RNA–Protein interactions for RNA: ENST00000484087.5

BRCA1-216, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 5

Gene BRCA1, Length 1,495 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-216ENST00000484087 CLEC19AQ6UXS0 136 aa5.33□□□□□ -1.56
BRCA1-216ENST00000484087 LYPD1Q8N2G4 141 aa5.33□□□□□ -1.56
BRCA1-216ENST00000484087 OR10G8Q8NGN5 311 aa5.33□□□□□ -1.56
BRCA1-216ENST00000484087 OCC1Q8TAD7 63 aa5.33□□□□□ -1.56
BRCA1-216ENST00000484087 C2CD4CQ8TF44 421 aa5.33□□□□□ -1.56
BRCA1-216ENST00000484087 FAM210BQ96KR6 192 aa5.33□□□□□ -1.56
BRCA1-216ENST00000484087 IMMP2LQ96T52 175 aa5.33□□□□□ -1.56
BRCA1-216ENST00000484087 ELOVL1Q9BW60 279 aa5.33□□□□□ -1.56
BRCA1-216ENST00000484087 AAMDCQ9H7C9 122 aa5.33□□□□□ -1.56
BRCA1-216ENST00000484087 BIN3Q9NQY0 253 aa5.33□□□□□ -1.56
BRCA1-216ENST00000484087 OTORQ9NRC9 128 aa5.33□□□□□ -1.56
BRCA1-216ENST00000484087 EPDR1Q9UM22 224 aa5.33□□□□□ -1.56
BRCA1-216ENST00000484087 TRBV24-1A0A075B6N3 115 aa5.32□□□□□ -1.56
BRCA1-216ENST00000484087 IGLL1P15814 213 aa5.32□□□□□ -1.56
BRCA1-216ENST00000484087 ERVFC1-1P60608 527 aa5.32□□□□□ -1.56
BRCA1-216ENST00000484087 RPL11P62913 178 aaKnown RBP5.32□□□□□ -1.56
BRCA1-216ENST00000484087 PSG9Q00887 426 aa5.32□□□□□ -1.56
BRCA1-216ENST00000484087 PDE6HQ13956 83 aa5.32□□□□□ -1.56
BRCA1-216ENST00000484087 USF2Q15853 346 aaPredicted RBP5.32□□□□□ -1.56
BRCA1-216ENST00000484087 ZNF343Q6P1L6 599 aa5.32□□□□□ -1.56
BRCA1-216ENST00000484087 NDUFA11Q86Y39 141 aa5.32□□□□□ -1.56
BRCA1-216ENST00000484087 OR8I2Q8N0Y5 310 aa5.32□□□□□ -1.56
BRCA1-216ENST00000484087 KLHL30-AS1Q8NEE0 82 aa5.32□□□□□ -1.56
BRCA1-216ENST00000484087 OR4X2Q8NGF9 303 aa5.32□□□□□ -1.56
BRCA1-216ENST00000484087 SMIM12Q96EX1 92 aa5.32□□□□□ -1.56
BRCA1-216ENST00000484087 ATG101Q9BSB4 218 aa5.32□□□□□ -1.56
BRCA1-216ENST00000484087 CHRDL1Q9BU40 450 aa5.32□□□□□ -1.56
BRCA1-216ENST00000484087 Q9H3A6 140 aa5.32□□□□□ -1.56
BRCA1-216ENST00000484087 AP5S1Q9NUS5 200 aa5.32□□□□□ -1.56
BRCA1-216ENST00000484087 ZNF580Q9UK33 172 aa5.32□□□□□ -1.56
BRCA1-216ENST00000484087 RPH3ALQ9UNE2 315 aa5.32□□□□□ -1.56
BRCA1-216ENST00000484087 TRBV20OR9-2A0A075B6H5 130 aa5.32□□□□□ -1.56
BRCA1-216ENST00000484087 TRBV19A0A075B6N1 114 aa5.32□□□□□ -1.56
BRCA1-216ENST00000484087 PGPEP1LA6NFU8 196 aa5.32□□□□□ -1.56
BRCA1-216ENST00000484087 PPP5D1E7EU14 171 aa5.32□□□□□ -1.56
BRCA1-216ENST00000484087 MGST1P10620 155 aaKnown RBP5.32□□□□□ -1.56
BRCA1-216ENST00000484087 MYCNOSP40205 109 aa5.32□□□□□ -1.56
BRCA1-216ENST00000484087 CSN1S1P47710 185 aa5.32□□□□□ -1.56
BRCA1-216ENST00000484087 SLC35B1P78383 322 aa5.32□□□□□ -1.56
BRCA1-216ENST00000484087 CFHR3Q02985 330 aa5.32□□□□□ -1.56
BRCA1-216ENST00000484087 TMEM183BQ1AE95 376 aa5.32□□□□□ -1.56
BRCA1-216ENST00000484087 TEX38Q6PEX7 206 aa5.32□□□□□ -1.56
BRCA1-216ENST00000484087 TOMM20LQ6UXN7 152 aa5.32□□□□□ -1.56
BRCA1-216ENST00000484087 BAGE2Q86Y30 109 aa5.32□□□□□ -1.56
BRCA1-216ENST00000484087 FMC1Q96HJ9 113 aa5.32□□□□□ -1.56
BRCA1-216ENST00000484087 YPEL4Q96NS1 127 aa5.32□□□□□ -1.56
BRCA1-216ENST00000484087 GPR82Q96P67 336 aa5.32□□□□□ -1.56
BRCA1-216ENST00000484087 METTL26Q96S19 204 aa5.32□□□□□ -1.56
BRCA1-216ENST00000484087 KLK15Q9H2R5 256 aa5.32□□□□□ -1.56
BRCA1-216ENST00000484087 AURKAIP1Q9NWT8 199 aaPredicted RBP5.32□□□□□ -1.56
BRCA1-216ENST00000484087 ZNF586Q9NXT0 402 aa5.32□□□□□ -1.56
BRCA1-216ENST00000484087 TSSC4Q9Y5U2 329 aaPredicted RBP5.32□□□□□ -1.56
BRCA1-216ENST00000484087 TRAV9-1A0A075B6T8 112 aa5.31□□□□□ -1.56
BRCA1-216ENST00000484087 TGIF2-C20orf24A0A0A6YYL0 155 aa5.31□□□□□ -1.56
BRCA1-216ENST00000484087 LOC105371267A0A1B0GV96 52 aa5.31□□□□□ -1.56
BRCA1-216ENST00000484087 SERTM2A0A1B0GWG4 89 aa5.31□□□□□ -1.56
BRCA1-216ENST00000484087 A0A1W2PPQ1 181 aa5.31□□□□□ -1.56
BRCA1-216ENST00000484087 GCGP01275 180 aa5.31□□□□□ -1.56
BRCA1-216ENST00000484087 TCRAP04437 139 aa5.31□□□□□ -1.56
BRCA1-216ENST00000484087 PFN1P07737 140 aaKnown RBP5.31□□□□□ -1.56
BRCA1-216ENST00000484087 SNRPCP09234 159 aaKnown RBP5.31□□□□□ -1.56
BRCA1-216ENST00000484087 CXCL1P09341 107 aa5.31□□□□□ -1.56
BRCA1-216ENST00000484087 IGLC2P0DOY2 106 aa5.31□□□□□ -1.56
BRCA1-216ENST00000484087 PPIFP30405 207 aaKnown RBP5.31□□□□□ -1.56
BRCA1-216ENST00000484087 HOXD3P31249 432 aaPredicted RBP5.31□□□□□ -1.56
BRCA1-216ENST00000484087 ADMP35318 185 aa5.31□□□□□ -1.56
BRCA1-216ENST00000484087 ARL3P36405 182 aa5.31□□□□□ -1.56
BRCA1-216ENST00000484087 MEOX2P50222 304 aa5.31□□□□□ -1.56
BRCA1-216ENST00000484087 BEAN1Q3B7T3 259 aa5.31□□□□□ -1.56
BRCA1-216ENST00000484087 C19orf54Q5BKX5 351 aa5.31□□□□□ -1.56
BRCA1-216ENST00000484087 IBA57Q5T440 356 aaKnown RBP5.31□□□□□ -1.56
BRCA1-216ENST00000484087 OSTCQ9NRP0 149 aa5.31□□□□□ -1.56
BRCA1-216ENST00000484087 FBLL1A6NHQ2 334 aaKnown RBP5.3□□□□□ -1.56
BRCA1-216ENST00000484087 ZNF785A8K8V0 405 aa5.3□□□□□ -1.56
BRCA1-216ENST00000484087 H3BTX0 84 aa5.3□□□□□ -1.56
BRCA1-216ENST00000484087 ZNF561-AS1K7EIQ3 104 aa5.3□□□□□ -1.56
BRCA1-216ENST00000484087 K7EN84 100 aa5.3□□□□□ -1.56
BRCA1-216ENST00000484087 ISLRO14498 428 aa5.3□□□□□ -1.56
BRCA1-216ENST00000484087 GGCTO75223 188 aaKnown RBP5.3□□□□□ -1.56
BRCA1-216ENST00000484087 ZNF253O75346 499 aa5.3□□□□□ -1.56
BRCA1-216ENST00000484087 FAM3BP58499 235 aaPredicted RBP5.3□□□□□ -1.56
BRCA1-216ENST00000484087 GNG5P63218 68 aa5.3□□□□□ -1.56
BRCA1-216ENST00000484087 ODF1Q14990 250 aa5.3□□□□□ -1.56
BRCA1-216ENST00000484087 RPEL1Q2QD12 228 aa5.3□□□□□ -1.56
BRCA1-216ENST00000484087 C1orf194Q5T5A4 169 aa5.3□□□□□ -1.56
BRCA1-216ENST00000484087 ZFP82Q8N141 532 aa5.3□□□□□ -1.56
BRCA1-216ENST00000484087 ARL6IP6Q8N6S5 226 aa5.3□□□□□ -1.56
BRCA1-216ENST00000484087 LINC00482Q8N8I6 264 aa5.3□□□□□ -1.56
BRCA1-216ENST00000484087 DAZAP1Q96EP5 407 aaKnown RBP5.3□□□□□ -1.56
BRCA1-216ENST00000484087 GRAMD2BQ96HH9 432 aa5.3□□□□□ -1.56
BRCA1-216ENST00000484087 ZNF414Q96IQ9 312 aa5.3□□□□□ -1.56
BRCA1-216ENST00000484087 RAX2Q96IS3 184 aa5.3□□□□□ -1.56
BRCA1-216ENST00000484087 IGF2BP2-AS1Q96M15 143 aa5.3□□□□□ -1.56
BRCA1-216ENST00000484087 SRD5A3Q9H8P0 318 aa5.3□□□□□ -1.56
BRCA1-216ENST00000484087 IL36BQ9NZH7 164 aa5.3□□□□□ -1.56
BRCA1-216ENST00000484087 KLF12Q9Y4X4 402 aa5.3□□□□□ -1.56
BRCA1-216ENST00000484087 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP5.29□□□□□ -1.56
BRCA1-216ENST00000484087 TRAV34A0A0B4J273 112 aa5.29□□□□□ -1.56
BRCA1-216ENST00000484087 IGHV3-35A0A0C4DH35 117 aa5.29□□□□□ -1.56
BRCA1-216ENST00000484087 A0A1W2PS18 150 aa5.29□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 57.6 ms