RNA–Protein interactions for RNA: ENST00000483212.1

USP4-210, Transcript of ubiquitin specific peptidase 4, humanhuman

TSL 2

Gene USP4, Length 727 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP4-210ENST00000483212 F6UZH7 168 aa6.18□□□□□ -1.42
USP4-210ENST00000483212 TSPAN4O14817 238 aa6.18□□□□□ -1.42
USP4-210ENST00000483212 PDE6DO43924 150 aa6.18□□□□□ -1.42
USP4-210ENST00000483212 ATP6V1G1O75348 118 aa6.18□□□□□ -1.42
USP4-210ENST00000483212 IGLV1-51P01701 117 aa6.18□□□□□ -1.42
USP4-210ENST00000483212 SFTA3P0C7M3 94 aa6.18□□□□□ -1.42
USP4-210ENST00000483212 CD300EQ496F6 205 aaPredicted RBP6.18□□□□□ -1.42
USP4-210ENST00000483212 C10orf91Q5T1B1 145 aa6.18□□□□□ -1.42
USP4-210ENST00000483212 FAM24BQ8N5W8 94 aa6.18□□□□□ -1.42
USP4-210ENST00000483212 RNF182Q8N6D2 247 aa6.18□□□□□ -1.42
USP4-210ENST00000483212 ARL6IP6Q8N6S5 226 aa6.18□□□□□ -1.42
USP4-210ENST00000483212 C3orf56Q8N813 242 aa6.18□□□□□ -1.42
USP4-210ENST00000483212 C5orf17Q8NAS9 161 aa6.18□□□□□ -1.42
USP4-210ENST00000483212 WFDC9Q8NEX5 89 aa6.18□□□□□ -1.42
USP4-210ENST00000483212 MRPL53Q96EL3 112 aaKnown RBP6.18□□□□□ -1.42
USP4-210ENST00000483212 LINC00052Q96N35 136 aa6.18□□□□□ -1.42
USP4-210ENST00000483212 MDFIQ99750 246 aa6.18□□□□□ -1.42
USP4-210ENST00000483212 MS4A6AQ9H2W1 248 aa6.18□□□□□ -1.42
USP4-210ENST00000483212 EPDR1Q9UM22 224 aa6.18□□□□□ -1.42
USP4-210ENST00000483212 IGKV3-7A0A075B6H7 116 aa6.17□□□□□ -1.42
USP4-210ENST00000483212 TRAV25A0A0B4J276 109 aa6.17□□□□□ -1.42
USP4-210ENST00000483212 DIRC3C9JPN6 131 aa6.17□□□□□ -1.42
USP4-210ENST00000483212 PRAC2D3DTV9 90 aa6.17□□□□□ -1.42
USP4-210ENST00000483212 PEX7O00628 323 aa6.17□□□□□ -1.42
USP4-210ENST00000483212 ISLRO14498 428 aa6.17□□□□□ -1.42
USP4-210ENST00000483212 TCRAP04437 139 aa6.17□□□□□ -1.42
USP4-210ENST00000483212 SLC25A5P05141 298 aaKnown RBP6.17□□□□□ -1.42
USP4-210ENST00000483212 GBGT1Q8N5D6 347 aa6.17□□□□□ -1.42
USP4-210ENST00000483212 DYNLRB2Q8TF09 96 aa6.17□□□□□ -1.42
USP4-210ENST00000483212 HIST1H2BAQ96A08 127 aa6.17□□□□□ -1.42
USP4-210ENST00000483212 C16orf92Q96LL3 132 aa6.17□□□□□ -1.42
USP4-210ENST00000483212 ATG101Q9BSB4 218 aa6.17□□□□□ -1.42
USP4-210ENST00000483212 DERL1Q9BUN8 251 aa6.17□□□□□ -1.42
USP4-210ENST00000483212 PARLQ9H300 379 aa6.17□□□□□ -1.42
USP4-210ENST00000483212 PRELID1Q9Y255 219 aa6.17□□□□□ -1.42
USP4-210ENST00000483212 ZNF256Q9Y2P7 627 aaPredicted RBP6.17□□□□□ -1.42
USP4-210ENST00000483212 CARHSP1Q9Y2V2 147 aaKnown RBP6.17□□□□□ -1.42
USP4-210ENST00000483212 KLF12Q9Y4X4 402 aa6.17□□□□□ -1.42
USP4-210ENST00000483212 TRBV20OR9-2A0A075B6H5 130 aa6.16□□□□□ -1.42
USP4-210ENST00000483212 TRBV6-1A0A0K0K1D8 114 aa6.16□□□□□ -1.42
USP4-210ENST00000483212 ZNF705FA8MVS1 300 aaPredicted RBP6.16□□□□□ -1.42
USP4-210ENST00000483212 SAP30O75446 220 aa6.16□□□□□ -1.42
USP4-210ENST00000483212 IGLV2-11P01706 119 aa6.16□□□□□ -1.42
USP4-210ENST00000483212 PRB4P10163 310 aaPredicted RBP6.16□□□□□ -1.42
USP4-210ENST00000483212 RPL11P62913 178 aaKnown RBP6.16□□□□□ -1.42
USP4-210ENST00000483212 PSG3Q16557 428 aa6.16□□□□□ -1.42
USP4-210ENST00000483212 SAMD13Q5VXD3 122 aa6.16□□□□□ -1.42
USP4-210ENST00000483212 LCN12Q6JVE5 192 aa6.16□□□□□ -1.42
USP4-210ENST00000483212 OR2K2Q8NGT1 345 aa6.16□□□□□ -1.42
USP4-210ENST00000483212 IGF2BP2-AS1Q96M15 143 aa6.16□□□□□ -1.42
USP4-210ENST00000483212 LINC00479Q96M42 142 aa6.16□□□□□ -1.42
USP4-210ENST00000483212 SPAG8Q99932 426 aaPredicted RBP6.16□□□□□ -1.42
USP4-210ENST00000483212 SEC11CQ9BY50 192 aa6.16□□□□□ -1.42
USP4-210ENST00000483212 KRTAP4-2Q9BYR5 136 aa6.16□□□□□ -1.42
USP4-210ENST00000483212 AAMDCQ9H7C9 122 aa6.16□□□□□ -1.42
USP4-210ENST00000483212 CLEC5AQ9NY25 188 aa6.16□□□□□ -1.42
USP4-210ENST00000483212 SERTM2A0A1B0GWG4 89 aa6.15□□□□□ -1.42
USP4-210ENST00000483212 KRBOX1C9JBD0 128 aa6.15□□□□□ -1.42
USP4-210ENST00000483212 AKR1C3P42330 323 aa6.15□□□□□ -1.42
USP4-210ENST00000483212 RPL35P42766 123 aaKnown RBP6.15□□□□□ -1.42
USP4-210ENST00000483212 TFPI2P48307 235 aa6.15□□□□□ -1.42
USP4-210ENST00000483212 DEFB1P60022 68 aa6.15□□□□□ -1.42
USP4-210ENST00000483212 TMEM183BQ1AE95 376 aa6.15□□□□□ -1.42
USP4-210ENST00000483212 SOHLH1Q5JUK2 328 aa6.15□□□□□ -1.42
USP4-210ENST00000483212 LCE1DQ5T752 114 aa6.15□□□□□ -1.42
USP4-210ENST00000483212 RBPMS2Q6ZRY4 209 aaKnown RBP6.15□□□□□ -1.42
USP4-210ENST00000483212 GOLT1AQ6ZVE7 132 aa6.15□□□□□ -1.42
USP4-210ENST00000483212 WFDC3Q8IUB2 231 aa6.15□□□□□ -1.42
USP4-210ENST00000483212 TMEM75Q8N9X5 138 aa6.15□□□□□ -1.42
USP4-210ENST00000483212 CMTM2Q8TAZ6 248 aa6.15□□□□□ -1.42
USP4-210ENST00000483212 RPUSD4Q96CM3 377 aaKnown RBP6.15□□□□□ -1.42
USP4-210ENST00000483212 IGKV2-40A0A087WW87 121 aaPredicted RBP6.14□□□□□ -1.43
USP4-210ENST00000483212 TRAV8-1A0A0A6YYK1 113 aa6.14□□□□□ -1.43
USP4-210ENST00000483212 TRAV34A0A0B4J273 112 aa6.14□□□□□ -1.43
USP4-210ENST00000483212 RBAKDNA6NC62 111 aa6.14□□□□□ -1.43
USP4-210ENST00000483212 C9JCJ5 164 aa6.14□□□□□ -1.43
USP4-210ENST00000483212 F8W036 122 aa6.14□□□□□ -1.43
USP4-210ENST00000483212 DNASE2O00115 360 aaPredicted RBP6.14□□□□□ -1.43
USP4-210ENST00000483212 IGKV2D-40P01614 121 aaPredicted RBP6.14□□□□□ -1.43
USP4-210ENST00000483212 IGLV2-8P01709 118 aa6.14□□□□□ -1.43
USP4-210ENST00000483212 ZNF688P0C7X2 276 aa6.14□□□□□ -1.43
USP4-210ENST00000483212 INSL3P51460 131 aa6.14□□□□□ -1.43
USP4-210ENST00000483212 CEBPGP53567 150 aa6.14□□□□□ -1.43
USP4-210ENST00000483212 TAS2R60P59551 318 aa6.14□□□□□ -1.43
USP4-210ENST00000483212 PAFAH1B2P68402 229 aa6.14□□□□□ -1.43
USP4-210ENST00000483212 BEAN1Q3B7T3 259 aa6.14□□□□□ -1.43
USP4-210ENST00000483212 FAM74A3Q4VXF1 159 aa6.14□□□□□ -1.43
USP4-210ENST00000483212 C9orf66Q5T8R8 295 aa6.14□□□□□ -1.43
USP4-210ENST00000483212 Q86TA4 180 aa6.14□□□□□ -1.43
USP4-210ENST00000483212 VGLL1Q99990 258 aa6.14□□□□□ -1.43
USP4-210ENST00000483212 MAP6D1Q9H9H5 199 aa6.14□□□□□ -1.43
USP4-210ENST00000483212 RPH3ALQ9UNE2 315 aa6.14□□□□□ -1.43
USP4-210ENST00000483212 PGPEP1LA6NFU8 196 aa6.13□□□□□ -1.43
USP4-210ENST00000483212 OR4C46A6NHA9 309 aa6.13□□□□□ -1.43
USP4-210ENST00000483212 ZNF727A8MUV8 499 aa6.13□□□□□ -1.43
USP4-210ENST00000483212 NPIPB6E9PJ23 425 aa6.13□□□□□ -1.43
USP4-210ENST00000483212 F6UB75 175 aa6.13□□□□□ -1.43
USP4-210ENST00000483212 LTAP01374 205 aa6.13□□□□□ -1.43
USP4-210ENST00000483212 CD33P20138 364 aa6.13□□□□□ -1.43
USP4-210ENST00000483212 ID1P41134 155 aa6.13□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms