RNA–Protein interactions for RNA: ENST00000482192.5

HMGN1-213, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 3

Gene HMGN1, Length 793 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-213ENST00000482192 TRBV19A0A075B6N1 114 aa8.5□□□□□ -1.05
HMGN1-213ENST00000482192 IGHV4-4A0A075B6R2 117 aa8.5□□□□□ -1.05
HMGN1-213ENST00000482192 CDKN1BP46527 198 aa8.5□□□□□ -1.05
HMGN1-213ENST00000482192 FAM222AQ5U5X8 452 aa8.5□□□□□ -1.05
HMGN1-213ENST00000482192 TMEM256Q8N2U0 113 aa8.5□□□□□ -1.05
HMGN1-213ENST00000482192 MBD2Q9UBB5 411 aa8.5□□□□□ -1.05
HMGN1-213ENST00000482192 APLNQ9ULZ1 77 aa8.5□□□□□ -1.05
HMGN1-213ENST00000482192 HSPB11Q9Y547 144 aa8.5□□□□□ -1.05
HMGN1-213ENST00000482192 ALG5Q9Y673 324 aa8.5□□□□□ -1.05
HMGN1-213ENST00000482192 PRAC2D3DTV9 90 aa8.49□□□□□ -1.05
HMGN1-213ENST00000482192 PRB4P10163 310 aaPredicted RBP8.49□□□□□ -1.05
HMGN1-213ENST00000482192 HIST1H1EP10412 219 aaKnown RBP8.49□□□□□ -1.05
HMGN1-213ENST00000482192 RPL12P30050 165 aaKnown RBP8.49□□□□□ -1.05
HMGN1-213ENST00000482192 TSPOP30536 169 aa8.49□□□□□ -1.05
HMGN1-213ENST00000482192 PDE6HQ13956 83 aa8.49□□□□□ -1.05
HMGN1-213ENST00000482192 OXA1LQ15070 435 aa8.49□□□□□ -1.05
HMGN1-213ENST00000482192 RPP25LQ8N5L8 163 aaKnown RBP8.49□□□□□ -1.05
HMGN1-213ENST00000482192 MRPL53Q96EL3 112 aaKnown RBP8.49□□□□□ -1.05
HMGN1-213ENST00000482192 NIPSNAP3BQ9BS92 247 aa8.49□□□□□ -1.05
HMGN1-213ENST00000482192 SLC25A2Q9BXI2 301 aa8.49□□□□□ -1.05
HMGN1-213ENST00000482192 MRPL32Q9BYC8 188 aaKnown RBP8.49□□□□□ -1.05
HMGN1-213ENST00000482192 TIMM9Q9Y5J7 89 aa8.49□□□□□ -1.05
HMGN1-213ENST00000482192 ZNF705GA8MUZ8 300 aaPredicted RBP8.48□□□□□ -1.05
HMGN1-213ENST00000482192 IFNA5P01569 189 aa8.48□□□□□ -1.05
HMGN1-213ENST00000482192 PYYP10082 97 aa8.48□□□□□ -1.05
HMGN1-213ENST00000482192 TAS2R60P59551 318 aa8.48□□□□□ -1.05
HMGN1-213ENST00000482192 MIR17HGQ75NE6 70 aa8.48□□□□□ -1.05
HMGN1-213ENST00000482192 SCGB1C1Q8TD33 95 aa8.48□□□□□ -1.05
HMGN1-213ENST00000482192 LINC01587Q99440 93 aa8.48□□□□□ -1.05
HMGN1-213ENST00000482192 C20orf144Q9BQM9 153 aa8.48□□□□□ -1.05
HMGN1-213ENST00000482192 FUT9Q9Y231 359 aa8.48□□□□□ -1.05
HMGN1-213ENST00000482192 NPIPB6E9PJ23 425 aa8.47□□□□□ -1.05
HMGN1-213ENST00000482192 NDUFB4O95168 129 aa8.47□□□□□ -1.05
HMGN1-213ENST00000482192 BLNKQ8WV28 456 aa8.47□□□□□ -1.05
HMGN1-213ENST00000482192 FAM167A-AS1Q96KT0 104 aa8.47□□□□□ -1.05
HMGN1-213ENST00000482192 ODF3Q96PU9 254 aa8.47□□□□□ -1.05
HMGN1-213ENST00000482192 NDUFAF3Q9BU61 184 aa8.47□□□□□ -1.05
HMGN1-213ENST00000482192 SMIM3Q9BZL3 60 aa8.47□□□□□ -1.05
HMGN1-213ENST00000482192 MED28Q9H204 178 aa8.47□□□□□ -1.05
HMGN1-213ENST00000482192 OR51M1Q9H341 326 aa8.47□□□□□ -1.05
HMGN1-213ENST00000482192 AAMDCQ9H7C9 122 aa8.47□□□□□ -1.05
HMGN1-213ENST00000482192 PRELID1Q9Y255 219 aa8.47□□□□□ -1.05
HMGN1-213ENST00000482192 LYRM9A8MSI8 78 aa8.46□□□□□ -1.06
HMGN1-213ENST00000482192 H7BYZ3 331 aa8.46□□□□□ -1.06
HMGN1-213ENST00000482192 M0R3E3 92 aa8.46□□□□□ -1.06
HMGN1-213ENST00000482192 PRM2P04554 102 aa8.46□□□□□ -1.06
HMGN1-213ENST00000482192 LEPP41159 167 aa8.46□□□□□ -1.06
HMGN1-213ENST00000482192 DAD1P61803 113 aa8.46□□□□□ -1.06
HMGN1-213ENST00000482192 GFI1BQ5VTD9 330 aa8.46□□□□□ -1.06
HMGN1-213ENST00000482192 EXOC3-AS1Q8N2X6 119 aa8.46□□□□□ -1.06
HMGN1-213ENST00000482192 C16orf74Q96GX8 76 aa8.46□□□□□ -1.06
HMGN1-213ENST00000482192 FAM210BQ96KR6 192 aa8.46□□□□□ -1.06
HMGN1-213ENST00000482192 PARD6GQ9BYG4 376 aaPredicted RBP8.46□□□□□ -1.06
HMGN1-213ENST00000482192 SACSQ9NZJ4 4579 aa8.45□□□□□ -1.06
HMGN1-213ENST00000482192 OR7C2O60412 319 aa8.45□□□□□ -1.06
HMGN1-213ENST00000482192 NBEAP1P0C6P0 100 aa8.45□□□□□ -1.06
HMGN1-213ENST00000482192 CT45A10P0DMU9 189 aa8.45□□□□□ -1.06
HMGN1-213ENST00000482192 HTN1P15515 57 aa8.45□□□□□ -1.06
HMGN1-213ENST00000482192 AZU1P20160 251 aa8.45□□□□□ -1.06
HMGN1-213ENST00000482192 ICAM4Q14773 271 aa8.45□□□□□ -1.06
HMGN1-213ENST00000482192 FCN2Q15485 313 aa8.45□□□□□ -1.06
HMGN1-213ENST00000482192 FFAR4Q5NUL3 377 aa8.45□□□□□ -1.06
HMGN1-213ENST00000482192 ZNF493Q6ZR52 646 aa8.45□□□□□ -1.06
HMGN1-213ENST00000482192 FXYD5Q96DB9 178 aa8.45□□□□□ -1.06
HMGN1-213ENST00000482192 PAXXQ9BUH6 204 aa8.45□□□□□ -1.06
HMGN1-213ENST00000482192 LYSTQ99698 3801 aa8.45□□□□□ -1.06
HMGN1-213ENST00000482192 PLAC8L1A1L4L8 177 aa8.44□□□□□ -1.06
HMGN1-213ENST00000482192 OR10J4P0C629 311 aa8.44□□□□□ -1.06
HMGN1-213ENST00000482192 HTN3P15516 51 aa8.44□□□□□ -1.06
HMGN1-213ENST00000482192 TAS2R45P59539 299 aa8.44□□□□□ -1.06
HMGN1-213ENST00000482192 KIR3DS1Q14943 382 aa8.44□□□□□ -1.06
HMGN1-213ENST00000482192 KHDC3LQ587J8 217 aa8.44□□□□□ -1.06
HMGN1-213ENST00000482192 RNASE8Q8TDE3 154 aaKnown RBP8.44□□□□□ -1.06
HMGN1-213ENST00000482192 TMEM263Q8WUH6 116 aaKnown RBP8.44□□□□□ -1.06
HMGN1-213ENST00000482192 RNF141Q8WVD5 230 aa8.44□□□□□ -1.06
HMGN1-213ENST00000482192 ASB13Q8WXK3 278 aa8.44□□□□□ -1.06
HMGN1-213ENST00000482192 WFDC1Q9HC57 220 aa8.44□□□□□ -1.06
HMGN1-213ENST00000482192 J3KRW8 73 aa8.43□□□□□ -1.06
HMGN1-213ENST00000482192 SLC25A5P05141 298 aaKnown RBP8.43□□□□□ -1.06
HMGN1-213ENST00000482192 P0DMU3 169 aa8.43□□□□□ -1.06
HMGN1-213ENST00000482192 FAM231AP0DMU4 169 aa8.43□□□□□ -1.06
HMGN1-213ENST00000482192 FAM231CP0DMU5 169 aa8.43□□□□□ -1.06
HMGN1-213ENST00000482192 DEFB130BP0DP73 79 aa8.43□□□□□ -1.06
HMGN1-213ENST00000482192 DEFB130AP0DP74 79 aa8.43□□□□□ -1.06
HMGN1-213ENST00000482192 UBE2L3P68036 154 aaKnown RBP8.43□□□□□ -1.06
HMGN1-213ENST00000482192 ZNF266Q14584 549 aa8.43□□□□□ -1.06
HMGN1-213ENST00000482192 RGS21Q2M5E4 152 aa8.43□□□□□ -1.06
HMGN1-213ENST00000482192 FAM122CQ6P4D5 195 aa8.43□□□□□ -1.06
HMGN1-213ENST00000482192 CCDC28AQ8IWP9 274 aa8.43□□□□□ -1.06
HMGN1-213ENST00000482192 LINC00477Q96M19 166 aa8.43□□□□□ -1.06
HMGN1-213ENST00000482192 TIMM8BQ9Y5J9 83 aaPredicted RBP8.43□□□□□ -1.06
HMGN1-213ENST00000482192 DNAH1Q9P2D7 4330 aa8.42□□□□□ -1.06
HMGN1-213ENST00000482192 TRAV12-3A0A0B4J271 114 aa8.42□□□□□ -1.06
HMGN1-213ENST00000482192 GIPP09681 153 aaPredicted RBP8.42□□□□□ -1.06
HMGN1-213ENST00000482192 ERCC8Q13216 396 aa8.42□□□□□ -1.06
HMGN1-213ENST00000482192 ACOT6Q3I5F7 207 aaPredicted RBP8.42□□□□□ -1.06
HMGN1-213ENST00000482192 TMEM78Q5T7P6 136 aa8.42□□□□□ -1.06
HMGN1-213ENST00000482192 C9orf47Q6ZRZ4 202 aa8.42□□□□□ -1.06
HMGN1-213ENST00000482192 LYPD1Q8N2G4 141 aa8.42□□□□□ -1.06
HMGN1-213ENST00000482192 ZNF503Q96F45 646 aa8.42□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms