RNA–Protein interactions for RNA: ENST00000481335.5

SQSTM1-207, Transcript of sequestosome 1, humanhuman

TSL 4

Gene SQSTM1, Length 562 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQSTM1-207ENST00000481335 S100ZQ8WXG8 99 aa8.55□□□□□ -1.04
SQSTM1-207ENST00000481335 SAT2Q96F10 170 aaPredicted RBP8.55□□□□□ -1.04
SQSTM1-207ENST00000481335 PLA2G2EQ9NZK7 142 aa8.55□□□□□ -1.04
SQSTM1-207ENST00000481335 FAM240BA0A1B0GVZ2 78 aa8.54□□□□□ -1.04
SQSTM1-207ENST00000481335 SLC17A3O00476 420 aa8.54□□□□□ -1.04
SQSTM1-207ENST00000481335 CST7O76096 145 aa8.54□□□□□ -1.04
SQSTM1-207ENST00000481335 H2AFB2P0C5Z0 115 aa8.54□□□□□ -1.04
SQSTM1-207ENST00000481335 DEFB130BP0DP73 79 aa8.54□□□□□ -1.04
SQSTM1-207ENST00000481335 DEFB130AP0DP74 79 aa8.54□□□□□ -1.04
SQSTM1-207ENST00000481335 AZU1P20160 251 aa8.54□□□□□ -1.04
SQSTM1-207ENST00000481335 IL15RAQ13261 267 aa8.54□□□□□ -1.04
SQSTM1-207ENST00000481335 CCDC28AQ8IWP9 274 aa8.54□□□□□ -1.04
SQSTM1-207ENST00000481335 TMEM252Q8N6L7 170 aa8.54□□□□□ -1.04
SQSTM1-207ENST00000481335 SEC22CQ9BRL7 303 aa8.54□□□□□ -1.04
SQSTM1-207ENST00000481335 ATG101Q9BSB4 218 aa8.54□□□□□ -1.04
SQSTM1-207ENST00000481335 SLC39A9Q9NUM3 307 aa8.54□□□□□ -1.04
SQSTM1-207ENST00000481335 UBE2L5PA0A1B0GUS4 154 aa8.53□□□□□ -1.04
SQSTM1-207ENST00000481335 FAM24AA6NFZ4 105 aa8.53□□□□□ -1.04
SQSTM1-207ENST00000481335 NPIPB6E9PJ23 425 aa8.53□□□□□ -1.04
SQSTM1-207ENST00000481335 F5H768 121 aa8.53□□□□□ -1.04
SQSTM1-207ENST00000481335 M0R2N4 97 aa8.53□□□□□ -1.04
SQSTM1-207ENST00000481335 MED14OSP0DP75 135 aa8.53□□□□□ -1.04
SQSTM1-207ENST00000481335 LEPP41159 167 aa8.53□□□□□ -1.04
SQSTM1-207ENST00000481335 S100A10P60903 97 aa8.53□□□□□ -1.04
SQSTM1-207ENST00000481335 BAXQ07812 192 aa8.53□□□□□ -1.04
SQSTM1-207ENST00000481335 RAB32Q13637 225 aa8.53□□□□□ -1.04
SQSTM1-207ENST00000481335 MORN5Q5VZ52 161 aa8.53□□□□□ -1.04
SQSTM1-207ENST00000481335 MIC13Q5XKP0 118 aa8.53□□□□□ -1.04
SQSTM1-207ENST00000481335 ZNF503Q96F45 646 aa8.53□□□□□ -1.04
SQSTM1-207ENST00000481335 PYGO2Q9BRQ0 406 aa8.53□□□□□ -1.04
SQSTM1-207ENST00000481335 TMEM14CQ9P0S9 112 aa8.53□□□□□ -1.04
SQSTM1-207ENST00000481335 PRELID1Q9Y255 219 aa8.53□□□□□ -1.04
SQSTM1-207ENST00000481335 IGLV2-18A0A075B6J9 118 aa8.52□□□□□ -1.05
SQSTM1-207ENST00000481335 H3BQ15 152 aa8.52□□□□□ -1.05
SQSTM1-207ENST00000481335 PRM2P04554 102 aa8.52□□□□□ -1.05
SQSTM1-207ENST00000481335 CCL18P55774 89 aa8.52□□□□□ -1.05
SQSTM1-207ENST00000481335 ASAH1Q13510 395 aa8.52□□□□□ -1.05
SQSTM1-207ENST00000481335 C1orf134Q5TEV5 83 aa8.52□□□□□ -1.05
SQSTM1-207ENST00000481335 GFI1BQ5VTD9 330 aa8.52□□□□□ -1.05
SQSTM1-207ENST00000481335 LINC00612Q8N6U2 182 aa8.52□□□□□ -1.05
SQSTM1-207ENST00000481335 GPN1Q9HCN4 374 aaPredicted RBP8.52□□□□□ -1.05
SQSTM1-207ENST00000481335 KCNIP2Q9NS61 270 aa8.52□□□□□ -1.05
SQSTM1-207ENST00000481335 PKD1P98161 4303 aa8.51□□□□□ -1.05
SQSTM1-207ENST00000481335 TRBV19A0A075B6N1 114 aa8.51□□□□□ -1.05
SQSTM1-207ENST00000481335 IGSF23A1L1A6 192 aa8.51□□□□□ -1.05
SQSTM1-207ENST00000481335 SLC25A5P05141 298 aaKnown RBP8.51□□□□□ -1.05
SQSTM1-207ENST00000481335 HIST1H1EP10412 219 aaKnown RBP8.51□□□□□ -1.05
SQSTM1-207ENST00000481335 HTN1P15515 57 aa8.51□□□□□ -1.05
SQSTM1-207ENST00000481335 NOP10Q9NPE3 64 aaKnown RBP8.51□□□□□ -1.05
SQSTM1-207ENST00000481335 ZNF586Q9NXT0 402 aa8.51□□□□□ -1.05
SQSTM1-207ENST00000481335 MUC4Q99102 2169 aa8.51□□□□□ -1.05
SQSTM1-207ENST00000481335 KIAA1109Q2LD37 5005 aa8.51□□□□□ -1.05
SQSTM1-207ENST00000481335 DNAH11Q96DT5 4516 aa8.5□□□□□ -1.05
SQSTM1-207ENST00000481335 SNURFLB1AK76 121 aa8.5□□□□□ -1.05
SQSTM1-207ENST00000481335 PRAC2D3DTV9 90 aa8.5□□□□□ -1.05
SQSTM1-207ENST00000481335 H3BNG1 76 aa8.5□□□□□ -1.05
SQSTM1-207ENST00000481335 PRAF2O60831 178 aa8.5□□□□□ -1.05
SQSTM1-207ENST00000481335 RLN2P04090 185 aa8.5□□□□□ -1.05
SQSTM1-207ENST00000481335 FGF7P21781 194 aa8.5□□□□□ -1.05
SQSTM1-207ENST00000481335 DAZ2Q13117 558 aaKnown RBP8.5□□□□□ -1.05
SQSTM1-207ENST00000481335 ZNF680Q8NEM1 530 aa8.5□□□□□ -1.05
SQSTM1-207ENST00000481335 ZNRF2Q8NHG8 242 aa8.5□□□□□ -1.05
SQSTM1-207ENST00000481335 LINC00477Q96M19 166 aa8.5□□□□□ -1.05
SQSTM1-207ENST00000481335 C18orf15Q96N68 181 aa8.5□□□□□ -1.05
SQSTM1-207ENST00000481335 LINC00467Q9BRT7 94 aa8.5□□□□□ -1.05
SQSTM1-207ENST00000481335 NPCDR1Q9BY65 106 aa8.5□□□□□ -1.05
SQSTM1-207ENST00000481335 NMES1Q9C002 83 aa8.5□□□□□ -1.05
SQSTM1-207ENST00000481335 SLC25A31Q9H0C2 315 aa8.5□□□□□ -1.05
SQSTM1-207ENST00000481335 AAMDCQ9H7C9 122 aa8.5□□□□□ -1.05
SQSTM1-207ENST00000481335 NBDYA0A0U1RRE5 68 aa8.49□□□□□ -1.05
SQSTM1-207ENST00000481335 E5RGE8 158 aa8.49□□□□□ -1.05
SQSTM1-207ENST00000481335 NUDT3O95989 172 aa8.49□□□□□ -1.05
SQSTM1-207ENST00000481335 NMBP08949 121 aa8.49□□□□□ -1.05
SQSTM1-207ENST00000481335 CT45A10P0DMU9 189 aa8.49□□□□□ -1.05
SQSTM1-207ENST00000481335 M6PRP20645 277 aa8.49□□□□□ -1.05
SQSTM1-207ENST00000481335 CYCSP99999 105 aaKnown RBP8.49□□□□□ -1.05
SQSTM1-207ENST00000481335 FCN2Q15485 313 aa8.49□□□□□ -1.05
SQSTM1-207ENST00000481335 ENKURQ8TC29 256 aa8.49□□□□□ -1.05
SQSTM1-207ENST00000481335 RNF141Q8WVD5 230 aa8.49□□□□□ -1.05
SQSTM1-207ENST00000481335 MRPL32Q9BYC8 188 aaKnown RBP8.49□□□□□ -1.05
SQSTM1-207ENST00000481335 TRAV5A0A0B4J249 113 aa8.48□□□□□ -1.05
SQSTM1-207ENST00000481335 C7orf71A4D174 169 aa8.48□□□□□ -1.05
SQSTM1-207ENST00000481335 KLLNB2CW77 178 aa8.48□□□□□ -1.05
SQSTM1-207ENST00000481335 H3BTX0 84 aa8.48□□□□□ -1.05
SQSTM1-207ENST00000481335 SNRPCP09234 159 aaKnown RBP8.48□□□□□ -1.05
SQSTM1-207ENST00000481335 CRISP2P16562 243 aa8.48□□□□□ -1.05
SQSTM1-207ENST00000481335 CLINT1Q14677 625 aa8.48□□□□□ -1.05
SQSTM1-207ENST00000481335 KIR3DS1Q14943 382 aa8.48□□□□□ -1.05
SQSTM1-207ENST00000481335 RXFP4Q8TDU9 374 aa8.48□□□□□ -1.05
SQSTM1-207ENST00000481335 FAM19A4Q96LR4 140 aa8.48□□□□□ -1.05
SQSTM1-207ENST00000481335 TIMM9Q9Y5J7 89 aa8.48□□□□□ -1.05
SQSTM1-207ENST00000481335 RYR1P21817 5038 aa8.48□□□□□ -1.05
SQSTM1-207ENST00000481335 TRAV12-3A0A0B4J271 114 aa8.47□□□□□ -1.05
SQSTM1-207ENST00000481335 TRBV7-9A0A0J9YWB2 115 aa8.47□□□□□ -1.05
SQSTM1-207ENST00000481335 UPK1BO75841 260 aa8.47□□□□□ -1.05
SQSTM1-207ENST00000481335 NDUFB4O95168 129 aa8.47□□□□□ -1.05
SQSTM1-207ENST00000481335 BTF3P20290 206 aaKnown RBP8.47□□□□□ -1.05
SQSTM1-207ENST00000481335 ANXA2RQ3ZCQ2 193 aa8.47□□□□□ -1.05
SQSTM1-207ENST00000481335 TTC32Q5I0X7 151 aa8.47□□□□□ -1.05
SQSTM1-207ENST00000481335 C9orf47Q6ZRZ4 202 aa8.47□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 45.9 ms