RNA–Protein interactions for RNA: ENST00000480598.1

LIMS4-202, Transcript of LIM zinc finger domain containing 4, humanhuman

TSL 1 (best)

Gene LIMS4, Length 679 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS4-202ENST00000480598 LRRC37A5PQ49AS3 106 aa10.54□□□□□ -0.72
LIMS4-202ENST00000480598 TMEM88Q6PEY1 159 aa10.54□□□□□ -0.72
LIMS4-202ENST00000480598 FAM210BQ96KR6 192 aa10.54□□□□□ -0.72
LIMS4-202ENST00000480598 ZNF586Q9NXT0 402 aa10.54□□□□□ -0.72
LIMS4-202ENST00000480598 OR5AC2Q9NZP5 309 aa10.54□□□□□ -0.72
LIMS4-202ENST00000480598 FAT2Q9NYQ8 4349 aa10.53□□□□□ -0.72
LIMS4-202ENST00000480598 LYRM9A8MSI8 78 aa10.53□□□□□ -0.72
LIMS4-202ENST00000480598 INMT-MINDY4F8WBC2 141 aa10.53□□□□□ -0.72
LIMS4-202ENST00000480598 H0YIZ8 118 aa10.53□□□□□ -0.72
LIMS4-202ENST00000480598 DEFB130BP0DP73 79 aa10.53□□□□□ -0.72
LIMS4-202ENST00000480598 DEFB130AP0DP74 79 aa10.53□□□□□ -0.72
LIMS4-202ENST00000480598 TAS2R60P59551 318 aa10.53□□□□□ -0.72
LIMS4-202ENST00000480598 GCSAMLQ5JQS6 135 aa10.53□□□□□ -0.72
LIMS4-202ENST00000480598 TMEM256Q8N2U0 113 aa10.53□□□□□ -0.72
LIMS4-202ENST00000480598 OR10J6PQ8NGY7 276 aa10.53□□□□□ -0.72
LIMS4-202ENST00000480598 THAP6Q8TBB0 222 aa10.53□□□□□ -0.72
LIMS4-202ENST00000480598 CHAC2Q8WUX2 184 aa10.53□□□□□ -0.72
LIMS4-202ENST00000480598 NPCDR1Q9BY65 106 aa10.53□□□□□ -0.72
LIMS4-202ENST00000480598 J3KRW8 73 aa10.52□□□□□ -0.73
LIMS4-202ENST00000480598 M0R2N4 97 aa10.52□□□□□ -0.73
LIMS4-202ENST00000480598 GUK1Q16774 197 aa10.52□□□□□ -0.73
LIMS4-202ENST00000480598 GFI1BQ5VTD9 330 aa10.52□□□□□ -0.73
LIMS4-202ENST00000480598 UBE2DNLQ8IWF7 75 aa10.52□□□□□ -0.73
LIMS4-202ENST00000480598 OR5C1Q8NGR4 320 aa10.52□□□□□ -0.73
LIMS4-202ENST00000480598 NMES1Q9C002 83 aa10.52□□□□□ -0.73
LIMS4-202ENST00000480598 DNAH17Q9UFH2 4485 aa10.51□□□□□ -0.73
LIMS4-202ENST00000480598 E5RGE8 158 aa10.51□□□□□ -0.73
LIMS4-202ENST00000480598 M0R3E3 92 aa10.51□□□□□ -0.73
LIMS4-202ENST00000480598 PRAF2O60831 178 aa10.51□□□□□ -0.73
LIMS4-202ENST00000480598 MPDU1O75352 247 aa10.51□□□□□ -0.73
LIMS4-202ENST00000480598 RLN2P04090 185 aa10.51□□□□□ -0.73
LIMS4-202ENST00000480598 PYYP10082 97 aa10.51□□□□□ -0.73
LIMS4-202ENST00000480598 CLINT1Q14677 625 aa10.51□□□□□ -0.73
LIMS4-202ENST00000480598 C16orf74Q96GX8 76 aa10.51□□□□□ -0.73
LIMS4-202ENST00000480598 SLC25A31Q9H0C2 315 aa10.51□□□□□ -0.73
LIMS4-202ENST00000480598 TRBV19A0A075B6N1 114 aa10.5□□□□□ -0.73
LIMS4-202ENST00000480598 H7BYZ3 331 aa10.5□□□□□ -0.73
LIMS4-202ENST00000480598 CT45A10P0DMU9 189 aa10.5□□□□□ -0.73
LIMS4-202ENST00000480598 H2BFSP57053 126 aa10.5□□□□□ -0.73
LIMS4-202ENST00000480598 RNASE8Q8TDE3 154 aaKnown RBP10.5□□□□□ -0.73
LIMS4-202ENST00000480598 MARVELD1Q9BSK0 173 aa10.5□□□□□ -0.73
LIMS4-202ENST00000480598 TMEM14CQ9P0S9 112 aa10.5□□□□□ -0.73
LIMS4-202ENST00000480598 IGLV2-18A0A075B6J9 118 aa10.49□□□□□ -0.73
LIMS4-202ENST00000480598 NPIPB6E9PJ23 425 aa10.49□□□□□ -0.73
LIMS4-202ENST00000480598 ZNF253O75346 499 aa10.49□□□□□ -0.73
LIMS4-202ENST00000480598 NDUFB4O95168 129 aa10.49□□□□□ -0.73
LIMS4-202ENST00000480598 HIST1H1EP10412 219 aaKnown RBP10.49□□□□□ -0.73
LIMS4-202ENST00000480598 MIR17HGQ75NE6 70 aa10.49□□□□□ -0.73
LIMS4-202ENST00000480598 TMEM263Q8WUH6 116 aaKnown RBP10.49□□□□□ -0.73
LIMS4-202ENST00000480598 BLNKQ8WV28 456 aa10.49□□□□□ -0.73
LIMS4-202ENST00000480598 C20orf144Q9BQM9 153 aa10.49□□□□□ -0.73
LIMS4-202ENST00000480598 SLC25A2Q9BXI2 301 aa10.49□□□□□ -0.73
LIMS4-202ENST00000480598 NOP10Q9NPE3 64 aaKnown RBP10.49□□□□□ -0.73
LIMS4-202ENST00000480598 NACAE9PAV3 2078 aa10.48□□□□□ -0.73
LIMS4-202ENST00000480598 F5H768 121 aa10.48□□□□□ -0.73
LIMS4-202ENST00000480598 LEPP41159 167 aa10.48□□□□□ -0.73
LIMS4-202ENST00000480598 CYCSP99999 105 aaKnown RBP10.48□□□□□ -0.73
LIMS4-202ENST00000480598 ERCC8Q13216 396 aa10.48□□□□□ -0.73
LIMS4-202ENST00000480598 EXOC3-AS1Q8N2X6 119 aa10.48□□□□□ -0.73
LIMS4-202ENST00000480598 PPP1R1CQ8WVI7 109 aa10.48□□□□□ -0.73
LIMS4-202ENST00000480598 MRPL53Q96EL3 112 aaKnown RBP10.48□□□□□ -0.73
LIMS4-202ENST00000480598 FAM167A-AS1Q96KT0 104 aa10.48□□□□□ -0.73
LIMS4-202ENST00000480598 ODF3Q96PU9 254 aa10.48□□□□□ -0.73
LIMS4-202ENST00000480598 WDR61Q9GZS3 305 aaKnown RBP10.48□□□□□ -0.73
LIMS4-202ENST00000480598 TIMM9Q9Y5J7 89 aa10.48□□□□□ -0.73
LIMS4-202ENST00000480598 TIMM8BQ9Y5J9 83 aaPredicted RBP10.48□□□□□ -0.73
LIMS4-202ENST00000480598 TRAV12-3A0A0B4J271 114 aa10.47□□□□□ -0.73
LIMS4-202ENST00000480598 SSNA1O43805 119 aa10.47□□□□□ -0.73
LIMS4-202ENST00000480598 ATP5G1P05496 136 aa10.47□□□□□ -0.73
LIMS4-202ENST00000480598 ATP5G3P48201 142 aa10.47□□□□□ -0.73
LIMS4-202ENST00000480598 ZNF493Q6ZR52 646 aa10.47□□□□□ -0.73
LIMS4-202ENST00000480598 C15orf53Q8NAA6 179 aa10.47□□□□□ -0.73
LIMS4-202ENST00000480598 CBY3A6NI87 242 aa10.46□□□□□ -0.73
LIMS4-202ENST00000480598 DEFA1P59665 94 aa10.46□□□□□ -0.73
LIMS4-202ENST00000480598 DEFA3P59666 94 aa10.46□□□□□ -0.73
LIMS4-202ENST00000480598 PDE6HQ13956 83 aa10.46□□□□□ -0.73
LIMS4-202ENST00000480598 LGALS9BQ3B8N2 356 aa10.46□□□□□ -0.73
LIMS4-202ENST00000480598 RNF212Q495C1 297 aa10.46□□□□□ -0.73
LIMS4-202ENST00000480598 CCDC28AQ8IWP9 274 aa10.46□□□□□ -0.73
LIMS4-202ENST00000480598 PRELID1Q9Y255 219 aa10.46□□□□□ -0.73
LIMS4-202ENST00000480598 RTL8CO15255 209 aa10.45□□□□□ -0.74
LIMS4-202ENST00000480598 MPC2O95563 127 aa10.45□□□□□ -0.74
LIMS4-202ENST00000480598 NUDT3O95989 172 aa10.45□□□□□ -0.74
LIMS4-202ENST00000480598 ICAM4Q14773 271 aa10.45□□□□□ -0.74
LIMS4-202ENST00000480598 LINC00336Q6ZUF6 198 aa10.45□□□□□ -0.74
LIMS4-202ENST00000480598 SMIM3Q9BZL3 60 aa10.45□□□□□ -0.74
LIMS4-202ENST00000480598 AGPAT4-IT1Q9H0P7 198 aa10.45□□□□□ -0.74
LIMS4-202ENST00000480598 IGKV2-40A0A087WW87 121 aaPredicted RBP10.44□□□□□ -0.74
LIMS4-202ENST00000480598 IGKV2D-40P01614 121 aaPredicted RBP10.44□□□□□ -0.74
LIMS4-202ENST00000480598 OR10J4P0C629 311 aa10.44□□□□□ -0.74
LIMS4-202ENST00000480598 BTN1A1Q13410 526 aa10.44□□□□□ -0.74
LIMS4-202ENST00000480598 FAM122CQ6P4D5 195 aa10.44□□□□□ -0.74
LIMS4-202ENST00000480598 Q6ZR54 194 aa10.44□□□□□ -0.74
LIMS4-202ENST00000480598 FXYD5Q96DB9 178 aa10.44□□□□□ -0.74
LIMS4-202ENST00000480598 ATP5SQ99766 215 aa10.44□□□□□ -0.74
LIMS4-202ENST00000480598 PAXXQ9BUH6 204 aa10.44□□□□□ -0.74
LIMS4-202ENST00000480598 MRPL32Q9BYC8 188 aaKnown RBP10.44□□□□□ -0.74
LIMS4-202ENST00000480598 OR51M1Q9H341 326 aa10.44□□□□□ -0.74
LIMS4-202ENST00000480598 AAMDCQ9H7C9 122 aa10.44□□□□□ -0.74
LIMS4-202ENST00000480598 KCNIP2Q9NS61 270 aa10.44□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms