RNA–Protein interactions for RNA: ENST00000480744.2

LIMS3-203, Transcript of LIM zinc finger domain containing 3, humanhuman

APPRIS P1 TSL 5 BASIC

Gene LIMS3, Length 1,197 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS3-203ENST00000480744 BPIFA4PQ86YQ2 179 aa10.73□□□□□ -0.69
LIMS3-203ENST00000480744 C16orf74Q96GX8 76 aa10.73□□□□□ -0.69
LIMS3-203ENST00000480744 SLC50A1Q9BRV3 221 aa10.73□□□□□ -0.69
LIMS3-203ENST00000480744 GGACTQ9BVM4 153 aa10.73□□□□□ -0.69
LIMS3-203ENST00000480744 PARD6GQ9BYG4 376 aaPredicted RBP10.73□□□□□ -0.69
LIMS3-203ENST00000480744 NMES1Q9C002 83 aa10.73□□□□□ -0.69
LIMS3-203ENST00000480744 ZNF331Q9NQX6 463 aaPredicted RBP10.73□□□□□ -0.69
LIMS3-203ENST00000480744 PKD1P98161 4303 aa10.73□□□□□ -0.69
LIMS3-203ENST00000480744 CAV2P51636 162 aa10.72□□□□□ -0.69
LIMS3-203ENST00000480744 LRRC37A5PQ49AS3 106 aa10.72□□□□□ -0.69
LIMS3-203ENST00000480744 OR5AC2Q9NZP5 309 aa10.72□□□□□ -0.69
LIMS3-203ENST00000480744 DYNC1H1Q14204 4646 aaKnown RBP10.72□□□□□ -0.69
LIMS3-203ENST00000480744 MUC4Q99102 2169 aa10.72□□□□□ -0.69
LIMS3-203ENST00000480744 CBY3A6NI87 242 aa10.71□□□□□ -0.69
LIMS3-203ENST00000480744 SLC17A3O00476 420 aa10.71□□□□□ -0.69
LIMS3-203ENST00000480744 CST7O76096 145 aa10.71□□□□□ -0.69
LIMS3-203ENST00000480744 MED14OSP0DP75 135 aa10.71□□□□□ -0.69
LIMS3-203ENST00000480744 CAMLGP49069 296 aa10.71□□□□□ -0.69
LIMS3-203ENST00000480744 RAB31Q13636 194 aa10.71□□□□□ -0.69
LIMS3-203ENST00000480744 KIR3DS1Q14943 382 aa10.71□□□□□ -0.69
LIMS3-203ENST00000480744 OPCMLQ14982 345 aa10.71□□□□□ -0.69
LIMS3-203ENST00000480744 RGS21Q2M5E4 152 aa10.71□□□□□ -0.69
LIMS3-203ENST00000480744 MORN5Q5VZ52 161 aa10.71□□□□□ -0.69
LIMS3-203ENST00000480744 OR10J6PQ8NGY7 276 aa10.71□□□□□ -0.69
LIMS3-203ENST00000480744 TMEM37Q8WXS4 190 aa10.71□□□□□ -0.69
LIMS3-203ENST00000480744 NOP10Q9NPE3 64 aaKnown RBP10.71□□□□□ -0.69
LIMS3-203ENST00000480744 LYRM2Q9NU23 88 aaPredicted RBP10.71□□□□□ -0.69
LIMS3-203ENST00000480744 TIMM8BQ9Y5J9 83 aaPredicted RBP10.71□□□□□ -0.69
LIMS3-203ENST00000480744 DNAH11Q96DT5 4516 aa10.7□□□□□ -0.7
LIMS3-203ENST00000480744 PRAC2D3DTV9 90 aa10.7□□□□□ -0.7
LIMS3-203ENST00000480744 H7BYZ3 331 aa10.7□□□□□ -0.7
LIMS3-203ENST00000480744 J3KRW8 73 aa10.7□□□□□ -0.7
LIMS3-203ENST00000480744 FAM3BP58499 235 aaPredicted RBP10.7□□□□□ -0.7
LIMS3-203ENST00000480744 MIC13Q5XKP0 118 aa10.7□□□□□ -0.7
LIMS3-203ENST00000480744 Q6ZRG5 221 aa10.7□□□□□ -0.7
LIMS3-203ENST00000480744 TMEM252Q8N6L7 170 aa10.7□□□□□ -0.7
LIMS3-203ENST00000480744 TMEM263Q8WUH6 116 aaKnown RBP10.7□□□□□ -0.7
LIMS3-203ENST00000480744 H3BQ15 152 aa10.69□□□□□ -0.7
LIMS3-203ENST00000480744 ZNF493Q6ZR52 646 aa10.69□□□□□ -0.7
LIMS3-203ENST00000480744 PPP1R1CQ8WVI7 109 aa10.69□□□□□ -0.7
LIMS3-203ENST00000480744 DNAJC4Q9NNZ3 241 aa10.69□□□□□ -0.7
LIMS3-203ENST00000480744 UQCC1Q9NVA1 299 aa10.69□□□□□ -0.7
LIMS3-203ENST00000480744 PXMP4Q9Y6I8 212 aa10.69□□□□□ -0.7
LIMS3-203ENST00000480744 TRAV5A0A0B4J249 113 aa10.68□□□□□ -0.7
LIMS3-203ENST00000480744 UBE2L5PA0A1B0GUS4 154 aa10.68□□□□□ -0.7
LIMS3-203ENST00000480744 IGLC2P0DOY2 106 aa10.68□□□□□ -0.7
LIMS3-203ENST00000480744 PVALBP20472 110 aaPredicted RBP10.68□□□□□ -0.7
LIMS3-203ENST00000480744 CCL18P55774 89 aa10.68□□□□□ -0.7
LIMS3-203ENST00000480744 CLINT1Q14677 625 aa10.68□□□□□ -0.7
LIMS3-203ENST00000480744 GFI1BQ5VTD9 330 aa10.68□□□□□ -0.7
LIMS3-203ENST00000480744 ZNF575Q86XF7 245 aa10.68□□□□□ -0.7
LIMS3-203ENST00000480744 CCDC28AQ8IWP9 274 aa10.68□□□□□ -0.7
LIMS3-203ENST00000480744 RNASE8Q8TDE3 154 aaKnown RBP10.68□□□□□ -0.7
LIMS3-203ENST00000480744 RNF141Q8WVD5 230 aa10.68□□□□□ -0.7
LIMS3-203ENST00000480744 C20orf144Q9BQM9 153 aa10.68□□□□□ -0.7
LIMS3-203ENST00000480744 NBDYA0A0U1RRE5 68 aa10.67□□□□□ -0.7
LIMS3-203ENST00000480744 SULT1A1P50225 295 aa10.67□□□□□ -0.7
LIMS3-203ENST00000480744 CYCSP99999 105 aaKnown RBP10.67□□□□□ -0.7
LIMS3-203ENST00000480744 NHLH2Q02577 135 aa10.67□□□□□ -0.7
LIMS3-203ENST00000480744 BAXQ07812 192 aa10.67□□□□□ -0.7
LIMS3-203ENST00000480744 OR5I1Q13606 314 aa10.67□□□□□ -0.7
LIMS3-203ENST00000480744 OR1L4Q8NGR5 311 aa10.67□□□□□ -0.7
LIMS3-203ENST00000480744 ZNRF2Q8NHG8 242 aa10.67□□□□□ -0.7
LIMS3-203ENST00000480744 WDR83OSQ9Y284 106 aa10.67□□□□□ -0.7
LIMS3-203ENST00000480744 TRAV12-3A0A0B4J271 114 aa10.66□□□□□ -0.7
LIMS3-203ENST00000480744 E5RGE8 158 aa10.66□□□□□ -0.7
LIMS3-203ENST00000480744 MPC2O95563 127 aa10.66□□□□□ -0.7
LIMS3-203ENST00000480744 LEPP41159 167 aa10.66□□□□□ -0.7
LIMS3-203ENST00000480744 VWC2Q2TAL6 325 aa10.66□□□□□ -0.7
LIMS3-203ENST00000480744 SAT2Q96F10 170 aaPredicted RBP10.66□□□□□ -0.7
LIMS3-203ENST00000480744 PFDN5Q99471 154 aa10.66□□□□□ -0.7
LIMS3-203ENST00000480744 LINC00588Q9Y4M8 146 aa10.66□□□□□ -0.7
LIMS3-203ENST00000480744 A0A0J9YY99 117 aa10.65□□□□□ -0.7
LIMS3-203ENST00000480744 GAGE12BA1L429 117 aa10.65□□□□□ -0.7
LIMS3-203ENST00000480744 SNURFLB1AK76 121 aa10.65□□□□□ -0.7
LIMS3-203ENST00000480744 GAGE7O76087 117 aa10.65□□□□□ -0.7
LIMS3-203ENST00000480744 RLN2P04090 185 aa10.65□□□□□ -0.7
LIMS3-203ENST00000480744 GAGE12FP0CL80 117 aa10.65□□□□□ -0.7
LIMS3-203ENST00000480744 GAGE12GP0CL81 117 aa10.65□□□□□ -0.7
LIMS3-203ENST00000480744 GAGE12IP0CL82 117 aa10.65□□□□□ -0.7
LIMS3-203ENST00000480744 CT45A10P0DMU9 189 aa10.65□□□□□ -0.7
LIMS3-203ENST00000480744 GUK1Q16774 197 aa10.65□□□□□ -0.7
LIMS3-203ENST00000480744 STX12Q86Y82 276 aa10.65□□□□□ -0.7
LIMS3-203ENST00000480744 C6orf223Q8N319 242 aa10.65□□□□□ -0.7
LIMS3-203ENST00000480744 GNPNAT1Q96EK6 184 aaPredicted RBP10.65□□□□□ -0.7
LIMS3-203ENST00000480744 MED28Q9H204 178 aa10.65□□□□□ -0.7
LIMS3-203ENST00000480744 SLC39A9Q9NUM3 307 aa10.65□□□□□ -0.7
LIMS3-203ENST00000480744 ZNF586Q9NXT0 402 aa10.65□□□□□ -0.7
LIMS3-203ENST00000480744 MBD2Q9UBB5 411 aa10.65□□□□□ -0.7
LIMS3-203ENST00000480744 TRAV26-1A0A087WT03 109 aa10.64□□□□□ -0.71
LIMS3-203ENST00000480744 NPIPB6E9PJ23 425 aa10.64□□□□□ -0.71
LIMS3-203ENST00000480744 FGF7P21781 194 aa10.64□□□□□ -0.71
LIMS3-203ENST00000480744 S100A11P31949 105 aa10.64□□□□□ -0.71
LIMS3-203ENST00000480744 HBG1P69891 147 aa10.64□□□□□ -0.71
LIMS3-203ENST00000480744 HBG2P69892 147 aa10.64□□□□□ -0.71
LIMS3-203ENST00000480744 TNP2Q05952 138 aa10.64□□□□□ -0.71
LIMS3-203ENST00000480744 SSX7Q7RTT5 188 aa10.64□□□□□ -0.71
LIMS3-203ENST00000480744 M6PRP20645 277 aa10.63□□□□□ -0.71
LIMS3-203ENST00000480744 RPL29P47914 159 aaKnown RBP10.63□□□□□ -0.71
LIMS3-203ENST00000480744 Q5BKY6 102 aa10.63□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms