RNA–Protein interactions for RNA: ENST00000480127.1

COL17A1-205, Transcript of collagen type XVII alpha 1 chain, humanhuman

TSL 3

Gene COL17A1, Length 420 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL17A1-205ENST00000480127 GUK1Q16774 197 aa5.02□□□□□ -1.61
COL17A1-205ENST00000480127 TMEM14EPQ6UXP3 125 aa5.02□□□□□ -1.61
COL17A1-205ENST00000480127 ZNF493Q6ZR52 646 aa5.02□□□□□ -1.61
COL17A1-205ENST00000480127 NRARPQ7Z6K4 114 aa5.02□□□□□ -1.61
COL17A1-205ENST00000480127 MAPKAPK5-AS1Q8N8E1 139 aa5.02□□□□□ -1.61
COL17A1-205ENST00000480127 ENKURQ8TC29 256 aa5.02□□□□□ -1.61
COL17A1-205ENST00000480127 BLNKQ8WV28 456 aa5.02□□□□□ -1.61
COL17A1-205ENST00000480127 MITD1Q8WV92 249 aa5.02□□□□□ -1.61
COL17A1-205ENST00000480127 DNAJC4Q9NNZ3 241 aa5.02□□□□□ -1.61
COL17A1-205ENST00000480127 HSPG2P98160 4391 aa5.02□□□□□ -1.61
COL17A1-205ENST00000480127 TRAV12-3A0A0B4J271 114 aa5.01□□□□□ -1.61
COL17A1-205ENST00000480127 A0A0J9YY99 117 aa5.01□□□□□ -1.61
COL17A1-205ENST00000480127 GAGE12BA1L429 117 aa5.01□□□□□ -1.61
COL17A1-205ENST00000480127 CBY3A6NI87 242 aa5.01□□□□□ -1.61
COL17A1-205ENST00000480127 GAGE7O76087 117 aa5.01□□□□□ -1.61
COL17A1-205ENST00000480127 TCRBP04435 133 aa5.01□□□□□ -1.61
COL17A1-205ENST00000480127 H2AFB2P0C5Z0 115 aa5.01□□□□□ -1.61
COL17A1-205ENST00000480127 GAGE12FP0CL80 117 aa5.01□□□□□ -1.61
COL17A1-205ENST00000480127 GAGE12GP0CL81 117 aa5.01□□□□□ -1.61
COL17A1-205ENST00000480127 GAGE12IP0CL82 117 aa5.01□□□□□ -1.61
COL17A1-205ENST00000480127 HIST1H1EP10412 219 aaKnown RBP5.01□□□□□ -1.61
COL17A1-205ENST00000480127 S100A11P31949 105 aa5.01□□□□□ -1.61
COL17A1-205ENST00000480127 PLP1P60201 277 aa5.01□□□□□ -1.61
COL17A1-205ENST00000480127 OPCMLQ14982 345 aa5.01□□□□□ -1.61
COL17A1-205ENST00000480127 MIC13Q5XKP0 118 aa5.01□□□□□ -1.61
COL17A1-205ENST00000480127 AMTNQ6UX39 209 aa5.01□□□□□ -1.61
COL17A1-205ENST00000480127 ZNF431Q8TF32 576 aaPredicted RBP5.01□□□□□ -1.61
COL17A1-205ENST00000480127 TMEM263Q8WUH6 116 aaKnown RBP5.01□□□□□ -1.61
COL17A1-205ENST00000480127 MGST2Q99735 147 aa5.01□□□□□ -1.61
COL17A1-205ENST00000480127 ARPC5LQ9BPX5 153 aa5.01□□□□□ -1.61
COL17A1-205ENST00000480127 SEC22CQ9BRL7 303 aa5.01□□□□□ -1.61
COL17A1-205ENST00000480127 ZNF331Q9NQX6 463 aaPredicted RBP5.01□□□□□ -1.61
COL17A1-205ENST00000480127 KCNIP2Q9NS61 270 aa5.01□□□□□ -1.61
COL17A1-205ENST00000480127 NDUFA13Q9P0J0 144 aa5.01□□□□□ -1.61
COL17A1-205ENST00000480127 TRAV26-1A0A087WT03 109 aa5□□□□□ -1.61
COL17A1-205ENST00000480127 TRGV1A0A0A0MS02 117 aa5□□□□□ -1.61
COL17A1-205ENST00000480127 FAM24AA6NFZ4 105 aa5□□□□□ -1.61
COL17A1-205ENST00000480127 C16orf90A8MZG2 172 aa5□□□□□ -1.61
COL17A1-205ENST00000480127 K7EPK0 472 aa5□□□□□ -1.61
COL17A1-205ENST00000480127 RGS13O14921 159 aa5□□□□□ -1.61
COL17A1-205ENST00000480127 GPX1P07203 203 aa5□□□□□ -1.61
COL17A1-205ENST00000480127 AZU1P20160 251 aa5□□□□□ -1.61
COL17A1-205ENST00000480127 M6PRP20645 277 aa5□□□□□ -1.61
COL17A1-205ENST00000480127 RNASE4P34096 147 aaKnown RBP5□□□□□ -1.61
COL17A1-205ENST00000480127 CSN1S1P47710 185 aa5□□□□□ -1.61
COL17A1-205ENST00000480127 SULT1A1P50225 295 aa5□□□□□ -1.61
COL17A1-205ENST00000480127 LRRC37A5PQ49AS3 106 aa5□□□□□ -1.61
COL17A1-205ENST00000480127 TTC32Q5I0X7 151 aa5□□□□□ -1.61
COL17A1-205ENST00000480127 TMEM78Q5T7P6 136 aa5□□□□□ -1.61
COL17A1-205ENST00000480127 SSX7Q7RTT5 188 aa5□□□□□ -1.61
COL17A1-205ENST00000480127 C2orf50Q96LR7 162 aa5□□□□□ -1.61
COL17A1-205ENST00000480127 C17orf77Q96MU5 243 aa5□□□□□ -1.61
COL17A1-205ENST00000480127 C20orf144Q9BQM9 153 aa5□□□□□ -1.61
COL17A1-205ENST00000480127 PARD6GQ9BYG4 376 aaPredicted RBP5□□□□□ -1.61
COL17A1-205ENST00000480127 SLC25A31Q9H0C2 315 aa5□□□□□ -1.61
COL17A1-205ENST00000480127 SLC39A9Q9NUM3 307 aa5□□□□□ -1.61
COL17A1-205ENST00000480127 TRAV5A0A0B4J249 113 aa4.99□□□□□ -1.61
COL17A1-205ENST00000480127 C17orf112F2Z3M2 114 aa4.99□□□□□ -1.61
COL17A1-205ENST00000480127 SLC17A3O00476 420 aa4.99□□□□□ -1.61
COL17A1-205ENST00000480127 CRXO43186 299 aaPredicted RBP4.99□□□□□ -1.61
COL17A1-205ENST00000480127 SSNA1O43805 119 aa4.99□□□□□ -1.61
COL17A1-205ENST00000480127 OR7C2O60412 319 aa4.99□□□□□ -1.61
COL17A1-205ENST00000480127 MPDU1O75352 247 aa4.99□□□□□ -1.61
COL17A1-205ENST00000480127 TNP2Q05952 138 aa4.99□□□□□ -1.61
COL17A1-205ENST00000480127 GFI1BQ5VTD9 330 aa4.99□□□□□ -1.61
COL17A1-205ENST00000480127 FAM122CQ6P4D5 195 aa4.99□□□□□ -1.61
COL17A1-205ENST00000480127 PATE2Q6UY27 113 aa4.99□□□□□ -1.61
COL17A1-205ENST00000480127 Q8N1X5 172 aa4.99□□□□□ -1.61
COL17A1-205ENST00000480127 C6orf223Q8N319 242 aa4.99□□□□□ -1.61
COL17A1-205ENST00000480127 ZNF680Q8NEM1 530 aa4.99□□□□□ -1.61
COL17A1-205ENST00000480127 THAP6Q8TBB0 222 aa4.99□□□□□ -1.61
COL17A1-205ENST00000480127 RNF141Q8WVD5 230 aa4.99□□□□□ -1.61
COL17A1-205ENST00000480127 S100ZQ8WXG8 99 aa4.99□□□□□ -1.61
COL17A1-205ENST00000480127 CCDC32Q9BV29 185 aa4.99□□□□□ -1.61
COL17A1-205ENST00000480127 RBM38Q9H0Z9 239 aaKnown RBP4.99□□□□□ -1.61
COL17A1-205ENST00000480127 PRELID1Q9Y255 219 aa4.99□□□□□ -1.61
COL17A1-205ENST00000480127 NBDYA0A0U1RRE5 68 aa4.98□□□□□ -1.61
COL17A1-205ENST00000480127 C7orf71A4D174 169 aa4.98□□□□□ -1.61
COL17A1-205ENST00000480127 EREGO14944 169 aa4.98□□□□□ -1.61
COL17A1-205ENST00000480127 IFNA5P01569 189 aa4.98□□□□□ -1.61
COL17A1-205ENST00000480127 PET100P0DJ07 73 aa4.98□□□□□ -1.61
COL17A1-205ENST00000480127 BTCP35070 178 aa4.98□□□□□ -1.61
COL17A1-205ENST00000480127 ARL16Q0P5N6 197 aa4.98□□□□□ -1.61
COL17A1-205ENST00000480127 RAB32Q13637 225 aa4.98□□□□□ -1.61
COL17A1-205ENST00000480127 ICAM4Q14773 271 aa4.98□□□□□ -1.61
COL17A1-205ENST00000480127 ATP6V1FQ16864 119 aa4.98□□□□□ -1.61
COL17A1-205ENST00000480127 SCGB1C1Q8TD33 95 aa4.98□□□□□ -1.61
COL17A1-205ENST00000480127 PCNPQ8WW12 178 aaKnown RBP4.98□□□□□ -1.61
COL17A1-205ENST00000480127 TMEM37Q8WXS4 190 aa4.98□□□□□ -1.61
COL17A1-205ENST00000480127 PYGO2Q9BRQ0 406 aa4.98□□□□□ -1.61
COL17A1-205ENST00000480127 LYRM2Q9NU23 88 aaPredicted RBP4.98□□□□□ -1.61
COL17A1-205ENST00000480127 PTTG2Q9NZH5 202 aa4.98□□□□□ -1.61
COL17A1-205ENST00000480127 RPH3ALQ9UNE2 315 aa4.98□□□□□ -1.61
COL17A1-205ENST00000480127 IGSF23A1L1A6 192 aa4.97□□□□□ -1.61
COL17A1-205ENST00000480127 A8MTW9 85 aa4.97□□□□□ -1.61
COL17A1-205ENST00000480127 PRAC2D3DTV9 90 aa4.97□□□□□ -1.61
COL17A1-205ENST00000480127 E5RGE8 158 aa4.97□□□□□ -1.61
COL17A1-205ENST00000480127 H3BQ15 152 aa4.97□□□□□ -1.61
COL17A1-205ENST00000480127 IGHV3-53P01767 116 aa4.97□□□□□ -1.61
COL17A1-205ENST00000480127 SLC25A5P05141 298 aaKnown RBP4.97□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms