RNA–Protein interactions for RNA: ENST00000480227.5

PKD1-213, Transcript of polycystin 1, transient receptor potential channel interacting, humanhuman

TSL 1 (best)

Gene PKD1, Length 2,353 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKD1-213ENST00000480227 KLHDC1Q8N7A1 406 aa13.35□□□□□ -0.27
PKD1-213ENST00000480227 CHCHD1Q96BP2 118 aaKnown RBP13.35□□□□□ -0.27
PKD1-213ENST00000480227 TIMM8BQ9Y5J9 83 aaPredicted RBP13.35□□□□□ -0.27
PKD1-213ENST00000480227 GNLYP22749 145 aa13.34□□□□□ -0.27
PKD1-213ENST00000480227 UBE2E1P51965 193 aa13.34□□□□□ -0.27
PKD1-213ENST00000480227 LMO4P61968 165 aa13.34□□□□□ -0.27
PKD1-213ENST00000480227 HNRNPA3P51991 378 aaKnown RBP13.34□□□□□ -0.27
PKD1-213ENST00000480227 RIGQ13278 110 aa13.34□□□□□ -0.27
PKD1-213ENST00000480227 CRYBG3Q68DQ2 2970 aa13.33□□□□□ -0.28
PKD1-213ENST00000480227 FLNCQ14315 2725 aa13.33□□□□□ -0.28
PKD1-213ENST00000480227 TRAV9-2A0A087WT02 112 aa13.33□□□□□ -0.28
PKD1-213ENST00000480227 LEPROTL1O95214 131 aa13.33□□□□□ -0.28
PKD1-213ENST00000480227 RPL7P18124 248 aaKnown RBP13.33□□□□□ -0.28
PKD1-213ENST00000480227 MUC21A0A0G2JKD1 596 aa13.32□□□□□ -0.28
PKD1-213ENST00000480227 MUC21A0A140T8X8 626 aa13.32□□□□□ -0.28
PKD1-213ENST00000480227 LINC01548A6NM66 108 aa13.32□□□□□ -0.28
PKD1-213ENST00000480227 ATP6V0E1O15342 81 aa13.32□□□□□ -0.28
PKD1-213ENST00000480227 TFPI2P48307 235 aa13.32□□□□□ -0.28
PKD1-213ENST00000480227 PSG9Q00887 426 aa13.32□□□□□ -0.28
PKD1-213ENST00000480227 MUC21Q5SSG8 566 aa13.32□□□□□ -0.28
PKD1-213ENST00000480227 UNQ5815/PRO19632Q6UWF5 114 aa13.32□□□□□ -0.28
PKD1-213ENST00000480227 PIP4P2Q8N4L2 257 aa13.32□□□□□ -0.28
PKD1-213ENST00000480227 PRORYQ9H606 182 aa13.32□□□□□ -0.28
PKD1-213ENST00000480227 RABAC1Q9UI14 185 aa13.32□□□□□ -0.28
PKD1-213ENST00000480227 IGLL1P15814 213 aa13.32□□□□□ -0.28
PKD1-213ENST00000480227 HLA-DMBP28068 263 aa13.32□□□□□ -0.28
PKD1-213ENST00000480227 GPR183P32249 361 aa13.32□□□□□ -0.28
PKD1-213ENST00000480227 C15orf32Q32M92 178 aa13.32□□□□□ -0.28
PKD1-213ENST00000480227 Q8TAT8 98 aa13.32□□□□□ -0.28
PKD1-213ENST00000480227 SMAD5-AS1Q9Y6J3 95 aa13.32□□□□□ -0.28
PKD1-213ENST00000480227 RELQ04864 619 aaPredicted RBP13.31□□□□□ -0.28
PKD1-213ENST00000480227 TMEM190Q8WZ59 177 aa13.31□□□□□ -0.28
PKD1-213ENST00000480227 G3V318 75 aa13.31□□□□□ -0.28
PKD1-213ENST00000480227 H0Y8G0 127 aa13.31□□□□□ -0.28
PKD1-213ENST00000480227 SYS1-DBNDD2H3BUS1 97 aa13.31□□□□□ -0.28
PKD1-213ENST00000480227 SH2D1AO60880 128 aa13.31□□□□□ -0.28
PKD1-213ENST00000480227 IGHV3OR16-10A0A075B7F0 116 aa13.3□□□□□ -0.28
PKD1-213ENST00000480227 SERTM2A0A1B0GWG4 89 aa13.3□□□□□ -0.28
PKD1-213ENST00000480227 TMEM189A5PLL7 270 aa13.3□□□□□ -0.28
PKD1-213ENST00000480227 LYZL1Q6UWQ5 148 aa13.3□□□□□ -0.28
PKD1-213ENST00000480227 VGLL1Q99990 258 aa13.3□□□□□ -0.28
PKD1-213ENST00000480227 MCRIP2Q9BUT9 160 aaKnown RBP13.3□□□□□ -0.28
PKD1-213ENST00000480227 OR4C46A6NHA9 309 aa13.3□□□□□ -0.28
PKD1-213ENST00000480227 SCGB2A1O75556 95 aa13.3□□□□□ -0.28
PKD1-213ENST00000480227 LAMTOR2Q9Y2Q5 125 aa13.3□□□□□ -0.28
PKD1-213ENST00000480227 TMEM213A2RRL7 107 aa13.29□□□□□ -0.28
PKD1-213ENST00000480227 CLEC3BP05452 202 aa13.29□□□□□ -0.28
PKD1-213ENST00000480227 TSPOP30536 169 aa13.29□□□□□ -0.28
PKD1-213ENST00000480227 RHOGP84095 191 aa13.29□□□□□ -0.28
PKD1-213ENST00000480227 CSMD2Q7Z408 3487 aa13.29□□□□□ -0.28
PKD1-213ENST00000480227 COL5A1-AS1Q5SY13 56 aa13.29□□□□□ -0.28
PKD1-213ENST00000480227 FAM110DQ8TAY7 271 aaPredicted RBP13.29□□□□□ -0.28
PKD1-213ENST00000480227 PRR25Q96S07 402 aa13.29□□□□□ -0.28
PKD1-213ENST00000480227 TMEM208Q9BTX3 173 aa13.29□□□□□ -0.28
PKD1-213ENST00000480227 UTP20O75691 2785 aaKnown RBP13.29□□□□□ -0.28
PKD1-213ENST00000480227 IGHV3-66A0A0C4DH42 116 aa13.28□□□□□ -0.28
PKD1-213ENST00000480227 CRXO43186 299 aaPredicted RBP13.28□□□□□ -0.28
PKD1-213ENST00000480227 IGHG4P01861 327 aa13.28□□□□□ -0.28
PKD1-213ENST00000480227 Q6AWC8 147 aa13.28□□□□□ -0.28
PKD1-213ENST00000480227 STPG4Q8N801 248 aa13.28□□□□□ -0.28
PKD1-213ENST00000480227 ZNF502Q8TBZ5 544 aa13.28□□□□□ -0.28
PKD1-213ENST00000480227 TP73-AS1Q9UF72 201 aa13.28□□□□□ -0.28
PKD1-213ENST00000480227 IGHV3OR16-13A0A075B7E8 117 aa13.28□□□□□ -0.28
PKD1-213ENST00000480227 IGHV3-74A0A0B4J1X5 117 aa13.28□□□□□ -0.28
PKD1-213ENST00000480227 NPFFO15130 113 aa13.28□□□□□ -0.28
PKD1-213ENST00000480227 TMEM219Q86XT9 240 aa13.28□□□□□ -0.28
PKD1-213ENST00000480227 CENPVL3A0A0U1RRI6 287 aa13.27□□□□□ -0.29
PKD1-213ENST00000480227 IGHV4-39P01824 125 aa13.27□□□□□ -0.29
PKD1-213ENST00000480227 ZNF80P51504 273 aaPredicted RBP13.27□□□□□ -0.29
PKD1-213ENST00000480227 SAPCD1Q5SSQ6 148 aa13.27□□□□□ -0.29
PKD1-213ENST00000480227 A0A1B0GW15 77 aa13.27□□□□□ -0.29
PKD1-213ENST00000480227 hDV102S1A0JD36 115 aa13.27□□□□□ -0.29
PKD1-213ENST00000480227 SFTPCP11686 197 aa13.27□□□□□ -0.29
PKD1-213ENST00000480227 PRSS3P2Q8NHM4 247 aa13.27□□□□□ -0.29
PKD1-213ENST00000480227 AP5S1Q9NUS5 200 aa13.27□□□□□ -0.29
PKD1-213ENST00000480227 USP9XQ93008 2570 aaPredicted RBP13.26□□□□□ -0.29
PKD1-213ENST00000480227 ACACBO00763 2458 aa13.26□□□□□ -0.29
PKD1-213ENST00000480227 HINT1P49773 126 aaPredicted RBP13.26□□□□□ -0.29
PKD1-213ENST00000480227 CLEC19AQ6UXS0 136 aa13.26□□□□□ -0.29
PKD1-213ENST00000480227 AMN1Q8IY45 258 aa13.26□□□□□ -0.29
PKD1-213ENST00000480227 CCDC140Q96MF4 163 aa13.26□□□□□ -0.29
PKD1-213ENST00000480227 PMCHL2Q9BQD1 86 aa13.26□□□□□ -0.29
PKD1-213ENST00000480227 MAP1LC3CQ9BXW4 147 aa13.26□□□□□ -0.29
PKD1-213ENST00000480227 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP13.26□□□□□ -0.295e-8■■■■□ 19.5
PKD1-213ENST00000480227 LOC389332A0A1B0GUA5 103 aa13.25□□□□□ -0.29
PKD1-213ENST00000480227 D6R8Y8 96 aa13.25□□□□□ -0.29
PKD1-213ENST00000480227 OR5AL1P0C617 328 aa13.25□□□□□ -0.29
PKD1-213ENST00000480227 RNF182Q8N6D2 247 aa13.25□□□□□ -0.29
PKD1-213ENST00000480227 ZFAND3Q9H8U3 227 aa13.25□□□□□ -0.29
PKD1-213ENST00000480227 IGSF10Q6WRI0 2623 aa13.25□□□□□ -0.29
PKD1-213ENST00000480227 C20orf202A1L168 122 aa13.25□□□□□ -0.29
PKD1-213ENST00000480227 ERCC8Q13216 396 aa13.25□□□□□ -0.29
PKD1-213ENST00000480227 FAM106AQ4KMX7 169 aa13.25□□□□□ -0.29
PKD1-213ENST00000480227 GATD1Q8NB37 220 aa13.25□□□□□ -0.29
PKD1-213ENST00000480227 LINC00527Q9UJ94 153 aa13.25□□□□□ -0.29
PKD1-213ENST00000480227 IGHV3-49A0A0A0MS15 119 aa13.24□□□□□ -0.29
PKD1-213ENST00000480227 IFI27P40305 119 aaPredicted RBP13.24□□□□□ -0.29
PKD1-213ENST00000480227 ZNF493Q6ZR52 646 aa13.24□□□□□ -0.29
PKD1-213ENST00000480227 FA2HQ7L5A8 372 aa13.24□□□□□ -0.29
PKD1-213ENST00000480227 PRAC2D3DTV9 90 aa13.24□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms