RNA–Protein interactions for RNA: ENST00000481040.1

COPA-203, Transcript of coatomer protein complex subunit alpha, humanhuman

TSL 3

Gene COPA, Length 578 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPA-203ENST00000481040 TMEM254Q8TBM7 123 aa2.48□□□□□ -2.01
COPA-203ENST00000481040 SFT2D1Q8WV19 159 aa2.48□□□□□ -2.01
COPA-203ENST00000481040 AP1S3Q96PC3 154 aa2.48□□□□□ -2.01
COPA-203ENST00000481040 PFDN5Q99471 154 aa2.48□□□□□ -2.01
COPA-203ENST00000481040 TSC22D3Q99576 134 aa2.48□□□□□ -2.01
COPA-203ENST00000481040 KIAA1107Q9UPP5 1409 aa2.48□□□□□ -2.01
COPA-203ENST00000481040 DLC1Q96QB1 1528 aa2.47□□□□□ -2.01
COPA-203ENST00000481040 RIMS1Q86UR5 1692 aaKnown RBP2.47□□□□□ -2.01
COPA-203ENST00000481040 BRWD1Q9NSI6 2320 aa2.47□□□□□ -2.01
COPA-203ENST00000481040 COL11A1P12107 1806 aaPredicted RBP2.47□□□□□ -2.01
COPA-203ENST00000481040 ZFC3H1O60293 1989 aaKnown RBP2.47□□□□□ -2.01
COPA-203ENST00000481040 TRAV14DV4A0A0A6YYC5 116 aa2.47□□□□□ -2.01
COPA-203ENST00000481040 hDV103S1A0JD37 113 aa2.47□□□□□ -2.01
COPA-203ENST00000481040 FABP4P15090 132 aa2.47□□□□□ -2.01
COPA-203ENST00000481040 PDE6HQ13956 83 aa2.47□□□□□ -2.01
COPA-203ENST00000481040 TMEM244Q5VVB8 128 aa2.47□□□□□ -2.01
COPA-203ENST00000481040 CALML5Q9NZT1 146 aa2.47□□□□□ -2.01
COPA-203ENST00000481040 SOGA1O94964 1423 aa2.47□□□□□ -2.01
COPA-203ENST00000481040 FAM135BQ49AJ0 1406 aa2.47□□□□□ -2.01
COPA-203ENST00000481040 POLEQ07864 2286 aa2.46□□□□□ -2.02
COPA-203ENST00000481040 C5orf58C9J3I9 102 aa2.46□□□□□ -2.02
COPA-203ENST00000481040 BRS3P32247 399 aa2.46□□□□□ -2.02
COPA-203ENST00000481040 DSCR4P56555 118 aaPredicted RBP2.46□□□□□ -2.02
COPA-203ENST00000481040 KRTAP10-1P60331 282 aa2.46□□□□□ -2.02
COPA-203ENST00000481040 MAXP61244 160 aa2.46□□□□□ -2.02
COPA-203ENST00000481040 CDK6Q00534 326 aa2.46□□□□□ -2.02
COPA-203ENST00000481040 TMEM14EPQ6UXP3 125 aa2.46□□□□□ -2.02
COPA-203ENST00000481040 FP248Q71RG6 208 aaPredicted RBP2.46□□□□□ -2.02
COPA-203ENST00000481040 CCL4L1Q8NHW4 92 aa2.46□□□□□ -2.02
COPA-203ENST00000481040 RAB37Q96AX2 223 aa2.46□□□□□ -2.02
COPA-203ENST00000481040 TPT1P8Q9HAU6 139 aa2.46□□□□□ -2.02
COPA-203ENST00000481040 OR5AC2Q9NZP5 309 aa2.46□□□□□ -2.02
COPA-203ENST00000481040 COL4A5P29400 1685 aa2.46□□□□□ -2.02
COPA-203ENST00000481040 LRRC7Q96NW7 1537 aa2.46□□□□□ -2.02
COPA-203ENST00000481040 MYLKQ15746 1914 aa2.46□□□□□ -2.02
COPA-203ENST00000481040 MED12LQ86YW9 2145 aa2.45□□□□□ -2.02
COPA-203ENST00000481040 TANC2Q9HCD6 1990 aa2.45□□□□□ -2.02
COPA-203ENST00000481040 E7EUB6 86 aa2.45□□□□□ -2.02
COPA-203ENST00000481040 TPT1P13693 172 aaKnown RBP2.45□□□□□ -2.02
COPA-203ENST00000481040 ZNF93P35789 620 aaPredicted RBP2.45□□□□□ -2.02
COPA-203ENST00000481040 COA5Q86WW8 74 aa2.45□□□□□ -2.02
COPA-203ENST00000481040 CLECL1Q8IZS7 167 aa2.45□□□□□ -2.02
COPA-203ENST00000481040 LRRC18Q8N456 261 aa2.45□□□□□ -2.02
COPA-203ENST00000481040 MUCL1Q96DR8 90 aa2.45□□□□□ -2.02
COPA-203ENST00000481040 SMIM3Q9BZL3 60 aa2.45□□□□□ -2.02
COPA-203ENST00000481040 TMEM106BQ9NUM4 274 aa2.45□□□□□ -2.02
COPA-203ENST00000481040 TPRKBQ9Y3C4 175 aa2.45□□□□□ -2.02
COPA-203ENST00000481040 URB2Q14146 1524 aaKnown RBP2.45□□□□□ -2.02
COPA-203ENST00000481040 CACNA1GO43497 2377 aa2.45□□□□□ -2.02
COPA-203ENST00000481040 SCRIBQ14160 1630 aa2.45□□□□□ -2.02
COPA-203ENST00000481040 PCDH15Q96QU1 1955 aa2.45□□□□□ -2.02
COPA-203ENST00000481040 IFT140Q96RY7 1462 aa2.45□□□□□ -2.02
COPA-203ENST00000481040 FANCMQ8IYD8 2048 aa2.44□□□□□ -2.02
COPA-203ENST00000481040 CUX1P39880 1505 aa2.44□□□□□ -2.02
COPA-203ENST00000481040 TCRBV4S1A1TA0A5B7 111 aa2.44□□□□□ -2.02
COPA-203ENST00000481040 F8W036 122 aa2.44□□□□□ -2.02
COPA-203ENST00000481040 KRTAP5-8O75690 187 aa2.44□□□□□ -2.02
COPA-203ENST00000481040 EVI2AP22794 236 aa2.44□□□□□ -2.02
COPA-203ENST00000481040 HSD17B12Q53GQ0 312 aa2.44□□□□□ -2.02
COPA-203ENST00000481040 Q6ZRN7 208 aaPredicted RBP2.44□□□□□ -2.02
COPA-203ENST00000481040 OR4S1Q8NGB4 309 aa2.44□□□□□ -2.02
COPA-203ENST00000481040 Q96M85 177 aa2.44□□□□□ -2.02
COPA-203ENST00000481040 OR4C12Q96R67 309 aa2.44□□□□□ -2.02
COPA-203ENST00000481040 PAIP2BQ9ULR5 123 aaKnown RBP2.44□□□□□ -2.02
COPA-203ENST00000481040 U3KQ87 197 aa2.44□□□□□ -2.02
COPA-203ENST00000481040 FREM1Q5H8C1 2179 aa2.44□□□□□ -2.02
COPA-203ENST00000481040 BAZ2BQ9UIF8 2168 aaKnown RBP2.44□□□□□ -2.02
COPA-203ENST00000481040 GLI2P10070 1586 aa2.44□□□□□ -2.02
COPA-203ENST00000481040 KIAA0556O60303 1618 aa2.43□□□□□ -2.02
COPA-203ENST00000481040 A0A087WSZ3 146 aa2.43□□□□□ -2.02
COPA-203ENST00000481040 TRAV27A0A087WT01 109 aa2.43□□□□□ -2.02
COPA-203ENST00000481040 TRAV16A0A0A6YYK6 109 aaPredicted RBP2.43□□□□□ -2.02
COPA-203ENST00000481040 UQCRQO14949 82 aa2.43□□□□□ -2.02
COPA-203ENST00000481040 HBDP02042 147 aa2.43□□□□□ -2.02
COPA-203ENST00000481040 TCRAP04437 139 aa2.43□□□□□ -2.02
COPA-203ENST00000481040 SLC25A5P05141 298 aaKnown RBP2.43□□□□□ -2.02
COPA-203ENST00000481040 ARPINQ7Z6K5 226 aa2.43□□□□□ -2.02
COPA-203ENST00000481040 RPS19BP1Q86WX3 136 aaKnown RBP2.43□□□□□ -2.02
COPA-203ENST00000481040 TSTD1Q8NFU3 115 aa2.43□□□□□ -2.02
COPA-203ENST00000481040 MAGOHBQ96A72 148 aaKnown RBP2.43□□□□□ -2.02
COPA-203ENST00000481040 BANF2Q9H503 90 aa2.43□□□□□ -2.02
COPA-203ENST00000481040 CHCHD2Q9Y6H1 151 aaPredicted RBP2.43□□□□□ -2.02
COPA-203ENST00000481040 GBF1Q92538 1859 aa2.43□□□□□ -2.02
COPA-203ENST00000481040 DOCK10Q96BY6 2186 aa2.42□□□□□ -2.02
COPA-203ENST00000481040 TRAV10A0A0B4J240 114 aa2.42□□□□□ -2.02
COPA-203ENST00000481040 EFCAB10A6NFE3 127 aa2.42□□□□□ -2.02
COPA-203ENST00000481040 M0R2Z0 102 aa2.42□□□□□ -2.02
COPA-203ENST00000481040 C1orf137Q5JT78 98 aa2.42□□□□□ -2.02
COPA-203ENST00000481040 GLYATL3Q5SZD4 288 aa2.42□□□□□ -2.02
COPA-203ENST00000481040 CLEC2BQ92478 149 aa2.42□□□□□ -2.02
COPA-203ENST00000481040 TP53RKQ96S44 253 aa2.42□□□□□ -2.02
COPA-203ENST00000481040 GGACTQ9BVM4 153 aa2.42□□□□□ -2.02
COPA-203ENST00000481040 FKBP11Q9NYL4 201 aa2.42□□□□□ -2.02
COPA-203ENST00000481040 SOX21Q9Y651 276 aaPredicted RBP2.42□□□□□ -2.02
COPA-203ENST00000481040 GOLGB1Q14789 3259 aaKnown RBP2.42□□□□□ -2.02
COPA-203ENST00000481040 OVOS2A0A0J9YW53 1432 aa2.42□□□□□ -2.02
COPA-203ENST00000481040 OVOS2Q6IE36 1432 aa2.42□□□□□ -2.02
COPA-203ENST00000481040 NCOA3Q9Y6Q9 1424 aa2.42□□□□□ -2.02
COPA-203ENST00000481040 CCDC171Q6TFL3 1326 aa2.42□□□□□ -2.02
COPA-203ENST00000481040 CDK5RAP2Q96SN8 1893 aa2.41□□□□□ -2.02
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms