RNA–Protein interactions for RNA: ENST00000482056.2

C9orf3-218, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 1 (best)

Gene C9orf3, Length 1,951 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-218ENST00000482056 PRR25Q96S07 402 aa11.99□□□□□ -0.49
C9orf3-218ENST00000482056 COX11Q9Y6N1 276 aa11.99□□□□□ -0.49
C9orf3-218ENST00000482056 ABCA4P78363 2273 aa11.99□□□□□ -0.49
C9orf3-218ENST00000482056 CTSGP08311 255 aa11.99□□□□□ -0.49
C9orf3-218ENST00000482056 CDSNQ15517 529 aa11.99□□□□□ -0.49
C9orf3-218ENST00000482056 FAM104BQ5XKR9 115 aa11.99□□□□□ -0.49
C9orf3-218ENST00000482056 ORMDL3Q8N138 153 aa11.99□□□□□ -0.49
C9orf3-218ENST00000482056 PRELID3AQ96N28 172 aa11.99□□□□□ -0.49
C9orf3-218ENST00000482056 ZNF747Q9BV97 191 aa11.99□□□□□ -0.49
C9orf3-218ENST00000482056 U3KQK5 164 aa11.99□□□□□ -0.49
C9orf3-218ENST00000482056 IGHV7-81A0A0B4J1V7 117 aa11.98□□□□□ -0.49
C9orf3-218ENST00000482056 D6R8Y8 96 aa11.98□□□□□ -0.49
C9orf3-218ENST00000482056 SCRT2Q9NQ03 307 aa11.98□□□□□ -0.49
C9orf3-218ENST00000482056 DMXL2Q8TDJ6 3036 aa11.98□□□□□ -0.49
C9orf3-218ENST00000482056 PRB4P10163 310 aaPredicted RBP11.98□□□□□ -0.49
C9orf3-218ENST00000482056 SRSF2Q01130 221 aaKnown RBP11.98□□□□□ -0.49
C9orf3-218ENST00000482056 UNQ5815/PRO19632Q6UWF5 114 aa11.98□□□□□ -0.49
C9orf3-218ENST00000482056 FER1L6-AS1Q8NA97 138 aa11.98□□□□□ -0.49
C9orf3-218ENST00000482056 FAM110DQ8TAY7 271 aaPredicted RBP11.98□□□□□ -0.49
C9orf3-218ENST00000482056 PMCHL2Q9BQD1 86 aa11.98□□□□□ -0.49
C9orf3-218ENST00000482056 TMEM213A2RRL7 107 aa11.97□□□□□ -0.49
C9orf3-218ENST00000482056 ZZEF1O43149 2961 aa11.97□□□□□ -0.49
C9orf3-218ENST00000482056 TCF21O43680 179 aa11.97□□□□□ -0.49
C9orf3-218ENST00000482056 EGR2P11161 476 aaPredicted RBP11.97□□□□□ -0.49
C9orf3-218ENST00000482056 C12orf54Q6X4T0 127 aa11.97□□□□□ -0.49
C9orf3-218ENST00000482056 Q8N9W7 124 aa11.97□□□□□ -0.49
C9orf3-218ENST00000482056 SIRPDQ9H106 197 aa11.97□□□□□ -0.49
C9orf3-218ENST00000482056 PPP1R14DQ9NXH3 145 aa11.97□□□□□ -0.49
C9orf3-218ENST00000482056 CEP295Q9C0D2 2601 aa11.97□□□□□ -0.49
C9orf3-218ENST00000482056 IFI27P40305 119 aaPredicted RBP11.96□□□□□ -0.49
C9orf3-218ENST00000482056 PTTG1IPP53801 180 aa11.96□□□□□ -0.49
C9orf3-218ENST00000482056 ZFP36P26651 326 aaKnown RBP11.96□□□□□ -0.5
C9orf3-218ENST00000482056 AMN1Q8IY45 258 aa11.96□□□□□ -0.5
C9orf3-218ENST00000482056 SIGLEC8Q9NYZ4 499 aa11.96□□□□□ -0.5
C9orf3-218ENST00000482056 SMAD5-AS1Q9Y6J3 95 aa11.96□□□□□ -0.5
C9orf3-218ENST00000482056 SPTA1P02549 2419 aa11.95□□□□□ -0.5
C9orf3-218ENST00000482056 LOC389332A0A1B0GUA5 103 aa11.95□□□□□ -0.5
C9orf3-218ENST00000482056 GOSR1O95249 250 aa11.95□□□□□ -0.5
C9orf3-218ENST00000482056 UBE2E1P51965 193 aa11.95□□□□□ -0.5
C9orf3-218ENST00000482056 TWIST1Q15672 202 aa11.95□□□□□ -0.5
C9orf3-218ENST00000482056 ZNF502Q8TBZ5 544 aa11.95□□□□□ -0.5
C9orf3-218ENST00000482056 RAXQ9Y2V3 346 aa11.95□□□□□ -0.5
C9orf3-218ENST00000482056 A0A087X0K7 114 aa11.94□□□□□ -0.5
C9orf3-218ENST00000482056 IGHV2-70DA0A0C4DH43 119 aa11.94□□□□□ -0.5
C9orf3-218ENST00000482056 GPR183P32249 361 aa11.94□□□□□ -0.5
C9orf3-218ENST00000482056 CKS2P33552 79 aa11.94□□□□□ -0.5
C9orf3-218ENST00000482056 HIST1H1AQ02539 215 aaPredicted RBP11.94□□□□□ -0.5
C9orf3-218ENST00000482056 C15orf32Q32M92 178 aa11.94□□□□□ -0.5
C9orf3-218ENST00000482056 MRPL51Q4U2R6 128 aaKnown RBP11.94□□□□□ -0.5
C9orf3-218ENST00000482056 MPV17L2Q567V2 206 aa11.94□□□□□ -0.5
C9orf3-218ENST00000482056 Q8TAT8 98 aa11.94□□□□□ -0.5
C9orf3-218ENST00000482056 VGLL1Q99990 258 aa11.94□□□□□ -0.5
C9orf3-218ENST00000482056 FABP5P3A8MUU1 101 aa11.94□□□□□ -0.5
C9orf3-218ENST00000482056 NUDT3O95989 172 aa11.94□□□□□ -0.5
C9orf3-218ENST00000482056 UBE2V1Q13404 147 aa11.94□□□□□ -0.5
C9orf3-218ENST00000482056 ECSCRQ19T08 205 aa11.94□□□□□ -0.5
C9orf3-218ENST00000482056 DPF1Q92782 380 aa11.94□□□□□ -0.5
C9orf3-218ENST00000482056 SLC50A1Q9BRV3 221 aa11.94□□□□□ -0.5
C9orf3-218ENST00000482056 RBAKDNA6NC62 111 aa11.93□□□□□ -0.5
C9orf3-218ENST00000482056 HBDP02042 147 aa11.93□□□□□ -0.5
C9orf3-218ENST00000482056 ORM1P02763 201 aa11.93□□□□□ -0.5
C9orf3-218ENST00000482056 IGLC6P0CF74 106 aa11.93□□□□□ -0.5
C9orf3-218ENST00000482056 RHOGP84095 191 aa11.93□□□□□ -0.5
C9orf3-218ENST00000482056 KLK9Q2XQG4 91 aa11.93□□□□□ -0.5
C9orf3-218ENST00000482056 OR8A1Q8NGG7 326 aa11.93□□□□□ -0.5
C9orf3-218ENST00000482056 MCRIP2Q9BUT9 160 aaKnown RBP11.93□□□□□ -0.5
C9orf3-218ENST00000482056 KLK9Q9UKQ9 250 aa11.93□□□□□ -0.5
C9orf3-218ENST00000482056 COX8AP10176 69 aa11.92□□□□□ -0.5
C9orf3-218ENST00000482056 BVES-AS1Q5T3Y7 98 aa11.92□□□□□ -0.5
C9orf3-218ENST00000482056 PPBPP02775 128 aa11.92□□□□□ -0.5
C9orf3-218ENST00000482056 LGALS9BQ3B8N2 356 aa11.92□□□□□ -0.5
C9orf3-218ENST00000482056 LGALS9CQ6DKI2 356 aa11.92□□□□□ -0.5
C9orf3-218ENST00000482056 ATP6V0E1O15342 81 aa11.91□□□□□ -0.5
C9orf3-218ENST00000482056 IGHG4P01861 327 aa11.91□□□□□ -0.5
C9orf3-218ENST00000482056 CLEC3BP05452 202 aa11.91□□□□□ -0.5
C9orf3-218ENST00000482056 ZNF80P51504 273 aaPredicted RBP11.91□□□□□ -0.5
C9orf3-218ENST00000482056 EFNA4P52798 201 aa11.91□□□□□ -0.5
C9orf3-218ENST00000482056 IGFL4Q6B9Z1 124 aa11.91□□□□□ -0.5
C9orf3-218ENST00000482056 OR1N2Q8NGR9 330 aa11.91□□□□□ -0.5
C9orf3-218ENST00000482056 EEF1AKMT3Q96AZ1 226 aa11.91□□□□□ -0.5
C9orf3-218ENST00000482056 ZFAND3Q9H8U3 227 aa11.91□□□□□ -0.5
C9orf3-218ENST00000482056 IGHV3-35A0A0C4DH35 117 aa11.9□□□□□ -0.5
C9orf3-218ENST00000482056 MUC21A0A0G2JKD1 596 aa11.9□□□□□ -0.5
C9orf3-218ENST00000482056 MUC21A0A140T8X8 626 aa11.9□□□□□ -0.5
C9orf3-218ENST00000482056 CCL25O15444 150 aa11.9□□□□□ -0.5
C9orf3-218ENST00000482056 BUB3O43684 328 aa11.9□□□□□ -0.5
C9orf3-218ENST00000482056 HLA-DMBP28068 263 aa11.9□□□□□ -0.5
C9orf3-218ENST00000482056 NHLH1Q02575 133 aa11.9□□□□□ -0.5
C9orf3-218ENST00000482056 FAM106AQ4KMX7 169 aa11.9□□□□□ -0.5
C9orf3-218ENST00000482056 MUC21Q5SSG8 566 aa11.9□□□□□ -0.5
C9orf3-218ENST00000482056 UBTD1Q9HAC8 227 aa11.9□□□□□ -0.5
C9orf3-218ENST00000482056 A0A096LNJ9 63 aa11.9□□□□□ -0.5
C9orf3-218ENST00000482056 NCR2O95944 276 aa11.9□□□□□ -0.5
C9orf3-218ENST00000482056 SAA4P35542 130 aa11.9□□□□□ -0.5
C9orf3-218ENST00000482056 CNFNQ9BYD5 112 aa11.9□□□□□ -0.5
C9orf3-218ENST00000482056 MAP1LC3AQ9H492 121 aa11.9□□□□□ -0.5
C9orf3-218ENST00000482056 TP73-AS1Q9UF72 201 aa11.9□□□□□ -0.5
C9orf3-218ENST00000482056 CBY1Q9Y3M2 126 aa11.9□□□□□ -0.5
C9orf3-218ENST00000482056 TACC2O95359 2948 aa11.9□□□□□ -0.5
C9orf3-218ENST00000482056 IGHV3OR16-8A0A075B7F1 116 aa11.89□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms