RNA–Protein interactions for RNA: ENST00000483876.1

COL17A1-206, Transcript of collagen type XVII alpha 1 chain, humanhuman

TSL 5

Gene COL17A1, Length 622 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL17A1-206ENST00000483876 GALR1P47211 349 aa4.16□□□□□ -1.74
COL17A1-206ENST00000483876 TPPP2P59282 170 aa4.16□□□□□ -1.74
COL17A1-206ENST00000483876 ERVFC1-1P60608 527 aa4.16□□□□□ -1.74
COL17A1-206ENST00000483876 RPL15P61313 204 aaKnown RBP4.16□□□□□ -1.74
COL17A1-206ENST00000483876 SLC35B1P78383 322 aa4.16□□□□□ -1.74
COL17A1-206ENST00000483876 FOXE3Q13461 319 aa4.16□□□□□ -1.74
COL17A1-206ENST00000483876 COX19Q49B96 90 aa4.16□□□□□ -1.74
COL17A1-206ENST00000483876 CENPWQ5EE01 88 aa4.16□□□□□ -1.74
COL17A1-206ENST00000483876 LEMD1Q68G75 181 aa4.16□□□□□ -1.74
COL17A1-206ENST00000483876 SIGLEC15Q6ZMC9 328 aa4.16□□□□□ -1.74
COL17A1-206ENST00000483876 GPHB5Q86YW7 130 aa4.16□□□□□ -1.74
COL17A1-206ENST00000483876 TMEM183AQ8IXX5 376 aa4.16□□□□□ -1.74
COL17A1-206ENST00000483876 TMEM75Q8N9X5 138 aa4.16□□□□□ -1.74
COL17A1-206ENST00000483876 MYOZ3Q8TDC0 251 aa4.16□□□□□ -1.74
COL17A1-206ENST00000483876 BLNKQ8WV28 456 aa4.16□□□□□ -1.74
COL17A1-206ENST00000483876 WFDC12Q8WWY7 111 aa4.16□□□□□ -1.74
COL17A1-206ENST00000483876 AAMDCQ9H7C9 122 aa4.16□□□□□ -1.74
COL17A1-206ENST00000483876 SRD5A3Q9H8P0 318 aa4.16□□□□□ -1.74
COL17A1-206ENST00000483876 IL36BQ9NZH7 164 aa4.16□□□□□ -1.74
COL17A1-206ENST00000483876 S4R3C0 116 aa4.16□□□□□ -1.74
COL17A1-206ENST00000483876 DYNC2H1Q8NCM8 4307 aaKnown RBP4.16□□□□□ -1.74
COL17A1-206ENST00000483876 TGIF2-C20orf24A0A0A6YYL0 155 aa4.15□□□□□ -1.75
COL17A1-206ENST00000483876 RBAKDNA6NC62 111 aa4.15□□□□□ -1.75
COL17A1-206ENST00000483876 DIRC3C9JPN6 131 aa4.15□□□□□ -1.75
COL17A1-206ENST00000483876 PPP5D1E7EU14 171 aa4.15□□□□□ -1.75
COL17A1-206ENST00000483876 K7EN84 100 aa4.15□□□□□ -1.75
COL17A1-206ENST00000483876 HOXA3O43365 443 aaPredicted RBP4.15□□□□□ -1.75
COL17A1-206ENST00000483876 IGLV2-11P01706 119 aa4.15□□□□□ -1.75
COL17A1-206ENST00000483876 IGHV3-23P01764 117 aa4.15□□□□□ -1.75
COL17A1-206ENST00000483876 CXCL1P09341 107 aa4.15□□□□□ -1.75
COL17A1-206ENST00000483876 PF4V1P10720 104 aa4.15□□□□□ -1.75
COL17A1-206ENST00000483876 RPS10P46783 165 aaKnown RBP4.15□□□□□ -1.75
COL17A1-206ENST00000483876 CSN1S1P47710 185 aa4.15□□□□□ -1.75
COL17A1-206ENST00000483876 FAM3BP58499 235 aaPredicted RBP4.15□□□□□ -1.75
COL17A1-206ENST00000483876 UBE2G1P62253 170 aa4.15□□□□□ -1.75
COL17A1-206ENST00000483876 FAM106AQ4KMX7 169 aa4.15□□□□□ -1.75
COL17A1-206ENST00000483876 CT83Q5H943 113 aa4.15□□□□□ -1.75
COL17A1-206ENST00000483876 SAPCD1Q5SSQ6 148 aa4.15□□□□□ -1.75
COL17A1-206ENST00000483876 Q6ZS46 218 aa4.15□□□□□ -1.75
COL17A1-206ENST00000483876 OR4X2Q8NGF9 303 aa4.15□□□□□ -1.75
COL17A1-206ENST00000483876 MRPL53Q96EL3 112 aaKnown RBP4.15□□□□□ -1.75
COL17A1-206ENST00000483876 GRAMD2BQ96HH9 432 aa4.15□□□□□ -1.75
COL17A1-206ENST00000483876 UBE2E2Q96LR5 201 aa4.15□□□□□ -1.75
COL17A1-206ENST00000483876 LINC00479Q96M42 142 aa4.15□□□□□ -1.75
COL17A1-206ENST00000483876 NOL4LQ96MY1 436 aaPredicted RBP4.15□□□□□ -1.75
COL17A1-206ENST00000483876 SLC50A1Q9BRV3 221 aa4.15□□□□□ -1.75
COL17A1-206ENST00000483876 KLK15Q9H2R5 256 aa4.15□□□□□ -1.75
COL17A1-206ENST00000483876 ZNF331Q9NQX6 463 aaPredicted RBP4.15□□□□□ -1.75
COL17A1-206ENST00000483876 PPP1R14DQ9NXH3 145 aa4.15□□□□□ -1.75
COL17A1-206ENST00000483876 ZNF492Q9P255 531 aa4.15□□□□□ -1.75
COL17A1-206ENST00000483876 PEF1Q9UBV8 284 aaKnown RBP4.15□□□□□ -1.75
COL17A1-206ENST00000483876 SMAD5-AS1Q9Y6J3 95 aa4.15□□□□□ -1.75
COL17A1-206ENST00000483876 URGCP-MRPS24S4R325 110 aa4.15□□□□□ -1.75
COL17A1-206ENST00000483876 V9GYV3 84 aa4.15□□□□□ -1.75
COL17A1-206ENST00000483876 DNAH1Q9P2D7 4330 aa4.14□□□□□ -1.75
COL17A1-206ENST00000483876 SMIM27A0A1W2PRY6 76 aa4.14□□□□□ -1.75
COL17A1-206ENST00000483876 PGPEP1LA6NFU8 196 aa4.14□□□□□ -1.75
COL17A1-206ENST00000483876 C5orf52A6NGY3 159 aa4.14□□□□□ -1.75
COL17A1-206ENST00000483876 ZNF785A8K8V0 405 aa4.14□□□□□ -1.75
COL17A1-206ENST00000483876 G3V4G9 280 aa4.14□□□□□ -1.75
COL17A1-206ENST00000483876 PHOX2AO14813 284 aa4.14□□□□□ -1.75
COL17A1-206ENST00000483876 BMI1P35226 326 aa4.14□□□□□ -1.75
COL17A1-206ENST00000483876 FOXA3P55318 350 aaPredicted RBP4.14□□□□□ -1.75
COL17A1-206ENST00000483876 PSG3Q16557 428 aa4.14□□□□□ -1.75
COL17A1-206ENST00000483876 IBA57Q5T440 356 aaKnown RBP4.14□□□□□ -1.75
COL17A1-206ENST00000483876 SAMD13Q5VXD3 122 aa4.14□□□□□ -1.75
COL17A1-206ENST00000483876 RASL11AQ6T310 242 aa4.14□□□□□ -1.75
COL17A1-206ENST00000483876 C16orf54Q6UWD8 224 aa4.14□□□□□ -1.75
COL17A1-206ENST00000483876 EXOC3-AS1Q8N2X6 119 aa4.14□□□□□ -1.75
COL17A1-206ENST00000483876 NUDT10Q8NFP7 164 aa4.14□□□□□ -1.75
COL17A1-206ENST00000483876 NUDT11Q96G61 164 aa4.14□□□□□ -1.75
COL17A1-206ENST00000483876 C17orf77Q96MU5 243 aa4.14□□□□□ -1.75
COL17A1-206ENST00000483876 GFRA4Q9GZZ7 299 aa4.14□□□□□ -1.75
COL17A1-206ENST00000483876 SAV1Q9H4B6 383 aaPredicted RBP4.14□□□□□ -1.75
COL17A1-206ENST00000483876 ZNF702PQ9H963 129 aa4.14□□□□□ -1.75
COL17A1-206ENST00000483876 GNB4Q9HAV0 340 aa4.14□□□□□ -1.75
COL17A1-206ENST00000483876 LINC00527Q9UJ94 153 aa4.14□□□□□ -1.75
COL17A1-206ENST00000483876 TRAV34A0A0B4J273 112 aa4.13□□□□□ -1.75
COL17A1-206ENST00000483876 A0A1W2PPQ1 181 aa4.13□□□□□ -1.75
COL17A1-206ENST00000483876 C19orf71A6NCJ1 209 aa4.13□□□□□ -1.75
COL17A1-206ENST00000483876 A8MWL6 223 aa4.13□□□□□ -1.75
COL17A1-206ENST00000483876 NPIPB6E9PJ23 425 aa4.13□□□□□ -1.75
COL17A1-206ENST00000483876 LGALS9O00182 355 aa4.13□□□□□ -1.75
COL17A1-206ENST00000483876 GATCO43716 136 aaKnown RBP4.13□□□□□ -1.75
COL17A1-206ENST00000483876 TRGC2P03986 189 aa4.13□□□□□ -1.75
COL17A1-206ENST00000483876 S100A6P06703 90 aa4.13□□□□□ -1.75
COL17A1-206ENST00000483876 CDX1P47902 265 aaPredicted RBP4.13□□□□□ -1.75
COL17A1-206ENST00000483876 GNG5P63218 68 aa4.13□□□□□ -1.75
COL17A1-206ENST00000483876 OR5I1Q13606 314 aa4.13□□□□□ -1.75
COL17A1-206ENST00000483876 RPEL1Q2QD12 228 aa4.13□□□□□ -1.75
COL17A1-206ENST00000483876 KPRPQ5T749 579 aaPredicted RBP4.13□□□□□ -1.75
COL17A1-206ENST00000483876 LCN12Q6JVE5 192 aa4.13□□□□□ -1.75
COL17A1-206ENST00000483876 GOLT1AQ6ZVE7 132 aa4.13□□□□□ -1.75
COL17A1-206ENST00000483876 SIGLECL1Q8N7X8 197 aa4.13□□□□□ -1.75
COL17A1-206ENST00000483876 OR4B1Q8NGF8 309 aa4.13□□□□□ -1.75
COL17A1-206ENST00000483876 WIPF2Q8TF74 440 aaPredicted RBP4.13□□□□□ -1.75
COL17A1-206ENST00000483876 TSKUQ8WUA8 353 aa4.13□□□□□ -1.75
COL17A1-206ENST00000483876 GLMPQ8WWB7 406 aa4.13□□□□□ -1.75
COL17A1-206ENST00000483876 DAZAP1Q96EP5 407 aaKnown RBP4.13□□□□□ -1.75
COL17A1-206ENST00000483876 GNB1LQ9BYB4 327 aa4.13□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 78.7 ms