432 aa12.79□□□□□ -0.36
CTSA-207ENST00000484855 SMIM27A0A1W2PRY6 76 aa12.78□□□□□ -0.36
CTSA-207ENST00000484855 PHOX2AO14813 284 aa12.78□□□□□ -0.36
CTSA-207ENST00000484855 LINC00322Q6ZN03 302 aaPredicted RBP12.78□□□□□ -0.36
CTSA-207ENST00000484855 MYOZ3Q8TDC0 251 aa12.78□□□□□ -0.36
CTSA-207ENST00000484855 A0A1W2PS18 150 aa12.77□□□□□ -0.36
CTSA-207ENST00000484855 HIST1H2BKO60814 126 aa12.77□□□□□ -0.36
CTSA-207ENST00000484855 HIST1H2BJP06899 126 aa12.77□□□□□ -0.36
CTSA-207ENST00000484855 TRGC1P0CF51 173 aa12.77□□□□□ -0.36
CTSA-207ENST00000484855 HIST1H2BOP23527 126 aa12.77□□□□□ -0.36
CTSA-207ENST00000484855 HIST1H2BBP33778 126 aa12.77□□□□□ -0.36
CTSA-207ENST00000484855 HIST1H2BDP58876 126 aa12.77□□□□□ -0.36
CTSA-207ENST00000484855 HIST1H2BCP62807 126 aa12.77□□□□□ -0.36
CTSA-207ENST00000484855 HIST2H2BEQ16778 126 aa12.77□□□□□ -0.36
CTSA-207ENST00000484855 FAM106AQ4KMX7 169 aa12.77□□□□□ -0.36
CTSA-207ENST00000484855 ACTL10Q5JWF8 245 aa12.77□□□□□ -0.36
CTSA-207ENST00000484855 HIST2H2BFQ5QNW6 126 aaPredicted RBP12.77□□□□□ -0.36
CTSA-207ENST00000484855 C8orf86Q6ZUL3 223 aa12.77□□□□□ -0.36
CTSA-207ENST00000484855 Q71RC1 249 aaPredicted RBP12.77□□□□□ -0.36
CTSA-207ENST00000484855 GBGT1Q8N5D6 347 aa12.77□□□□□ -0.36
CTSA-207ENST00000484855 HIST1H2BHQ93079 126 aa12.77□□□□□ -0.36
CTSA-207ENST00000484855 DAZAP1Q96EP5 407 aaKnown RBP12.77□□□□□ -0.36
CTSA-207ENST00000484855 HIST1H2BNQ99877 126 aa12.77□□□□□ -0.36
CTSA-207ENST00000484855 HIST1H2BMQ99879 126 aa12.77□□□□□ -0.36
CTSA-207ENST00000484855 ASCL2Q99929 193 aa12.77□□□□□ -0.36
CTSA-207ENST00000484855 DAZ1Q9NQZ3 744 aaKnown RBP12.77□□□□□ -0.36
CTSA-207ENST00000484855 C19orf71A6NCJ1 209 aa12.77□□□□□ -0.37
CTSA-207ENST00000484855 C5orf52A6NGY3 159 aa12.77□□□□□ -0.37
CTSA-207ENST00000484855 ZNF705FA8MVS1 300 aaPredicted RBP12.77□□□□□ -0.37
CTSA-207ENST00000484855 P01737 135 aa12.77□□□□□ -0.37
CTSA-207ENST00000484855 RNF182Q8N6D2 247 aa12.77□□□□□ -0.37
CTSA-207ENST00000484855 IGHV7-4-1A0A0J9YVY3 117 aa12.76□□□□□ -0.37
CTSA-207ENST00000484855 LGALS1P09382 135 aaKnown RBP12.76□□□□□ -0.37
CTSA-207ENST00000484855 LCN12Q6JVE5 192 aa12.76□□□□□ -0.37
CTSA-207ENST00000484855 GPHB5Q86YW7 130 aa12.76□□□□□ -0.37
CTSA-207ENST00000484855 RNF152Q8N8N0 203 aa12.76□□□□□ -0.37
CTSA-207ENST00000484855 RPP21Q9H633 154 aaKnown RBP12.76□□□□□ -0.37
CTSA-207ENST00000484855 ACANP16112 2415 aa12.76□□□□□ -0.37
CTSA-207ENST00000484855 FAM181BA6NEQ2 426 aa12.76□□□□□ -0.37
CTSA-207ENST00000484855 FBLL1A6NHQ2 334 aaKnown RBP12.76□□□□□ -0.37
CTSA-207ENST00000484855 TM4SF20Q53R12 229 aa12.76□□□□□ -0.37
CTSA-207ENST00000484855 ZC2HC1AQ96GY0 325 aa12.76□□□□□ -0.37
CTSA-207ENST00000484855 UBE2E2Q96LR5 201 aa12.76□□□□□ -0.37
CTSA-207ENST00000484855 RPL19P84098 196 aaKnown RBP12.75□□□□□ -0.37
CTSA-207ENST00000484855 FABP9Q0Z7S8 132 aa12.75□□□□□ -0.37
CTSA-207ENST00000484855 TRAPPC1Q9Y5R8 145 aa12.75□□□□□ -0.37
CTSA-207ENST00000484855 TRAV8-2A0A0B4J237 113 aa12.74□□□□□ -0.37
CTSA-207ENST00000484855 TSKUQ8WUA8 353 aa12.74□□□□□ -0.37
CTSA-207ENST00000484855 VGLL1Q99990 258 aa12.74□□□□□ -0.37
CTSA-207ENST00000484855 ESM1Q9NQ30 184 aa12.74□□□□□ -0.37
CTSA-207ENST00000484855 IZUMO1RA6ND01 250 aa12.74□□□□□ -0.37
CTSA-207ENST00000484855 K7EMT4 169 aa12.74□□□□□ -0.37
CTSA-207ENST00000484855 SPINK4O60575 86 aa12.74□□□□□ -0.37
CTSA-207ENST00000484855 NDUFA6P56556 154 aa12.74□□□□□ -0.37
CTSA-207ENST00000484855 SCGB2A2Q13296 93 aa12.74□□□□□ -0.37
CTSA-207ENST00000484855 CT83Q5H943 113 aa12.74□□□□□ -0.37
CTSA-207ENST00000484855 KLHDC1Q8N7A1 406 aa12.74□□□□□ -0.37
CTSA-207ENST00000484855 MRPL53Q96EL3 112 aaKnown RBP12.74□□□□□ -0.37
CTSA-207ENST00000484855 C16orf92Q96LL3 132 aa12.74□□□□□ -0.37
CTSA-207ENST00000484855 C8orf49Q96NF6 230 aa12.74□□□□□ -0.37
CTSA-207ENST00000484855 RHPN1-AS1Q9BWJ2 59 aa12.74□□□□□ -0.37
CTSA-207ENST00000484855 UFC1Q9Y3C8 167 aa12.74□□□□□ -0.37
CTSA-207ENST00000484855 UBE2CO00762 179 aa12.73□□□□□ -0.37
CTSA-207ENST00000484855 Q6ZSV7 163 aa12.73□□□□□ -0.37
CTSA-207ENST00000484855 MYO9AB2RTY4 2548 aa12.73□□□□□ -0.37
CTSA-207ENST00000484855 PRAC2D3DTV9 90 aa12.73□□□□□ -0.37
CTSA-207ENST00000484855 CT45A10P0DMU9 189 aa12.73□□□□□ -0.37
CTSA-207ENST00000484855 OR4B1Q8NGF8 309 aa12.73□□□□□ -0.37
CTSA-207ENST00000484855 NEU1Q99519 415 aa12.73□□□□□ -0.37
CTSA-207ENST00000484855 CLEC5AQ9NY25 188 aa12.73□□□□□ -0.37
CTSA-207ENST00000484855 NAT8BQ9UHF3 227 aa12.73□□□□□ -0.37
CTSA-207ENST00000484855 SMPXQ9UHP9 88 aa12.73□□□□□ -0.37
CTSA-207ENST00000484855 RBAKDNA6NC62 111 aa12.72□□□□□ -0.37
CTSA-207ENST00000484855 A8MWL6 223 aa12.72□□□□□ -0.37
CTSA-207ENST00000484855 NPIPB6E9PJ23 425 aa12.72□□□□□ -0.37
CTSA-207ENST00000484855 CBLN1P23435 193 aa12.72□□□□□ -0.37
CTSA-207ENST00000484855 SAPCD1Q5SSQ6 148 aa12.72□□□□□ -0.37
CTSA-207ENST00000484855 Q8TAT8 98 aa12.72□□□□□ -0.37
CTSA-207ENST00000484855 IGHV4OR15-8A0A075B7B6 117 aa12.71□□□□□ -0.37
CTSA-207ENST00000484855 A0A087WW49 117 aa12.71□□□□□ -0.37
CTSA-207ENST00000484855 HIGD1CA8MV81 97 aa12.71□□□□□ -0.37
CTSA-207ENST00000484855 RPL11P62913 178 aaKnown RBP12.71□□□□□ -0.37
CTSA-207ENST00000484855 MRPL54Q6P161 138 aaKnown RBP12.71□□□□□ -0.37
CTSA-207ENST00000484855 NUP35Q8NFH5 326 aa12.71□□□□□ -0.37
CTSA-207ENST00000484855 PRR25Q96S07 402 aa12.71□□□□□ -0.37
CTSA-207ENST00000484855 TMEM160Q9NX00 188 aa12.71□□□□□ -0.37
CTSA-207ENST00000484855 FRMD6-AS1P0C7T7 363 aa12.71□□□□□ -0.37
CTSA-207ENST00000484855 EDN2P20800 178 aa12.71□□□□□ -0.37
CTSA-207ENST00000484855 NDFIP1Q9BT67 221 aa12.71□□□□□ -0.37
CTSA-207ENST00000484855 SNURFLB1AK76 121 aa12.7□□□□□ -0.38
CTSA-207ENST00000484855 BMI1P35226 326 aa12.7□□□□□ -0.38
CTSA-207ENST00000484855 ERCC8Q13216 396 aa12.7□□□□□ -0.38
CTSA-207ENST00000484855 OR2D3Q8NGH3 330 aa12.7□□□□□ -0.38
CTSA-207ENST00000484855 SMR3AQ99954 134 aa12.7□□□□□ -0.38
CTSA-207ENST00000484855 NRN1Q9NPD7 142 aa12.7□□□□□ -0.38
CTSA-207ENST00000484855 CUBNO60494 3623 aa12.7□□□□□ -0.38
CTSA-207ENST00000484855 CRIP1P50238 77 aa12.7□□□□□ -0.38
CTSA-207ENST00000484855 AKR1D1P51857 326 aa12.7□□□□□ -0.38
CTSA-207ENST00000484855 COX19Q49B96 90 aa12.7□□□□□ -0.38
CTSA-207ENST00000484855 WDR73Q6P4I2 378 aa12.7□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 46.7 ms