RNA–Protein interactions for RNA: ENST00000482251.2

CPSF4-212, Transcript of cleavage and polyadenylation specific factor 4, humanhuman

TSL 2

Gene CPSF4, Length 574 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4-212ENST00000482251 PFDN5Q99471 154 aa7.41□□□□□ -1.22
CPSF4-212ENST00000482251 ZNF586Q9NXT0 402 aa7.41□□□□□ -1.22
CPSF4-212ENST00000482251 OR5AC2Q9NZP5 309 aa7.41□□□□□ -1.22
CPSF4-212ENST00000482251 HECTD4Q9Y4D8 3996 aa7.41□□□□□ -1.22
CPSF4-212ENST00000482251 LYRM9A8MSI8 78 aa7.4□□□□□ -1.22
CPSF4-212ENST00000482251 PYYP10082 97 aa7.4□□□□□ -1.22
CPSF4-212ENST00000482251 RPL29P47914 159 aaKnown RBP7.4□□□□□ -1.22
CPSF4-212ENST00000482251 TAS2R60P59551 318 aa7.4□□□□□ -1.22
CPSF4-212ENST00000482251 NHLH2Q02577 135 aa7.4□□□□□ -1.22
CPSF4-212ENST00000482251 OXA1LQ15070 435 aa7.4□□□□□ -1.22
CPSF4-212ENST00000482251 GFI1BQ5VTD9 330 aa7.4□□□□□ -1.22
CPSF4-212ENST00000482251 LINC00299Q6ZSB3 139 aa7.4□□□□□ -1.22
CPSF4-212ENST00000482251 OR5C1Q8NGR4 320 aa7.4□□□□□ -1.22
CPSF4-212ENST00000482251 BLNKQ8WV28 456 aa7.4□□□□□ -1.22
CPSF4-212ENST00000482251 SAT2Q96F10 170 aaPredicted RBP7.4□□□□□ -1.22
CPSF4-212ENST00000482251 C16orf74Q96GX8 76 aa7.4□□□□□ -1.22
CPSF4-212ENST00000482251 NPCDR1Q9BY65 106 aa7.4□□□□□ -1.22
CPSF4-212ENST00000482251 PTTG2Q9NZH5 202 aa7.4□□□□□ -1.22
CPSF4-212ENST00000482251 F5H768 121 aa7.39□□□□□ -1.23
CPSF4-212ENST00000482251 M0R3E3 92 aa7.39□□□□□ -1.23
CPSF4-212ENST00000482251 TSPOP30536 169 aa7.39□□□□□ -1.23
CPSF4-212ENST00000482251 TMEM256Q8N2U0 113 aa7.39□□□□□ -1.23
CPSF4-212ENST00000482251 NOP10Q9NPE3 64 aaKnown RBP7.39□□□□□ -1.23
CPSF4-212ENST00000482251 TRBV19A0A075B6N1 114 aa7.38□□□□□ -1.23
CPSF4-212ENST00000482251 TRAV12-3A0A0B4J271 114 aa7.38□□□□□ -1.23
CPSF4-212ENST00000482251 A6NHS1 94 aa7.38□□□□□ -1.23
CPSF4-212ENST00000482251 INMT-MINDY4F8WBC2 141 aa7.38□□□□□ -1.23
CPSF4-212ENST00000482251 H0YIZ8 118 aa7.38□□□□□ -1.23
CPSF4-212ENST00000482251 NUDT3O95989 172 aa7.38□□□□□ -1.23
CPSF4-212ENST00000482251 CT45A10P0DMU9 189 aa7.38□□□□□ -1.23
CPSF4-212ENST00000482251 ERCC8Q13216 396 aa7.38□□□□□ -1.23
CPSF4-212ENST00000482251 ATP6V1FQ16864 119 aa7.38□□□□□ -1.23
CPSF4-212ENST00000482251 EXOC3-AS1Q8N2X6 119 aa7.38□□□□□ -1.23
CPSF4-212ENST00000482251 RNASE8Q8TDE3 154 aaKnown RBP7.38□□□□□ -1.23
CPSF4-212ENST00000482251 TMEM263Q8WUH6 116 aaKnown RBP7.38□□□□□ -1.23
CPSF4-212ENST00000482251 FAM210BQ96KR6 192 aa7.38□□□□□ -1.23
CPSF4-212ENST00000482251 SLC25A2Q9BXI2 301 aa7.38□□□□□ -1.23
CPSF4-212ENST00000482251 NACAE9PAV3 2078 aa7.37□□□□□ -1.23
CPSF4-212ENST00000482251 E5RGE8 158 aa7.37□□□□□ -1.23
CPSF4-212ENST00000482251 NPIPB6E9PJ23 425 aa7.37□□□□□ -1.23
CPSF4-212ENST00000482251 H7BYZ3 331 aa7.37□□□□□ -1.23
CPSF4-212ENST00000482251 SSNA1O43805 119 aa7.37□□□□□ -1.23
CPSF4-212ENST00000482251 NDUFB4O95168 129 aa7.37□□□□□ -1.23
CPSF4-212ENST00000482251 RLN2P04090 185 aa7.37□□□□□ -1.23
CPSF4-212ENST00000482251 H2BFSP57053 126 aa7.37□□□□□ -1.23
CPSF4-212ENST00000482251 GUK1Q16774 197 aa7.37□□□□□ -1.23
CPSF4-212ENST00000482251 MIR17HGQ75NE6 70 aa7.37□□□□□ -1.23
CPSF4-212ENST00000482251 NMES1Q9C002 83 aa7.37□□□□□ -1.23
CPSF4-212ENST00000482251 SLC25A31Q9H0C2 315 aa7.37□□□□□ -1.23
CPSF4-212ENST00000482251 TIMM9Q9Y5J7 89 aa7.37□□□□□ -1.23
CPSF4-212ENST00000482251 TIMM8BQ9Y5J9 83 aaPredicted RBP7.37□□□□□ -1.23
CPSF4-212ENST00000482251 FAT2Q9NYQ8 4349 aa7.37□□□□□ -1.23
CPSF4-212ENST00000482251 DNAH2Q9P225 4427 aa7.37□□□□□ -1.23
CPSF4-212ENST00000482251 IGKV2-40A0A087WW87 121 aaPredicted RBP7.36□□□□□ -1.23
CPSF4-212ENST00000482251 RTL8CO15255 209 aa7.36□□□□□ -1.23
CPSF4-212ENST00000482251 PRAF2O60831 178 aa7.36□□□□□ -1.23
CPSF4-212ENST00000482251 MPDU1O75352 247 aa7.36□□□□□ -1.23
CPSF4-212ENST00000482251 IGKV2D-40P01614 121 aaPredicted RBP7.36□□□□□ -1.23
CPSF4-212ENST00000482251 ATP5G1P05496 136 aa7.36□□□□□ -1.23
CPSF4-212ENST00000482251 OR10J4P0C629 311 aa7.36□□□□□ -1.23
CPSF4-212ENST00000482251 HIST1H1EP10412 219 aaKnown RBP7.36□□□□□ -1.23
CPSF4-212ENST00000482251 LEPP41159 167 aa7.36□□□□□ -1.23
CPSF4-212ENST00000482251 ATP5G3P48201 142 aa7.36□□□□□ -1.23
CPSF4-212ENST00000482251 BTN1A1Q13410 526 aa7.36□□□□□ -1.23
CPSF4-212ENST00000482251 FAM122CQ6P4D5 195 aa7.36□□□□□ -1.23
CPSF4-212ENST00000482251 C15orf53Q8NAA6 179 aa7.36□□□□□ -1.23
CPSF4-212ENST00000482251 PPP1R1CQ8WVI7 109 aa7.36□□□□□ -1.23
CPSF4-212ENST00000482251 ATG101Q9BSB4 218 aa7.36□□□□□ -1.23
CPSF4-212ENST00000482251 SMIM3Q9BZL3 60 aa7.36□□□□□ -1.23
CPSF4-212ENST00000482251 TMEM14CQ9P0S9 112 aa7.36□□□□□ -1.23
CPSF4-212ENST00000482251 GAGE12BA1L429 117 aa7.35□□□□□ -1.23
CPSF4-212ENST00000482251 PRSS29PA6NIE9 313 aa7.35□□□□□ -1.23
CPSF4-212ENST00000482251 ZNF253O75346 499 aa7.35□□□□□ -1.23
CPSF4-212ENST00000482251 EIF3GO75821 320 aaKnown RBP eCLIP7.35□□□□□ -1.23
CPSF4-212ENST00000482251 GAGE7O76087 117 aa7.35□□□□□ -1.23
CPSF4-212ENST00000482251 GAGE12FP0CL80 117 aa7.35□□□□□ -1.23
CPSF4-212ENST00000482251 GAGE12GP0CL81 117 aa7.35□□□□□ -1.23
CPSF4-212ENST00000482251 GAGE12IP0CL82 117 aa7.35□□□□□ -1.23
CPSF4-212ENST00000482251 ICAM4Q14773 271 aa7.35□□□□□ -1.23
CPSF4-212ENST00000482251 ZNF493Q6ZR52 646 aa7.35□□□□□ -1.23
CPSF4-212ENST00000482251 LINC00336Q6ZUF6 198 aa7.35□□□□□ -1.23
CPSF4-212ENST00000482251 CCDC28AQ8IWP9 274 aa7.35□□□□□ -1.23
CPSF4-212ENST00000482251 CHAC2Q8WUX2 184 aa7.35□□□□□ -1.23
CPSF4-212ENST00000482251 RNF141Q8WVD5 230 aa7.35□□□□□ -1.23
CPSF4-212ENST00000482251 MRPL53Q96EL3 112 aaKnown RBP7.35□□□□□ -1.23
CPSF4-212ENST00000482251 FAM167A-AS1Q96KT0 104 aa7.35□□□□□ -1.23
CPSF4-212ENST00000482251 C20orf144Q9BQM9 153 aa7.35□□□□□ -1.23
CPSF4-212ENST00000482251 KRTAP17-1Q9BYP8 105 aa7.35□□□□□ -1.23
CPSF4-212ENST00000482251 WDR61Q9GZS3 305 aaKnown RBP7.35□□□□□ -1.23
CPSF4-212ENST00000482251 A0A0J9YY99 117 aa7.34□□□□□ -1.23
CPSF4-212ENST00000482251 C7orf71A4D174 169 aa7.34□□□□□ -1.23
CPSF4-212ENST00000482251 CBY3A6NI87 242 aa7.34□□□□□ -1.23
CPSF4-212ENST00000482251 SNURFLB1AK76 121 aa7.34□□□□□ -1.23
CPSF4-212ENST00000482251 OR7C2O60412 319 aa7.34□□□□□ -1.23
CPSF4-212ENST00000482251 DEFA1P59665 94 aa7.34□□□□□ -1.23
CPSF4-212ENST00000482251 DEFA3P59666 94 aa7.34□□□□□ -1.23
CPSF4-212ENST00000482251 CD300CQ08708 224 aa7.34□□□□□ -1.23
CPSF4-212ENST00000482251 OR5I1Q13606 314 aa7.34□□□□□ -1.23
CPSF4-212ENST00000482251 PDE6HQ13956 83 aa7.34□□□□□ -1.23
CPSF4-212ENST00000482251 LGALS9BQ3B8N2 356 aa7.34□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 165.9 ms