RNA–Protein interactions for RNA: ENST00000482519.1

VAMP4-204, Transcript of vesicle associated membrane protein 4, humanhuman

TSL 3

Gene VAMP4, Length 586 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP4-204ENST00000482519 BLNKQ8WV28 456 aa11.87□□□□□ -0.51
VAMP4-204ENST00000482519 SAT2Q96F10 170 aaPredicted RBP11.87□□□□□ -0.51
VAMP4-204ENST00000482519 KCNIP2Q9NS61 270 aa11.87□□□□□ -0.51
VAMP4-204ENST00000482519 HSPB11Q9Y547 144 aa11.87□□□□□ -0.51
VAMP4-204ENST00000482519 TIMM9Q9Y5J7 89 aa11.87□□□□□ -0.51
VAMP4-204ENST00000482519 DEFB131BA0A096LNP1 70 aa11.86□□□□□ -0.51
VAMP4-204ENST00000482519 C17orf112F2Z3M2 114 aa11.86□□□□□ -0.51
VAMP4-204ENST00000482519 HTN1P15515 57 aa11.86□□□□□ -0.51
VAMP4-204ENST00000482519 FAM222AQ5U5X8 452 aa11.86□□□□□ -0.51
VAMP4-204ENST00000482519 SCGB1C1Q8TD33 95 aa11.86□□□□□ -0.51
VAMP4-204ENST00000482519 LINC01587Q99440 93 aa11.86□□□□□ -0.51
VAMP4-204ENST00000482519 MED28Q9H204 178 aa11.86□□□□□ -0.51
VAMP4-204ENST00000482519 PLA2G2EQ9NZK7 142 aa11.86□□□□□ -0.51
VAMP4-204ENST00000482519 TMEM14CQ9P0S9 112 aa11.86□□□□□ -0.51
VAMP4-204ENST00000482519 YTHDF2Q9Y5A9 579 aaKnown RBP11.86□□□□□ -0.51
VAMP4-204ENST00000482519 TRBV19A0A075B6N1 114 aa11.85□□□□□ -0.51
VAMP4-204ENST00000482519 IFNA5P01569 189 aa11.85□□□□□ -0.51
VAMP4-204ENST00000482519 MIR17HGQ75NE6 70 aa11.85□□□□□ -0.51
VAMP4-204ENST00000482519 RPP25LQ8N5L8 163 aaKnown RBP11.85□□□□□ -0.51
VAMP4-204ENST00000482519 SLC25A2Q9BXI2 301 aa11.85□□□□□ -0.51
VAMP4-204ENST00000482519 PARD6GQ9BYG4 376 aaPredicted RBP11.85□□□□□ -0.51
VAMP4-204ENST00000482519 DKK2Q9UBU2 259 aa11.85□□□□□ -0.51
VAMP4-204ENST00000482519 HIST1H1EP10412 219 aaKnown RBP11.84□□□□□ -0.51
VAMP4-204ENST00000482519 CDKN1BP46527 198 aa11.84□□□□□ -0.51
VAMP4-204ENST00000482519 FCN2Q15485 313 aa11.84□□□□□ -0.51
VAMP4-204ENST00000482519 NIPSNAP3BQ9BS92 247 aa11.84□□□□□ -0.51
VAMP4-204ENST00000482519 APLNQ9ULZ1 77 aa11.84□□□□□ -0.51
VAMP4-204ENST00000482519 IGHV4-4A0A075B6R2 117 aa11.83□□□□□ -0.52
VAMP4-204ENST00000482519 J3KRW8 73 aa11.83□□□□□ -0.52
VAMP4-204ENST00000482519 HTN3P15516 51 aa11.83□□□□□ -0.52
VAMP4-204ENST00000482519 TCTAP57738 103 aa11.83□□□□□ -0.52
VAMP4-204ENST00000482519 FFAR4Q5NUL3 377 aa11.83□□□□□ -0.52
VAMP4-204ENST00000482519 LGALS9CQ6DKI2 356 aa11.83□□□□□ -0.52
VAMP4-204ENST00000482519 EXOC3-AS1Q8N2X6 119 aa11.83□□□□□ -0.52
VAMP4-204ENST00000482519 TEX48A0A1B0GUV7 120 aa11.82□□□□□ -0.52
VAMP4-204ENST00000482519 M0R3E3 92 aa11.82□□□□□ -0.52
VAMP4-204ENST00000482519 ZNF253O75346 499 aa11.82□□□□□ -0.52
VAMP4-204ENST00000482519 NDUFB4O95168 129 aa11.82□□□□□ -0.52
VAMP4-204ENST00000482519 OR10J4P0C629 311 aa11.82□□□□□ -0.52
VAMP4-204ENST00000482519 AZU1P20160 251 aa11.82□□□□□ -0.52
VAMP4-204ENST00000482519 TSPOP30536 169 aa11.82□□□□□ -0.52
VAMP4-204ENST00000482519 KIR3DS1Q14943 382 aa11.82□□□□□ -0.52
VAMP4-204ENST00000482519 FAM167A-AS1Q96KT0 104 aa11.82□□□□□ -0.52
VAMP4-204ENST00000482519 OR51M1Q9H341 326 aa11.82□□□□□ -0.52
VAMP4-204ENST00000482519 AAMDCQ9H7C9 122 aa11.82□□□□□ -0.52
VAMP4-204ENST00000482519 WFDC1Q9HC57 220 aa11.82□□□□□ -0.52
VAMP4-204ENST00000482519 FUT9Q9Y231 359 aa11.82□□□□□ -0.52
VAMP4-204ENST00000482519 CT45A10P0DMU9 189 aa11.81□□□□□ -0.52
VAMP4-204ENST00000482519 DAD1P61803 113 aa11.81□□□□□ -0.52
VAMP4-204ENST00000482519 PDE6HQ13956 83 aa11.81□□□□□ -0.52
VAMP4-204ENST00000482519 TMEM256Q8N2U0 113 aa11.81□□□□□ -0.52
VAMP4-204ENST00000482519 PAXXQ9BUH6 204 aa11.81□□□□□ -0.52
VAMP4-204ENST00000482519 MRPL32Q9BYC8 188 aaKnown RBP11.81□□□□□ -0.52
VAMP4-204ENST00000482519 NPIPB6E9PJ23 425 aa11.8□□□□□ -0.52
VAMP4-204ENST00000482519 OR7C2O60412 319 aa11.8□□□□□ -0.52
VAMP4-204ENST00000482519 NBEAP1P0C6P0 100 aa11.8□□□□□ -0.52
VAMP4-204ENST00000482519 TAS2R60P59551 318 aa11.8□□□□□ -0.52
VAMP4-204ENST00000482519 ERCC8Q13216 396 aa11.8□□□□□ -0.52
VAMP4-204ENST00000482519 ICAM4Q14773 271 aa11.8□□□□□ -0.52
VAMP4-204ENST00000482519 FAM122CQ6P4D5 195 aa11.8□□□□□ -0.52
VAMP4-204ENST00000482519 PRELID1Q9Y255 219 aa11.8□□□□□ -0.52
VAMP4-204ENST00000482519 DEFB130BP0DP73 79 aa11.79□□□□□ -0.52
VAMP4-204ENST00000482519 DEFB130AP0DP74 79 aa11.79□□□□□ -0.52
VAMP4-204ENST00000482519 LEPP41159 167 aa11.79□□□□□ -0.52
VAMP4-204ENST00000482519 GFI1BQ5VTD9 330 aa11.79□□□□□ -0.52
VAMP4-204ENST00000482519 RNF141Q8WVD5 230 aa11.79□□□□□ -0.52
VAMP4-204ENST00000482519 FXYD5Q96DB9 178 aa11.79□□□□□ -0.52
VAMP4-204ENST00000482519 MRPL53Q96EL3 112 aaKnown RBP11.79□□□□□ -0.52
VAMP4-204ENST00000482519 NDUFAF3Q9BU61 184 aa11.79□□□□□ -0.52
VAMP4-204ENST00000482519 TRAV12-3A0A0B4J271 114 aa11.78□□□□□ -0.52
VAMP4-204ENST00000482519 H7BYZ3 331 aa11.78□□□□□ -0.52
VAMP4-204ENST00000482519 EIF3GO75821 320 aaKnown RBP eCLIP11.78□□□□□ -0.52
VAMP4-204ENST00000482519 RGS21Q2M5E4 152 aa11.78□□□□□ -0.52
VAMP4-204ENST00000482519 EPPK1P58107 5090 aaKnown RBP11.78□□□□□ -0.52
VAMP4-204ENST00000482519 IGKV2-40A0A087WW87 121 aaPredicted RBP11.77□□□□□ -0.53
VAMP4-204ENST00000482519 IGKV2D-40P01614 121 aaPredicted RBP11.77□□□□□ -0.53
VAMP4-204ENST00000482519 RANP62826 216 aaKnown RBP11.77□□□□□ -0.53
VAMP4-204ENST00000482519 UBE2L3P68036 154 aaKnown RBP11.77□□□□□ -0.53
VAMP4-204ENST00000482519 OXA1LQ15070 435 aa11.77□□□□□ -0.53
VAMP4-204ENST00000482519 Q5BKY6 102 aa11.77□□□□□ -0.53
VAMP4-204ENST00000482519 PHYHIPLQ96FC7 376 aa11.77□□□□□ -0.53
VAMP4-204ENST00000482519 C16orf74Q96GX8 76 aa11.77□□□□□ -0.53
VAMP4-204ENST00000482519 LYRM9A8MSI8 78 aa11.76□□□□□ -0.53
VAMP4-204ENST00000482519 TAS2R45P59539 299 aa11.76□□□□□ -0.53
VAMP4-204ENST00000482519 ACOT6Q3I5F7 207 aaPredicted RBP11.76□□□□□ -0.53
VAMP4-204ENST00000482519 KHDC3LQ587J8 217 aa11.76□□□□□ -0.53
VAMP4-204ENST00000482519 CCDC28AQ8IWP9 274 aa11.76□□□□□ -0.53
VAMP4-204ENST00000482519 ODF3Q96PU9 254 aa11.76□□□□□ -0.53
VAMP4-204ENST00000482519 C20orf144Q9BQM9 153 aa11.76□□□□□ -0.53
VAMP4-204ENST00000482519 AGPAT4-IT1Q9H0P7 198 aa11.76□□□□□ -0.53
VAMP4-204ENST00000482519 A0A1W2PPV4 95 aa11.75□□□□□ -0.53
VAMP4-204ENST00000482519 PLAC8L1A1L4L8 177 aa11.75□□□□□ -0.53
VAMP4-204ENST00000482519 GIPP09681 153 aaPredicted RBP11.75□□□□□ -0.53
VAMP4-204ENST00000482519 HSD17B11Q8NBQ5 300 aa11.75□□□□□ -0.53
VAMP4-204ENST00000482519 ZNF503Q96F45 646 aa11.75□□□□□ -0.53
VAMP4-204ENST00000482519 LINC00477Q96M19 166 aa11.75□□□□□ -0.53
VAMP4-204ENST00000482519 VGLL1Q99990 258 aa11.75□□□□□ -0.53
VAMP4-204ENST00000482519 M6PRP20645 277 aa11.74□□□□□ -0.53
VAMP4-204ENST00000482519 RNASE4P34096 147 aaKnown RBP11.74□□□□□ -0.53
VAMP4-204ENST00000482519 CSN1S1P47710 185 aa11.74□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 72.5 ms