RNA–Protein interactions for RNA: ENST00000484178.5

SSBP1-211, Transcript of single stranded DNA binding protein 1, humanhuman

APPRIS P1 TSL 3 BASIC

Gene SSBP1, Length 676 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP1-211ENST00000484178 C17orf77Q96MU5 243 aa3.73□□□□□ -1.81
SSBP1-211ENST00000484178 SLC25A39Q9BZJ4 359 aaPredicted RBP3.73□□□□□ -1.81
SSBP1-211ENST00000484178 CSTL1Q9H114 145 aa3.73□□□□□ -1.81
SSBP1-211ENST00000484178 CLEC5AQ9NY25 188 aa3.73□□□□□ -1.81
SSBP1-211ENST00000484178 KNL1Q8NG31 2342 aa3.72□□□□□ -1.81
SSBP1-211ENST00000484178 PPIAL4EA0A075B759 164 aa3.72□□□□□ -1.81
SSBP1-211ENST00000484178 F2Z2F3 143 aa3.72□□□□□ -1.81
SSBP1-211ENST00000484178 PPIAL4DF5H284 164 aa3.72□□□□□ -1.81
SSBP1-211ENST00000484178 K7EMI3 77 aa3.72□□□□□ -1.81
SSBP1-211ENST00000484178 M0R1B8 84 aa3.72□□□□□ -1.81
SSBP1-211ENST00000484178 MOSP00540 346 aa3.72□□□□□ -1.81
SSBP1-211ENST00000484178 IGHV1-46P01743 117 aa3.72□□□□□ -1.81
SSBP1-211ENST00000484178 PPIAL4FP0DN26 164 aa3.72□□□□□ -1.81
SSBP1-211ENST00000484178 TAL2Q16559 108 aa3.72□□□□□ -1.81
SSBP1-211ENST00000484178 TMEM97Q5BJF2 176 aa3.72□□□□□ -1.81
SSBP1-211ENST00000484178 FAM120AOSQ5T036 256 aa3.72□□□□□ -1.81
SSBP1-211ENST00000484178 C1orf185Q5T7R7 199 aa3.72□□□□□ -1.81
SSBP1-211ENST00000484178 PATE2Q6UY27 113 aa3.72□□□□□ -1.81
SSBP1-211ENST00000484178 FAM19A2Q8N3H0 131 aa3.72□□□□□ -1.81
SSBP1-211ENST00000484178 RASL11BQ9BPW5 248 aa3.72□□□□□ -1.81
SSBP1-211ENST00000484178 DCTN5Q9BTE1 182 aa3.72□□□□□ -1.81
SSBP1-211ENST00000484178 MRPL20Q9BYC9 149 aaKnown RBP3.72□□□□□ -1.81
SSBP1-211ENST00000484178 PRO3102Q9H379 93 aa3.72□□□□□ -1.81
SSBP1-211ENST00000484178 Q9H3A6 140 aa3.72□□□□□ -1.81
SSBP1-211ENST00000484178 CST9LQ9H4G1 147 aa3.72□□□□□ -1.81
SSBP1-211ENST00000484178 HIGD1BQ9P298 99 aa3.72□□□□□ -1.81
SSBP1-211ENST00000484178 PPIAL4AQ9Y536 164 aa3.72□□□□□ -1.81
SSBP1-211ENST00000484178 F11RQ9Y624 299 aaKnown RBP3.72□□□□□ -1.81
SSBP1-211ENST00000484178 U3KQK5 164 aa3.72□□□□□ -1.81
SSBP1-211ENST00000484178 A0A0C4DFX4 3053 aa3.72□□□□□ -1.81
SSBP1-211ENST00000484178 IGKV1D-37A0A075B6S9 117 aa3.71□□□□□ -1.82
SSBP1-211ENST00000484178 A0A1W2PPI3 338 aa3.71□□□□□ -1.82
SSBP1-211ENST00000484178 LINC01546A6NGU7 62 aa3.71□□□□□ -1.82
SSBP1-211ENST00000484178 KRTAP9-6A8MVA2 160 aa3.71□□□□□ -1.82
SSBP1-211ENST00000484178 OOSP1A8MZH6 123 aa3.71□□□□□ -1.82
SSBP1-211ENST00000484178 NDUFS8O00217 210 aa3.71□□□□□ -1.82
SSBP1-211ENST00000484178 TAX1BP3O14907 124 aa3.71□□□□□ -1.82
SSBP1-211ENST00000484178 SPINK4O60575 86 aa3.71□□□□□ -1.82
SSBP1-211ENST00000484178 ATP5LO75964 103 aa3.71□□□□□ -1.82
SSBP1-211ENST00000484178 IGLV2-23P01705 113 aa3.71□□□□□ -1.82
SSBP1-211ENST00000484178 HBDP02042 147 aa3.71□□□□□ -1.82
SSBP1-211ENST00000484178 IGKV1-16P04430 117 aa3.71□□□□□ -1.82
SSBP1-211ENST00000484178 CEACAM8P31997 349 aaPredicted RBP3.71□□□□□ -1.82
SSBP1-211ENST00000484178 TFPI2P48307 235 aa3.71□□□□□ -1.82
SSBP1-211ENST00000484178 GNG10P50151 68 aa3.71□□□□□ -1.82
SSBP1-211ENST00000484178 HILS1P60008 231 aa3.71□□□□□ -1.82
SSBP1-211ENST00000484178 RPL24P83731 157 aaKnown RBP3.71□□□□□ -1.82
SSBP1-211ENST00000484178 WT1-ASQ06250 92 aa3.71□□□□□ -1.82
SSBP1-211ENST00000484178 TMEM155Q4W5P6 130 aa3.71□□□□□ -1.82
SSBP1-211ENST00000484178 HES3Q5TGS1 186 aa3.71□□□□□ -1.82
SSBP1-211ENST00000484178 GDF5OSQ5U4N7 250 aa3.71□□□□□ -1.82
SSBP1-211ENST00000484178 UNQ5815/PRO19632Q6UWF5 114 aa3.71□□□□□ -1.82
SSBP1-211ENST00000484178 ORMDL3Q8N138 153 aa3.71□□□□□ -1.82
SSBP1-211ENST00000484178 MTURNQ8N3F0 131 aa3.71□□□□□ -1.82
SSBP1-211ENST00000484178 OR1B1Q8NGR6 318 aa3.71□□□□□ -1.82
SSBP1-211ENST00000484178 BLNKQ8WV28 456 aa3.71□□□□□ -1.82
SSBP1-211ENST00000484178 FAM122AQ96E09 287 aa3.71□□□□□ -1.82
SSBP1-211ENST00000484178 VPS25Q9BRG1 176 aa3.71□□□□□ -1.82
SSBP1-211ENST00000484178 SHANK2-AS3Q9BTD1 123 aa3.71□□□□□ -1.82
SSBP1-211ENST00000484178 UBTD1Q9HAC8 227 aa3.71□□□□□ -1.82
SSBP1-211ENST00000484178 NXT2Q9NPJ8 142 aaKnown RBP3.71□□□□□ -1.82
SSBP1-211ENST00000484178 THYN1Q9P016 225 aa3.71□□□□□ -1.82
SSBP1-211ENST00000484178 R4GN57 208 aa3.71□□□□□ -1.82
SSBP1-211ENST00000484178 CABIN1Q9Y6J0 2220 aa3.71□□□□□ -1.82
SSBP1-211ENST00000484178 TRBV19A0A075B6N1 114 aa3.7□□□□□ -1.82
SSBP1-211ENST00000484178 LOC105371242A0A075B767 164 aa3.7□□□□□ -1.82
SSBP1-211ENST00000484178 IGHV3OR15-7A0A075B7D8 119 aa3.7□□□□□ -1.82
SSBP1-211ENST00000484178 RBAKDNA6NC62 111 aa3.7□□□□□ -1.82
SSBP1-211ENST00000484178 LINC01619G3V211 115 aa3.7□□□□□ -1.82
SSBP1-211ENST00000484178 C16orf97H3BN30 126 aa3.7□□□□□ -1.82
SSBP1-211ENST00000484178 CRYGBP07316 175 aa3.7□□□□□ -1.82
SSBP1-211ENST00000484178 IGLC1P0CG04 106 aa3.7□□□□□ -1.82
SSBP1-211ENST00000484178 PYYP10082 97 aa3.7□□□□□ -1.82
SSBP1-211ENST00000484178 FABP2P12104 132 aa3.7□□□□□ -1.82
SSBP1-211ENST00000484178 RPL7P18124 248 aaKnown RBP3.7□□□□□ -1.82
SSBP1-211ENST00000484178 ORM2P19652 201 aa3.7□□□□□ -1.82
SSBP1-211ENST00000484178 SLC35B1P78383 322 aa3.7□□□□□ -1.82
SSBP1-211ENST00000484178 SRSF6Q13247 344 aaKnown RBP3.7□□□□□ -1.82
SSBP1-211ENST00000484178 PSG3Q16557 428 aa3.7□□□□□ -1.82
SSBP1-211ENST00000484178 MPV17L2Q567V2 206 aa3.7□□□□□ -1.82
SSBP1-211ENST00000484178 LCN12Q6JVE5 192 aa3.7□□□□□ -1.82
SSBP1-211ENST00000484178 FAM53AQ6NSI3 398 aaPredicted RBP3.7□□□□□ -1.82
SSBP1-211ENST00000484178 Q6ZS92 163 aa3.7□□□□□ -1.82
SSBP1-211ENST00000484178 PPP1R27Q86WC6 154 aa3.7□□□□□ -1.82
SSBP1-211ENST00000484178 GTSF1Q8WW33 167 aa3.7□□□□□ -1.82
SSBP1-211ENST00000484178 ARPC1AQ92747 370 aa3.7□□□□□ -1.82
SSBP1-211ENST00000484178 PGLYRP4Q96LB8 373 aa3.7□□□□□ -1.82
SSBP1-211ENST00000484178 CCL13Q99616 98 aa3.7□□□□□ -1.82
SSBP1-211ENST00000484178 TMEM133Q9H2Q1 129 aa3.7□□□□□ -1.82
SSBP1-211ENST00000484178 FNDC4Q9H6D8 234 aaPredicted RBP3.7□□□□□ -1.82
SSBP1-211ENST00000484178 SIGLEC8Q9NYZ4 499 aa3.7□□□□□ -1.82
SSBP1-211ENST00000484178 SIGLEC9Q9Y336 463 aa3.7□□□□□ -1.82
SSBP1-211ENST00000484178 NCKAP5O14513 1909 aa3.7□□□□□ -1.82
SSBP1-211ENST00000484178 IGLV5-37A0A075B6J1 123 aa3.69□□□□□ -1.82
SSBP1-211ENST00000484178 TRAV5A0A0B4J249 113 aa3.69□□□□□ -1.82
SSBP1-211ENST00000484178 IGHV3-64DA0A0J9YX35 117 aa3.69□□□□□ -1.82
SSBP1-211ENST00000484178 TMEM189A5PLL7 270 aa3.69□□□□□ -1.82
SSBP1-211ENST00000484178 H3BRN7 92 aa3.69□□□□□ -1.82
SSBP1-211ENST00000484178 K7EP34 96 aa3.69□□□□□ -1.82
SSBP1-211ENST00000484178 CIDEAO60543 219 aa3.69□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms