RNA–Protein interactions for RNA: ENST00000480468.1

SIK3-210, Transcript of SIK family kinase 3, humanhuman

TSL 1 (best)

Gene SIK3, Length 2,237 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIK3-210ENST00000480468 PLGLAQ15195 96 aa8.38□□□□□ -1.07
SIK3-210ENST00000480468 SPRNQ5BIV9 151 aa8.38□□□□□ -1.07
SIK3-210ENST00000480468 C8orf31Q8N9H6 132 aa8.38□□□□□ -1.07
SIK3-210ENST00000480468 RNF185Q96GF1 192 aa8.38□□□□□ -1.07
SIK3-210ENST00000480468 ANAPC13Q9BS18 74 aa8.38□□□□□ -1.07
SIK3-210ENST00000480468 DEFB127Q9H1M4 99 aa8.38□□□□□ -1.07
SIK3-210ENST00000480468 AGRNO00468 2067 aa8.37□□□□□ -1.07
SIK3-210ENST00000480468 NCBP2LA6PVI3 153 aaKnown RBP8.37□□□□□ -1.07
SIK3-210ENST00000480468 K7EMI3 77 aa8.37□□□□□ -1.07
SIK3-210ENST00000480468 K7ESF4 209 aa8.37□□□□□ -1.07
SIK3-210ENST00000480468 HOXA3O43365 443 aaPredicted RBP8.37□□□□□ -1.07
SIK3-210ENST00000480468 GATA3P23771 443 aa8.37□□□□□ -1.07
SIK3-210ENST00000480468 PLNP26678 52 aa8.37□□□□□ -1.07
SIK3-210ENST00000480468 HCP5Q6MZN7 132 aa8.37□□□□□ -1.07
SIK3-210ENST00000480468 Q8N8P6 123 aa8.37□□□□□ -1.07
SIK3-210ENST00000480468 C8orf49Q96NF6 230 aa8.37□□□□□ -1.07
SIK3-210ENST00000480468 PRR14LQ5THK1 2151 aa8.37□□□□□ -1.07
SIK3-210ENST00000480468 FRYQ5TBA9 3013 aa8.37□□□□□ -1.07
SIK3-210ENST00000480468 H3BRN7 92 aa8.37□□□□□ -1.07
SIK3-210ENST00000480468 IL4P05112 153 aa8.37□□□□□ -1.07
SIK3-210ENST00000480468 PDE6HQ13956 83 aa8.37□□□□□ -1.07
SIK3-210ENST00000480468 MSMPQ1L6U9 139 aa8.37□□□□□ -1.07
SIK3-210ENST00000480468 LYRM7Q5U5X0 104 aa8.37□□□□□ -1.07
SIK3-210ENST00000480468 TEN1Q86WV5 123 aa8.37□□□□□ -1.07
SIK3-210ENST00000480468 LINC00311Q8N616 119 aa8.37□□□□□ -1.07
SIK3-210ENST00000480468 TMEM133Q9H2Q1 129 aa8.37□□□□□ -1.07
SIK3-210ENST00000480468 A0A087WX48 190 aa8.36□□□□□ -1.07
SIK3-210ENST00000480468 TRAV40A0A0B4J280 105 aa8.36□□□□□ -1.07
SIK3-210ENST00000480468 TNFRSF6BO95407 300 aa8.36□□□□□ -1.07
SIK3-210ENST00000480468 PPIFP30405 207 aaKnown RBP8.36□□□□□ -1.07
SIK3-210ENST00000480468 RPL27AP46776 148 aaKnown RBP8.36□□□□□ -1.07
SIK3-210ENST00000480468 FAM201AQ5SY85 155 aa8.36□□□□□ -1.07
SIK3-210ENST00000480468 ZFAND6Q6FIF0 208 aa8.36□□□□□ -1.07
SIK3-210ENST00000480468 RPEQ96AT9 228 aa8.36□□□□□ -1.07
SIK3-210ENST00000480468 TMEM160Q9NX00 188 aa8.36□□□□□ -1.07
SIK3-210ENST00000480468 MRPL35Q9NZE8 188 aaKnown RBP8.36□□□□□ -1.07
SIK3-210ENST00000480468 SS18L2Q9UHA2 77 aa8.36□□□□□ -1.07
SIK3-210ENST00000480468 NBEAQ8NFP9 2946 aa8.36□□□□□ -1.07
SIK3-210ENST00000480468 WDFY3Q8IZQ1 3526 aa8.35□□□□□ -1.07
SIK3-210ENST00000480468 TMEM262E9PQX1 116 aa8.35□□□□□ -1.07
SIK3-210ENST00000480468 MRPS12O15235 138 aaKnown RBP8.35□□□□□ -1.07
SIK3-210ENST00000480468 SBSPONQ8IVN8 264 aa8.35□□□□□ -1.07
SIK3-210ENST00000480468 FAM216BQ8N7L0 139 aa8.35□□□□□ -1.07
SIK3-210ENST00000480468 CCL13Q99616 98 aa8.35□□□□□ -1.07
SIK3-210ENST00000480468 IGLV2-18A0A075B6J9 118 aa8.35□□□□□ -1.07
SIK3-210ENST00000480468 TMSB15BA0A087X1C1 80 aa8.35□□□□□ -1.07
SIK3-210ENST00000480468 CD40P25942 277 aa8.35□□□□□ -1.07
SIK3-210ENST00000480468 C17orf77Q96MU5 243 aa8.35□□□□□ -1.07
SIK3-210ENST00000480468 ASCL2Q99929 193 aa8.35□□□□□ -1.07
SIK3-210ENST00000480468 RASL11BQ9BPW5 248 aa8.35□□□□□ -1.07
SIK3-210ENST00000480468 FAM110AQ9BQ89 295 aa8.35□□□□□ -1.07
SIK3-210ENST00000480468 TPSG1Q9NRR2 321 aa8.35□□□□□ -1.07
SIK3-210ENST00000480468 RALYQ9UKM9 306 aaKnown RBP8.35□□□□□ -1.07
SIK3-210ENST00000480468 TRAV12-1A0A0B4J245 112 aa8.34□□□□□ -1.07
SIK3-210ENST00000480468 MYMXA0A1B0GTQ4 84 aa8.34□□□□□ -1.07
SIK3-210ENST00000480468 RBP4P02753 201 aa8.34□□□□□ -1.07
SIK3-210ENST00000480468 WT1P19544 449 aaPredicted RBP8.34□□□□□ -1.07
SIK3-210ENST00000480468 CXCL12P48061 93 aa8.34□□□□□ -1.07
SIK3-210ENST00000480468 UBE2D3P61077 147 aa8.34□□□□□ -1.07
SIK3-210ENST00000480468 UBE2D2P62837 147 aa8.34□□□□□ -1.07
SIK3-210ENST00000480468 CARD19Q96LW7 228 aa8.34□□□□□ -1.07
SIK3-210ENST00000480468 CITED1Q99966 193 aa8.34□□□□□ -1.07
SIK3-210ENST00000480468 SPRY4Q9C004 299 aa8.34□□□□□ -1.07
SIK3-210ENST00000480468 SPRY3O43610 288 aa8.34□□□□□ -1.07
SIK3-210ENST00000480468 IGKV1-17P01599 117 aa8.34□□□□□ -1.07
SIK3-210ENST00000480468 SRD5A1P18405 259 aa8.34□□□□□ -1.07
SIK3-210ENST00000480468 UBE2D1P51668 147 aa8.34□□□□□ -1.07
SIK3-210ENST00000480468 TEX36Q5VZQ5 186 aa8.34□□□□□ -1.07
SIK3-210ENST00000480468 TEX29Q8N6K0 151 aa8.34□□□□□ -1.07
SIK3-210ENST00000480468 MYOZ3Q8TDC0 251 aa8.34□□□□□ -1.07
SIK3-210ENST00000480468 GLMPQ8WWB7 406 aa8.34□□□□□ -1.07
SIK3-210ENST00000480468 AAMDCQ9H7C9 122 aa8.34□□□□□ -1.07
SIK3-210ENST00000480468 CACNA1GO43497 2377 aa8.34□□□□□ -1.07
SIK3-210ENST00000480468 IGLV3-9A0A075B6K5 115 aa8.33□□□□□ -1.08
SIK3-210ENST00000480468 PRSS29PA6NIE9 313 aa8.33□□□□□ -1.08
SIK3-210ENST00000480468 I3L2K1 104 aa8.33□□□□□ -1.08
SIK3-210ENST00000480468 M0R3E3 92 aa8.33□□□□□ -1.08
SIK3-210ENST00000480468 ZNF688P0C7X2 276 aa8.33□□□□□ -1.08
SIK3-210ENST00000480468 EGR2P11161 476 aaPredicted RBP8.33□□□□□ -1.08
SIK3-210ENST00000480468 GLRXP35754 106 aa8.33□□□□□ -1.08
SIK3-210ENST00000480468 CNEP1R1Q8N9A8 125 aa8.33□□□□□ -1.08
SIK3-210ENST00000480468 RAI1Q7Z5J4 1906 aaPredicted RBP8.33□□□□□ -1.08
SIK3-210ENST00000480468 IGHV3-21A0A0B4J1V1 117 aa8.33□□□□□ -1.08
SIK3-210ENST00000480468 CRYGBP07316 175 aa8.33□□□□□ -1.08
SIK3-210ENST00000480468 DEFB108BQ8NET1 73 aa8.33□□□□□ -1.08
SIK3-210ENST00000480468 PSMG3-AS1Q96PY0 264 aa8.33□□□□□ -1.08
SIK3-210ENST00000480468 PRR25Q96S07 402 aa8.33□□□□□ -1.08
SIK3-210ENST00000480468 SPANXA1Q9NS26 97 aa8.33□□□□□ -1.08
SIK3-210ENST00000480468 TRBV20-1A0A075B6N2 111 aa8.32□□□□□ -1.08
SIK3-210ENST00000480468 M0QXV9 152 aa8.32□□□□□ -1.08
SIK3-210ENST00000480468 SLC25A15Q9Y619 301 aa8.32□□□□□ -1.08
SIK3-210ENST00000480468 TRBV7-9A0A0J9YWB2 115 aa8.31□□□□□ -1.08
SIK3-210ENST00000480468 F8VRH5 84 aa8.31□□□□□ -1.08
SIK3-210ENST00000480468 H7C1H1 209 aa8.31□□□□□ -1.08
SIK3-210ENST00000480468 DIAPH2-AS1Q14236 149 aa8.31□□□□□ -1.08
SIK3-210ENST00000480468 LAGE3Q14657 143 aa8.31□□□□□ -1.08
SIK3-210ENST00000480468 PMS2CLQ68D20 193 aa8.31□□□□□ -1.08
SIK3-210ENST00000480468 ZNF575Q86XF7 245 aa8.31□□□□□ -1.08
SIK3-210ENST00000480468 OR11H6Q8NGC7 330 aa8.31□□□□□ -1.08
SIK3-210ENST00000480468 UFC1Q9Y3C8 167 aa8.31□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 105.7 ms