RNA–Protein interactions for RNA: ENST00000482507.5

ATG4B-220, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 1 (best)

Gene ATG4B, Length 2,414 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-220ENST00000482507 PSG3Q16557 428 aa11.66□□□□□ -0.54
ATG4B-220ENST00000482507 FANCD2OSQ96PS1 177 aa11.66□□□□□ -0.54
ATG4B-220ENST00000482507 NEU4Q8WWR8 484 aaPredicted RBP11.65□□□□□ -0.54
ATG4B-220ENST00000482507 NRGNQ92686 78 aa11.65□□□□□ -0.54
ATG4B-220ENST00000482507 DPM3Q9P2X0 92 aa11.65□□□□□ -0.54
ATG4B-220ENST00000482507 NDUFA3O95167 84 aa11.65□□□□□ -0.55
ATG4B-220ENST00000482507 NDPQ00604 133 aa11.65□□□□□ -0.55
ATG4B-220ENST00000482507 HIST2H2BCQ6DN03 193 aa11.65□□□□□ -0.55
ATG4B-220ENST00000482507 NPBQ8NG41 125 aa11.65□□□□□ -0.55
ATG4B-220ENST00000482507 OR11H6Q8NGC7 330 aa11.65□□□□□ -0.55
ATG4B-220ENST00000482507 ABCA12Q86UK0 2595 aa11.64□□□□□ -0.55
ATG4B-220ENST00000482507 PTPN13Q12923 2485 aa11.64□□□□□ -0.55
ATG4B-220ENST00000482507 TCF21O43680 179 aa11.64□□□□□ -0.55
ATG4B-220ENST00000482507 C11orf71Q6IPW1 123 aa11.64□□□□□ -0.55
ATG4B-220ENST00000482507 DYNAPQ8N1N2 210 aa11.64□□□□□ -0.55
ATG4B-220ENST00000482507 PMCHL2Q9BQD1 86 aa11.64□□□□□ -0.55
ATG4B-220ENST00000482507 LYPD1Q8N2G4 141 aa11.63□□□□□ -0.55
ATG4B-220ENST00000482507 TPPP3Q9BW30 176 aa11.63□□□□□ -0.55
ATG4B-220ENST00000482507 IGLV11-55A0A075B6I3 123 aa11.62□□□□□ -0.55
ATG4B-220ENST00000482507 H0Y8G0 127 aa11.62□□□□□ -0.55
ATG4B-220ENST00000482507 CCL25O15444 150 aa11.62□□□□□ -0.55
ATG4B-220ENST00000482507 IGHV3-23P01764 117 aa11.62□□□□□ -0.55
ATG4B-220ENST00000482507 FAM106CPP0CH98 169 aa11.62□□□□□ -0.55
ATG4B-220ENST00000482507 C5orf64Q2M2E5 130 aa11.62□□□□□ -0.55
ATG4B-220ENST00000482507 FAM106AQ4KMX7 169 aa11.62□□□□□ -0.55
ATG4B-220ENST00000482507 GATD1Q8NB37 220 aa11.62□□□□□ -0.55
ATG4B-220ENST00000482507 TIMM8BQ9Y5J9 83 aaPredicted RBP11.62□□□□□ -0.55
ATG4B-220ENST00000482507 ODF3BA8MYP8 253 aa11.62□□□□□ -0.55
ATG4B-220ENST00000482507 HES1Q14469 280 aa11.62□□□□□ -0.55
ATG4B-220ENST00000482507 ORAOV1Q8WV07 137 aa11.62□□□□□ -0.55
ATG4B-220ENST00000482507 ST20Q9HBF5 79 aa11.62□□□□□ -0.55
ATG4B-220ENST00000482507 GNG7O60262 68 aa11.61□□□□□ -0.55
ATG4B-220ENST00000482507 RIGQ13278 110 aa11.61□□□□□ -0.55
ATG4B-220ENST00000482507 RNF24Q9Y225 148 aa11.61□□□□□ -0.55
ATG4B-220ENST00000482507 COX11Q9Y6N1 276 aa11.61□□□□□ -0.55
ATG4B-220ENST00000482507 TMSB15BA0A087X1C1 80 aa11.61□□□□□ -0.55
ATG4B-220ENST00000482507 COX6B1P14854 86 aa11.61□□□□□ -0.55
ATG4B-220ENST00000482507 DTX2Q86UW9 622 aa11.61□□□□□ -0.55
ATG4B-220ENST00000482507 TMEM213A2RRL7 107 aa11.6□□□□□ -0.55
ATG4B-220ENST00000482507 K7EQM0 130 aa11.6□□□□□ -0.55
ATG4B-220ENST00000482507 NCR2O95944 276 aa11.6□□□□□ -0.55
ATG4B-220ENST00000482507 OR5AL1P0C617 328 aa11.6□□□□□ -0.55
ATG4B-220ENST00000482507 LOXL1Q08397 574 aaPredicted RBP11.6□□□□□ -0.55
ATG4B-220ENST00000482507 MPV17L2Q567V2 206 aa11.6□□□□□ -0.55
ATG4B-220ENST00000482507 MED13LQ71F56 2210 aa11.6□□□□□ -0.55
ATG4B-220ENST00000482507 IGKV2-40A0A087WW87 121 aaPredicted RBP11.6□□□□□ -0.55
ATG4B-220ENST00000482507 MUC21A0A0G2JKD1 596 aa11.6□□□□□ -0.55
ATG4B-220ENST00000482507 MUC21A0A140T8X8 626 aa11.6□□□□□ -0.55
ATG4B-220ENST00000482507 IGKV2D-40P01614 121 aaPredicted RBP11.6□□□□□ -0.55
ATG4B-220ENST00000482507 FOXE3Q13461 319 aa11.6□□□□□ -0.55
ATG4B-220ENST00000482507 MUC21Q5SSG8 566 aa11.6□□□□□ -0.55
ATG4B-220ENST00000482507 MAP1LC3CQ9BXW4 147 aa11.6□□□□□ -0.55
ATG4B-220ENST00000482507 RAB1BQ9H0U4 201 aa11.6□□□□□ -0.55
ATG4B-220ENST00000482507 NPIPB5A8MRT5 1133 aa11.59□□□□□ -0.55
ATG4B-220ENST00000482507 IGFL4Q6B9Z1 124 aa11.59□□□□□ -0.55
ATG4B-220ENST00000482507 LYZL1Q6UWQ5 148 aa11.59□□□□□ -0.55
ATG4B-220ENST00000482507 PET117Q6UWS5 81 aa11.59□□□□□ -0.55
ATG4B-220ENST00000482507 TMEM191AQ9H0A3 160 aa11.59□□□□□ -0.55
ATG4B-220ENST00000482507 SCRT2Q9NQ03 307 aa11.59□□□□□ -0.55
ATG4B-220ENST00000482507 LOC105371242A0A075B767 164 aa11.59□□□□□ -0.55
ATG4B-220ENST00000482507 A0A096LNJ9 63 aa11.59□□□□□ -0.55
ATG4B-220ENST00000482507 SH2D1AO60880 128 aa11.59□□□□□ -0.55
ATG4B-220ENST00000482507 MFAP4P55083 255 aa11.59□□□□□ -0.55
ATG4B-220ENST00000482507 ARPC1AQ92747 370 aa11.59□□□□□ -0.55
ATG4B-220ENST00000482507 ZNF747Q9BV97 191 aa11.59□□□□□ -0.55
ATG4B-220ENST00000482507 AP5S1Q9NUS5 200 aa11.59□□□□□ -0.55
ATG4B-220ENST00000482507 PRTN3P24158 256 aa11.58□□□□□ -0.56
ATG4B-220ENST00000482507 CEACAM3P40198 252 aa11.58□□□□□ -0.56
ATG4B-220ENST00000482507 IFI27P40305 119 aaPredicted RBP11.58□□□□□ -0.56
ATG4B-220ENST00000482507 PDE6HQ13956 83 aa11.58□□□□□ -0.56
ATG4B-220ENST00000482507 LINC01545Q5VT33 79 aa11.58□□□□□ -0.56
ATG4B-220ENST00000482507 ZNF562Q6V9R5 426 aa11.58□□□□□ -0.56
ATG4B-220ENST00000482507 ZNF493Q6ZR52 646 aa11.58□□□□□ -0.56
ATG4B-220ENST00000482507 IGHV3OR16-8A0A075B7F1 116 aa11.58□□□□□ -0.56
ATG4B-220ENST00000482507 OR2T8A6NH00 312 aa11.58□□□□□ -0.56
ATG4B-220ENST00000482507 NCBP2LA6PVI3 153 aaKnown RBP11.58□□□□□ -0.56
ATG4B-220ENST00000482507 IGHG4P01861 327 aa11.58□□□□□ -0.56
ATG4B-220ENST00000482507 HLA-DMBP28068 263 aa11.58□□□□□ -0.56
ATG4B-220ENST00000482507 KRTAP10-9P60411 292 aa11.58□□□□□ -0.56
ATG4B-220ENST00000482507 ZNF575Q86XF7 245 aa11.58□□□□□ -0.56
ATG4B-220ENST00000482507 C21orf62Q9NYP8 219 aa11.58□□□□□ -0.56
ATG4B-220ENST00000482507 HSPB8Q9UJY1 196 aa11.58□□□□□ -0.56
ATG4B-220ENST00000482507 SMAD5-AS1Q9Y6J3 95 aa11.58□□□□□ -0.56
ATG4B-220ENST00000482507 TRAV30A0A087WSZ9 112 aa11.57□□□□□ -0.56
ATG4B-220ENST00000482507 D6R8Y8 96 aa11.57□□□□□ -0.56
ATG4B-220ENST00000482507 M0R1W7 72 aa11.57□□□□□ -0.56
ATG4B-220ENST00000482507 EGR2P11161 476 aaPredicted RBP11.57□□□□□ -0.56
ATG4B-220ENST00000482507 ERASQ7Z444 233 aa11.57□□□□□ -0.56
ATG4B-220ENST00000482507 AMN1Q8IY45 258 aa11.57□□□□□ -0.56
ATG4B-220ENST00000482507 PIP4P2Q8N4L2 257 aa11.57□□□□□ -0.56
ATG4B-220ENST00000482507 TTC9CQ8N5M4 171 aa11.57□□□□□ -0.56
ATG4B-220ENST00000482507 Q8N6K4 173 aa11.57□□□□□ -0.56
ATG4B-220ENST00000482507 Q8TAT8 98 aa11.57□□□□□ -0.56
ATG4B-220ENST00000482507 ZNF48Q96MX3 618 aaPredicted RBP11.57□□□□□ -0.56
ATG4B-220ENST00000482507 AAMDCQ9H7C9 122 aa11.57□□□□□ -0.56
ATG4B-220ENST00000482507 SERTM2A0A1B0GWG4 89 aa11.57□□□□□ -0.56
ATG4B-220ENST00000482507 CT45A10P0DMU9 189 aa11.57□□□□□ -0.56
ATG4B-220ENST00000482507 ZNF80P51504 273 aaPredicted RBP11.57□□□□□ -0.56
ATG4B-220ENST00000482507 SLC25A34Q6PIV7 304 aa11.57□□□□□ -0.56
ATG4B-220ENST00000482507 ZNF738Q8NE65 137 aa11.57□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 47.4 ms