RNA–Protein interactions for RNA: ENST00000483925.1

PTCD3-214, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 3

Gene PTCD3, Length 576 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-214ENST00000483925 PRO2289Q9P1D8 64 aa2.49□□□□□ -2.01
PTCD3-214ENST00000483925 METTL1Q9UBP6 276 aaKnown RBP2.49□□□□□ -2.01
PTCD3-214ENST00000483925 NUP98P52948 1817 aa2.49□□□□□ -2.01
PTCD3-214ENST00000483925 SYNJ1O43426 1573 aa2.49□□□□□ -2.01
PTCD3-214ENST00000483925 LCTP09848 1927 aa2.48□□□□□ -2.01
PTCD3-214ENST00000483925 FER1L6Q2WGJ9 1857 aa2.48□□□□□ -2.01
PTCD3-214ENST00000483925 COL1A1P02452 1464 aaPredicted RBP2.48□□□□□ -2.01
PTCD3-214ENST00000483925 SLX4Q8IY92 1834 aa2.48□□□□□ -2.01
PTCD3-214ENST00000483925 IGLV10-54A0A075B6I4 117 aa2.48□□□□□ -2.01
PTCD3-214ENST00000483925 TRAV1-1A0A0B4J248 108 aa2.48□□□□□ -2.01
PTCD3-214ENST00000483925 A0A0G2JMM0 328 aa2.48□□□□□ -2.01
PTCD3-214ENST00000483925 A0A1W2PPB8 328 aa2.48□□□□□ -2.01
PTCD3-214ENST00000483925 KIR3DP1A8MWS1 328 aa2.48□□□□□ -2.01
PTCD3-214ENST00000483925 FNDC10F2Z333 226 aa2.48□□□□□ -2.01
PTCD3-214ENST00000483925 CORTO00230 105 aa2.48□□□□□ -2.01
PTCD3-214ENST00000483925 UBL3O95164 117 aa2.48□□□□□ -2.01
PTCD3-214ENST00000483925 CCL4P13236 92 aa2.48□□□□□ -2.01
PTCD3-214ENST00000483925 BLCAPP62952 87 aa2.48□□□□□ -2.01
PTCD3-214ENST00000483925 SS18Q15532 418 aa2.48□□□□□ -2.01
PTCD3-214ENST00000483925 ASB16-AS1Q495Z4 193 aa2.48□□□□□ -2.01
PTCD3-214ENST00000483925 KRTAP13-2Q52LG2 175 aa2.48□□□□□ -2.01
PTCD3-214ENST00000483925 SCIMPQ6UWF3 145 aa2.48□□□□□ -2.01
PTCD3-214ENST00000483925 Q8N814 137 aa2.48□□□□□ -2.01
PTCD3-214ENST00000483925 ZNF436-AS1Q8NC38 126 aaPredicted RBP2.48□□□□□ -2.01
PTCD3-214ENST00000483925 OR5AK2Q8NH90 309 aa2.48□□□□□ -2.01
PTCD3-214ENST00000483925 TMEM254Q8TBM7 123 aa2.48□□□□□ -2.01
PTCD3-214ENST00000483925 MUCL1Q96DR8 90 aa2.48□□□□□ -2.01
PTCD3-214ENST00000483925 C20orf166-AS1Q96NR2 134 aa2.48□□□□□ -2.01
PTCD3-214ENST00000483925 RERGLQ9H628 205 aa2.48□□□□□ -2.01
PTCD3-214ENST00000483925 CCL26Q9Y258 94 aa2.48□□□□□ -2.01
PTCD3-214ENST00000483925 DNAJC15Q9Y5T4 150 aa2.48□□□□□ -2.01
PTCD3-214ENST00000483925 ZNF407Q9C0G0 2248 aa2.48□□□□□ -2.01
PTCD3-214ENST00000483925 SLIT2O94813 1529 aa2.47□□□□□ -2.01
PTCD3-214ENST00000483925 SPEF2Q9C093 1822 aa2.47□□□□□ -2.01
PTCD3-214ENST00000483925 COL16A1Q07092 1604 aaPredicted RBP2.47□□□□□ -2.01
PTCD3-214ENST00000483925 N4BP2Q86UW6 1770 aaPredicted RBP2.47□□□□□ -2.01
PTCD3-214ENST00000483925 MYH7BA7E2Y1 1941 aa2.47□□□□□ -2.01
PTCD3-214ENST00000483925 TRBV20-1A0A075B6N2 111 aa2.47□□□□□ -2.01
PTCD3-214ENST00000483925 C20orf202A1L168 122 aa2.47□□□□□ -2.01
PTCD3-214ENST00000483925 IBA57-AS1B1ANH7 110 aa2.47□□□□□ -2.01
PTCD3-214ENST00000483925 ZNF737O75373 536 aa2.47□□□□□ -2.01
PTCD3-214ENST00000483925 CRPP02741 224 aa2.47□□□□□ -2.01
PTCD3-214ENST00000483925 PYYP10082 97 aa2.47□□□□□ -2.01
PTCD3-214ENST00000483925 SLC25A4P12235 298 aa2.47□□□□□ -2.01
PTCD3-214ENST00000483925 ETV6P41212 452 aa2.47□□□□□ -2.01
PTCD3-214ENST00000483925 CDK6Q00534 326 aa2.47□□□□□ -2.01
PTCD3-214ENST00000483925 CIRBPQ14011 172 aaKnown RBP2.47□□□□□ -2.01
PTCD3-214ENST00000483925 LINC00311Q8N616 119 aa2.47□□□□□ -2.01
PTCD3-214ENST00000483925 COPS9Q8WXC6 57 aa2.47□□□□□ -2.01
PTCD3-214ENST00000483925 C14orf144Q96I85 54 aa2.47□□□□□ -2.01
PTCD3-214ENST00000483925 PPP3R2Q96LZ3 170 aa2.47□□□□□ -2.01
PTCD3-214ENST00000483925 SDF2Q99470 211 aa2.47□□□□□ -2.01
PTCD3-214ENST00000483925 FKBP11Q9NYL4 201 aa2.47□□□□□ -2.01
PTCD3-214ENST00000483925 PTPRSQ13332 1948 aa2.46□□□□□ -2.02
PTCD3-214ENST00000483925 IGKV2D-26A0A0A0MRZ7 120 aa2.46□□□□□ -2.02
PTCD3-214ENST00000483925 IGLV1-51P01701 117 aa2.46□□□□□ -2.02
PTCD3-214ENST00000483925 IGKV3-11P04433 115 aa2.46□□□□□ -2.02
PTCD3-214ENST00000483925 S100A8P05109 93 aa2.46□□□□□ -2.02
PTCD3-214ENST00000483925 ASAH2BP0C7U1 165 aa2.46□□□□□ -2.02
PTCD3-214ENST00000483925 AKAIN1P0CW23 69 aa2.46□□□□□ -2.02
PTCD3-214ENST00000483925 CKS2P33552 79 aa2.46□□□□□ -2.02
PTCD3-214ENST00000483925 RBP2P50120 134 aa2.46□□□□□ -2.02
PTCD3-214ENST00000483925 DSCR4P56555 118 aaPredicted RBP2.46□□□□□ -2.02
PTCD3-214ENST00000483925 RPL26P61254 145 aaKnown RBP2.46□□□□□ -2.02
PTCD3-214ENST00000483925 CLLU1Q5K131 121 aa2.46□□□□□ -2.02
PTCD3-214ENST00000483925 OR5AS1Q8N127 324 aa2.46□□□□□ -2.02
PTCD3-214ENST00000483925 C10orf111Q8N326 155 aa2.46□□□□□ -2.02
PTCD3-214ENST00000483925 RPL26L1Q9UNX3 145 aaKnown RBP2.46□□□□□ -2.02
PTCD3-214ENST00000483925 LHFPL6Q9Y693 200 aa2.46□□□□□ -2.02
PTCD3-214ENST00000483925 SMARCA4P51532 1647 aa2.46□□□□□ -2.02
PTCD3-214ENST00000483925 KIF26AQ9ULI4 1882 aaPredicted RBP2.45□□□□□ -2.02
PTCD3-214ENST00000483925 RGS12O14924 1447 aa2.45□□□□□ -2.02
PTCD3-214ENST00000483925 IGKV2-24A0A0C4DH68 120 aa2.45□□□□□ -2.02
PTCD3-214ENST00000483925 CD3DP04234 171 aa2.45□□□□□ -2.02
PTCD3-214ENST00000483925 SSR2P43308 183 aa2.45□□□□□ -2.02
PTCD3-214ENST00000483925 GNG4P50150 75 aa2.45□□□□□ -2.02
PTCD3-214ENST00000483925 ZNF846Q147U1 533 aa2.45□□□□□ -2.02
PTCD3-214ENST00000483925 MEIG1Q5JSS6 88 aa2.45□□□□□ -2.02
PTCD3-214ENST00000483925 LINC01545Q5VT33 79 aa2.45□□□□□ -2.02
PTCD3-214ENST00000483925 IGFL1Q6UW32 110 aa2.45□□□□□ -2.02
PTCD3-214ENST00000483925 KCNRGQ8N5I3 272 aa2.45□□□□□ -2.02
PTCD3-214ENST00000483925 PP6455Q8WZ26 134 aa2.45□□□□□ -2.02
PTCD3-214ENST00000483925 RAB37Q96AX2 223 aa2.45□□□□□ -2.02
PTCD3-214ENST00000483925 NAA38Q9BRA0 125 aaKnown RBP2.45□□□□□ -2.02
PTCD3-214ENST00000483925 SNRNP25Q9BV90 132 aaKnown RBP2.45□□□□□ -2.02
PTCD3-214ENST00000483925 CST11Q9H112 138 aa2.45□□□□□ -2.02
PTCD3-214ENST00000483925 CST9LQ9H4G1 147 aa2.45□□□□□ -2.02
PTCD3-214ENST00000483925 MPC1Q9Y5U8 109 aa2.45□□□□□ -2.02
PTCD3-214ENST00000483925 SBF1O95248 1867 aa2.45□□□□□ -2.02
PTCD3-214ENST00000483925 MBD5Q9P267 1494 aa2.45□□□□□ -2.02
PTCD3-214ENST00000483925 ERBINQ96RT1 1412 aa2.44□□□□□ -2.02
PTCD3-214ENST00000483925 PLXNB1O43157 2135 aa2.44□□□□□ -2.02
PTCD3-214ENST00000483925 E7EQL1 145 aa2.44□□□□□ -2.02
PTCD3-214ENST00000483925 E7EUB6 86 aa2.44□□□□□ -2.02
PTCD3-214ENST00000483925 CD14P08571 375 aa2.44□□□□□ -2.02
PTCD3-214ENST00000483925 BTG2P78543 158 aa2.44□□□□□ -2.02
PTCD3-214ENST00000483925 CCSMST1Q4G0I0 132 aa2.44□□□□□ -2.02
PTCD3-214ENST00000483925 C1orf134Q5TEV5 83 aa2.44□□□□□ -2.02
PTCD3-214ENST00000483925 C2orf82Q6UX34 121 aa2.44□□□□□ -2.02
PTCD3-214ENST00000483925 ARPINQ7Z6K5 226 aa2.44□□□□□ -2.02
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms